| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is gsiC [H]
Identifier: 110633352
GI number: 110633352
Start: 1095218
End: 1096144
Strand: Reverse
Name: gsiC [H]
Synonym: Meso_0998
Alternate gene names: 110633352
Gene position: 1096144-1095218 (Counterclockwise)
Preceding gene: 110633353
Following gene: 110633351
Centisome position: 24.84
GC content: 63.32
Gene sequence:
>927_bases ATGGTTCAGTTCGTCCTCACGAGGCTCCTCCGGGCTGTCATCACGATTGCCGCCGTCGTCACCTTCGCATTTGTCGTGCT GCGCATGTCGGGCGATCCGGCACAGGTGATGCTCGGCCCCGACGTGCCGCAGGAGTCGGTCGACGCTTTCCGCCGCGCCT GGGGGCTCGATCAGCCGCTCTGGGTACAATACTTCGCCTATCTCAAATCGATCCTCACAGGCGATTTCGGCGTCTCGATG CGCGACAAGGCCCCAGCCATCCAACTGGTGCTGGAACGCGTGCCTGCCACGCTGCAGCTGACGCTTCCAGCCCTCTTCCT GAAGCTCCTGATTGGCATTCCGGCCGGCGTCTATGCCGCCCTGCACCGGCAGAGCGTCACGGATCGCGGCGTGATCCTGG CTTCGATCATCGGCTTCACGATACCGTCCTTCGTGTTGGGGTTGCTCCTCGTGCTGATCTTCTCGGTGACGTTCGGCGTG CTGCCGTCAGGAGGACAGGACACCTGGATGCACGGCATCCTCCCGACGCTTACCTTGAGCATCGGCGGCATCGGCATTCT CGCCCGCTTTTCGCGTAGCGCCATGATCGAGGTGATGGGCCAGCCATTCATCCGCACGGCTTCGGCCAAGGGCCTGAAAT GGCGCGAGGTCGTCTGGGGGCACGCGCTGCCCAATGCCGCGATCCCGATCGTCACGATAGTGGGCTTCATGGTTGGTTCG CTCATCGCCGGCGCCGTGGTGGTGGAATCGATCTTCTCATGGCCGGGGATCGGCAGGCTGCTGGTCGTATCTGTCACGAA CCGCGACCTCGCCGTCGTGCAGTGTATCCTCCTCATCATCGCAGCCGCCATGGTGATTTCCAACCTGGTTGTGGACCTCC TCTACGGCTGGCTCGACCCGCGACTGCGCGCGCATGTCGCGCATTAG
Upstream 100 bases:
>100_bases CGCACCAGAACGCCTGAGCTGCGCCGGATCGAGACGGGCCGCACGGCCGCCTGCCACCTCTTGGCGAATGACCTCGCCGT GGCAGCCTAAGGAAACAGAA
Downstream 100 bases:
>100_bases GTAACAGGAAGAAGGCATGTCCTCGGCAGATCTGACCCAAACGCAACAGACGCCACGCCCGGCTTTCGGCATTCTGGCCC GCATTCGCCGTCAGGTGCCG
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MVQFVLTRLLRAVITIAAVVTFAFVVLRMSGDPAQVMLGPDVPQESVDAFRRAWGLDQPLWVQYFAYLKSILTGDFGVSM RDKAPAIQLVLERVPATLQLTLPALFLKLLIGIPAGVYAALHRQSVTDRGVILASIIGFTIPSFVLGLLLVLIFSVTFGV LPSGGQDTWMHGILPTLTLSIGGIGILARFSRSAMIEVMGQPFIRTASAKGLKWREVVWGHALPNAAIPIVTIVGFMVGS LIAGAVVVESIFSWPGIGRLLVVSVTNRDLAVVQCILLIIAAAMVISNLVVDLLYGWLDPRLRAHVAH
Sequences:
>Translated_308_residues MVQFVLTRLLRAVITIAAVVTFAFVVLRMSGDPAQVMLGPDVPQESVDAFRRAWGLDQPLWVQYFAYLKSILTGDFGVSM RDKAPAIQLVLERVPATLQLTLPALFLKLLIGIPAGVYAALHRQSVTDRGVILASIIGFTIPSFVLGLLLVLIFSVTFGV LPSGGQDTWMHGILPTLTLSIGGIGILARFSRSAMIEVMGQPFIRTASAKGLKWREVVWGHALPNAAIPIVTIVGFMVGS LIAGAVVVESIFSWPGIGRLLVVSVTNRDLAVVQCILLIIAAAMVISNLVVDLLYGWLDPRLRAHVAH >Mature_308_residues MVQFVLTRLLRAVITIAAVVTFAFVVLRMSGDPAQVMLGPDVPQESVDAFRRAWGLDQPLWVQYFAYLKSILTGDFGVSM RDKAPAIQLVLERVPATLQLTLPALFLKLLIGIPAGVYAALHRQSVTDRGVILASIIGFTIPSFVLGLLLVLIFSVTFGV LPSGGQDTWMHGILPTLTLSIGGIGILARFSRSAMIEVMGQPFIRTASAKGLKWREVVWGHALPNAAIPIVTIVGFMVGS LIAGAVVVESIFSWPGIGRLLVVSVTNRDLAVVQCILLIIAAAMVISNLVVDLLYGWLDPRLRAHVAH
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787053, Length=304, Percent_Identity=39.4736842105263, Blast_Score=233, Evalue=9e-63, Organism=Escherichia coli, GI1789888, Length=310, Percent_Identity=39.6774193548387, Blast_Score=217, Evalue=6e-58, Organism=Escherichia coli, GI1789965, Length=337, Percent_Identity=36.2017804154303, Blast_Score=211, Evalue=4e-56, Organism=Escherichia coli, GI1787497, Length=310, Percent_Identity=36.7741935483871, Blast_Score=192, Evalue=2e-50, Organism=Escherichia coli, GI1787761, Length=325, Percent_Identity=37.5384615384615, Blast_Score=171, Evalue=5e-44, Organism=Escherichia coli, GI1787550, Length=272, Percent_Identity=29.0441176470588, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1788504, Length=284, Percent_Identity=27.112676056338, Blast_Score=108, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 33223; Mature: 33223
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQFVLTRLLRAVITIAAVVTFAFVVLRMSGDPAQVMLGPDVPQESVDAFRRAWGLDQPL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCHH WVQYFAYLKSILTGDFGVSMRDKAPAIQLVLERVPATLQLTLPALFLKLLIGIPAGVYAA HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCHHHHHH LHRQSVTDRGVILASIIGFTIPSFVLGLLLVLIFSVTFGVLPSGGQDTWMHGILPTLTLS HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH IGGIGILARFSRSAMIEVMGQPFIRTASAKGLKWREVVWGHALPNAAIPIVTIVGFMVGS HCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH LIAGAVVVESIFSWPGIGRLLVVSVTNRDLAVVQCILLIIAAAMVISNLVVDLLYGWLDP HHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH RLRAHVAH HHHHHCCC >Mature Secondary Structure MVQFVLTRLLRAVITIAAVVTFAFVVLRMSGDPAQVMLGPDVPQESVDAFRRAWGLDQPL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCHH WVQYFAYLKSILTGDFGVSMRDKAPAIQLVLERVPATLQLTLPALFLKLLIGIPAGVYAA HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCHHHHHH LHRQSVTDRGVILASIIGFTIPSFVLGLLLVLIFSVTFGVLPSGGQDTWMHGILPTLTLS HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH IGGIGILARFSRSAMIEVMGQPFIRTASAKGLKWREVVWGHALPNAAIPIVTIVGFMVGS HCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH LIAGAVVVESIFSWPGIGRLLVVSVTNRDLAVVQCILLIIAAAMVISNLVVDLLYGWLDP HHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH RLRAHVAH HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA