Definition Mesorhizobium sp. BNC1, complete genome.
Accession NC_008254
Length 4,412,446

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The map label for this gene is 110633349

Identifier: 110633349

GI number: 110633349

Start: 1092597

End: 1093511

Strand: Reverse

Name: 110633349

Synonym: Meso_0995

Alternate gene names: NA

Gene position: 1093511-1092597 (Counterclockwise)

Preceding gene: 110633350

Following gene: 110633346

Centisome position: 24.78

GC content: 62.73

Gene sequence:

>915_bases
ATGGCCAATATCATCGCGACGGGCTTCAATGCCGGTTCTATCGACGGGGAGCTCTTCAGCCTCGAGGCAGAGCTGCGGCG
GCTGGCCGAGATCGGCGTTGACACGGTCGAGCTGGGGCTGACCAGCATCGACCTCATCAGCGGCGGCCGCATCATCAGGG
AACGGGCGGAGAGGCTGAAGGCGCTCACGGCGCAATTTCCCTTCCGCTATACCGTTCACGGCCTGGTTTCCTCGAACTTC
ATGGATCCTGCGACCCTGCGCTACCAGATGGATGCCGCCAAGGCGCTGATCGAGATCTGTGACCAGATCGATGCCCGGAT
AATCGTCCAGCATGGCGGGCATCTGCGCGCGGACCAGCTCTTCGACCGCGCGGCGGCGGATGAGCGCGAACGCGAGGCGC
TGTTCGAGCTTGCCGAGTTCGCCCGTCCTTATGATGTGCGCATTGCGTTCGAGAACATATTCACCACCGAGCCGGGGCAA
TACCGCCAGACGCCGGCCGAGGTTGCGGCCACGGTGAAGGCGGTCAACCACCCCAATCTCGTGGCGCTGATCGATTTCAG
CCACGCCTACATCGAGTCCACCTATCGCGGGCTGGATTTCCGCGAGCAGCTGCGGGCCATGGCGCCGGTTGCCGGGCACC
TGCACGTGCACGATTCTTTCGGCCGCCCGATCGGCTTTTACAAGCCGTACCATCTCCAGGAAGCCACCGCGCTGGGACTG
GGCGACCTGCACCTGCCGCTTGGCTGGGGAGATATGGACTGGGAAGACATCTTCAGCGAGCTGGAGTTCCTGCCGGGCAC
TGTGATGATGATGGAGATCAATCATCGCTATCGCAGCGAGCAACCCGCTAGTCTCGAACGCGCCCAGCAGCTGATGGCGT
TGAACGCCCGACGCATTTCAATCGCAGCGGAATGA

Upstream 100 bases:

>100_bases
CAGCCCGACCTTGCGCTCTCCCTACGGGCTTCGCTTCAGAAGTCATCCAACCCCGCAATGGCTGGATAAGCCAGCCTCCC
TAATCCATCGGAGACAGACA

Downstream 100 bases:

>100_bases
CAGAGTGCTAGTGCCACCTTGCAAGCGAGGGTGACGAGCCTTGCAAACCTGCCGCCTGGCAGGCTCTGGCGGCAGGACAC
GAGGCGGAGCTTCGGATTCA

Product: xylose isomerase-like TIM barrel

Products: NA

Alternate protein names: Xylose Isomerase Domain-Containing Protein; Xylose Isomerase Domain-Containing Protein TIM Barrel; Xylose Isomerase-Like TIM Barrel; Myo-Inositol Catabolism Protein; Xylose Isomerase-Like Protein

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MANIIATGFNAGSIDGELFSLEAELRRLAEIGVDTVELGLTSIDLISGGRIIRERAERLKALTAQFPFRYTVHGLVSSNF
MDPATLRYQMDAAKALIEICDQIDARIIVQHGGHLRADQLFDRAAADEREREALFELAEFARPYDVRIAFENIFTTEPGQ
YRQTPAEVAATVKAVNHPNLVALIDFSHAYIESTYRGLDFREQLRAMAPVAGHLHVHDSFGRPIGFYKPYHLQEATALGL
GDLHLPLGWGDMDWEDIFSELEFLPGTVMMMEINHRYRSEQPASLERAQQLMALNARRISIAAE

Sequences:

>Translated_304_residues
MANIIATGFNAGSIDGELFSLEAELRRLAEIGVDTVELGLTSIDLISGGRIIRERAERLKALTAQFPFRYTVHGLVSSNF
MDPATLRYQMDAAKALIEICDQIDARIIVQHGGHLRADQLFDRAAADEREREALFELAEFARPYDVRIAFENIFTTEPGQ
YRQTPAEVAATVKAVNHPNLVALIDFSHAYIESTYRGLDFREQLRAMAPVAGHLHVHDSFGRPIGFYKPYHLQEATALGL
GDLHLPLGWGDMDWEDIFSELEFLPGTVMMMEINHRYRSEQPASLERAQQLMALNARRISIAAE
>Mature_303_residues
ANIIATGFNAGSIDGELFSLEAELRRLAEIGVDTVELGLTSIDLISGGRIIRERAERLKALTAQFPFRYTVHGLVSSNFM
DPATLRYQMDAAKALIEICDQIDARIIVQHGGHLRADQLFDRAAADEREREALFELAEFARPYDVRIAFENIFTTEPGQY
RQTPAEVAATVKAVNHPNLVALIDFSHAYIESTYRGLDFREQLRAMAPVAGHLHVHDSFGRPIGFYKPYHLQEATALGLG
DLHLPLGWGDMDWEDIFSELEFLPGTVMMMEINHRYRSEQPASLERAQQLMALNARRISIAAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34156; Mature: 34025

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANIIATGFNAGSIDGELFSLEAELRRLAEIGVDTVELGLTSIDLISGGRIIRERAERLK
CCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCEEEEECCCCHHHHHHHHHHH
ALTAQFPFRYTVHGLVSSNFMDPATLRYQMDAAKALIEICDQIDARIIVQHGGHLRADQL
HHHHCCCCCEEEHHHHHCCCCCCHHHEEHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHH
FDRAAADEREREALFELAEFARPYDVRIAFENIFTTEPGQYRQTPAEVAATVKAVNHPNL
HHHHHCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCE
VALIDFSHAYIESTYRGLDFREQLRAMAPVAGHLHVHDSFGRPIGFYKPYHLQEATALGL
EEEEECHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHCCC
GDLHLPLGWGDMDWEDIFSELEFLPGTVMMMEINHRYRSEQPASLERAQQLMALNARRIS
CCEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECHHHCCCCCHHHHHHHHHHHHCCEEEE
IAAE
EECC
>Mature Secondary Structure 
ANIIATGFNAGSIDGELFSLEAELRRLAEIGVDTVELGLTSIDLISGGRIIRERAERLK
CCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCEEEEECCCCHHHHHHHHHHH
ALTAQFPFRYTVHGLVSSNFMDPATLRYQMDAAKALIEICDQIDARIIVQHGGHLRADQL
HHHHCCCCCEEEHHHHHCCCCCCHHHEEHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHH
FDRAAADEREREALFELAEFARPYDVRIAFENIFTTEPGQYRQTPAEVAATVKAVNHPNL
HHHHHCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCE
VALIDFSHAYIESTYRGLDFREQLRAMAPVAGHLHVHDSFGRPIGFYKPYHLQEATALGL
EEEEECHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHCCC
GDLHLPLGWGDMDWEDIFSELEFLPGTVMMMEINHRYRSEQPASLERAQQLMALNARRIS
CCEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECHHHCCCCCHHHHHHHHHHHHCCEEEE
IAAE
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA