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The map label for this gene is ydjA [H]

Identifier: 110633365

GI number: 110633365

Start: 1108732

End: 1109370

Strand: Direct

Name: ydjA [H]

Synonym: Meso_1011

Alternate gene names: 110633365

Gene position: 1108732-1109370 (Clockwise)

Preceding gene: 110633361

Following gene: 110633368

Centisome position: 25.13

GC content: 59.78

Gene sequence:

>639_bases
ATGCGAGCTTTGCCTCGCGAAGGTTTCGGCTGCCCTTCCACCACAGGAGATGTGTTCTTGAGCAATGCAGTGATCGACCT
TTTGCTTGAGCGCCGTTCGGCGCCGATCCACGAGCTTGCCGCGCCCGCCCCGTCGGATCGTGAGCTCGATATCATTTTGC
GGGCCGCCACCCGTGTGCCCGATCATGGCCAGCTCACGCCATGGCGTTTCATTCTTTATCGTGGCGAGGCACGCGAGCGC
GTCGGTCATTTGCTCGCAGAGCTTGCGGAAAAGCGCGAAGGACCGCTAAACGATGCGCGCCGACAGCAGGAACTGACGCG
TTTTTCACGCGCGCCGCTCGTCATCGGAGTGGTCTCGAGCCCCAAGGAAAGCATCAAAATTCCGCAATGGGAGATGTTTC
TTTCGGGCGGCATGGTGGCCATGAACCTCATGATCGCCGCGAGAGCAGTGGGTTATCACACCAACATGATCACCAACTGG
TACTCGGATGTCGAGGAGGGCCGGCGGATTTTGGGGATCGCGCCGCACGAACGGGTGATCGGCTTCGTGCATATCGGCAA
GCACCATGGAAATACGCCAGACCGACCAAGACCCGATGTGGCGAGCCTGGTCAGCGATTATCAAGGGCCGTGGGAGTAG

Upstream 100 bases:

>100_bases
GAACCCCCGCTGCAAGGAAGGATATCACTATGATTCGTTTGGCCACCAACCACATGCTTGCCATGAAGCCCAAGCCGGTG
GCAATTTCAAGACTGCAGCC

Downstream 100 bases:

>100_bases
CGGAGTAAGGTAGTAAGGGAATAGCGCAGTAAGGCAGTAGCGGAAAATTTTTCGCAGCTGCTGGCGACCGTTGTGACCCC
ACTTACTGCCTGCTGCCGTA

Product: nitroreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MRALPREGFGCPSTTGDVFLSNAVIDLLLERRSAPIHELAAPAPSDRELDIILRAATRVPDHGQLTPWRFILYRGEARER
VGHLLAELAEKREGPLNDARRQQELTRFSRAPLVIGVVSSPKESIKIPQWEMFLSGGMVAMNLMIAARAVGYHTNMITNW
YSDVEEGRRILGIAPHERVIGFVHIGKHHGNTPDRPRPDVASLVSDYQGPWE

Sequences:

>Translated_212_residues
MRALPREGFGCPSTTGDVFLSNAVIDLLLERRSAPIHELAAPAPSDRELDIILRAATRVPDHGQLTPWRFILYRGEARER
VGHLLAELAEKREGPLNDARRQQELTRFSRAPLVIGVVSSPKESIKIPQWEMFLSGGMVAMNLMIAARAVGYHTNMITNW
YSDVEEGRRILGIAPHERVIGFVHIGKHHGNTPDRPRPDVASLVSDYQGPWE
>Mature_212_residues
MRALPREGFGCPSTTGDVFLSNAVIDLLLERRSAPIHELAAPAPSDRELDIILRAATRVPDHGQLTPWRFILYRGEARER
VGHLLAELAEKREGPLNDARRQQELTRFSRAPLVIGVVSSPKESIKIPQWEMFLSGGMVAMNLMIAARAVGYHTNMITNW
YSDVEEGRRILGIAPHERVIGFVHIGKHHGNTPDRPRPDVASLVSDYQGPWE

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=164, Percent_Identity=34.1463414634146, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 23741; Mature: 23741

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALPREGFGCPSTTGDVFLSNAVIDLLLERRSAPIHELAAPAPSDRELDIILRAATRVP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHEEHHHCCC
DHGQLTPWRFILYRGEARERVGHLLAELAEKREGPLNDARRQQELTRFSRAPLVIGVVSS
CCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCC
PKESIKIPQWEMFLSGGMVAMNLMIAARAVGYHTNMITNWYSDVEEGRRILGIAPHERVI
CHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHEE
GFVHIGKHHGNTPDRPRPDVASLVSDYQGPWE
EEEEECCCCCCCCCCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MRALPREGFGCPSTTGDVFLSNAVIDLLLERRSAPIHELAAPAPSDRELDIILRAATRVP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHEEHHHCCC
DHGQLTPWRFILYRGEARERVGHLLAELAEKREGPLNDARRQQELTRFSRAPLVIGVVSS
CCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCC
PKESIKIPQWEMFLSGGMVAMNLMIAARAVGYHTNMITNWYSDVEEGRRILGIAPHERVI
CHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHEE
GFVHIGKHHGNTPDRPRPDVASLVSDYQGPWE
EEEEECCCCCCCCCCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]