| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633314
Identifier: 110633314
GI number: 110633314
Start: 1057808
End: 1058542
Strand: Reverse
Name: 110633314
Synonym: Meso_0960
Alternate gene names: NA
Gene position: 1058542-1057808 (Counterclockwise)
Preceding gene: 110633315
Following gene: 110633313
Centisome position: 23.99
GC content: 60.54
Gene sequence:
>735_bases ATGCCGACCCCTCCCCCTTCCTGCAGAGCTTACGCGGTGGCGCTGGCCCTGGCCGCGCTTTTCTGGCTGCCAGGCAAATC CCTCGCGCTGAACGATACTTTCCCTGAATACCGGCCAGTGCAGCAACAGCCTGGAGGAGCATCCGAAGGGAATCCCGACC TTCTGTCCGCGCCCACGCTTTCAGAGGAATCGGGTGAGGACTCCACAGTCGGCGCCGAGGAAAGGTCGGGAGATGTAGCG CGCCCCGACACCACTCCCGGCGAGGAGCCACCGGAGGTGATTTACGACCTCAGCCGCCTGCCCGAGCCAGTGCGCCGCAT GCGGCAGCTCATCATCGATGCCTGCAAGAGCGGTGACATTGAAAAGCTGAGGCCGCTTATCGGCAGCGGCGACAGCGCCA CCCAACTGCTGCTGGGCAATCTCGAAGGCGATCCGATCGATTTCCTCCGCCAGATCTCAGGCGACGAAGAAGGCCAGGAG ATCATGGCCATTCTGCTGGAGGTCATGGAATCCGGCTTCGTGCATCTCAATGCCGGTGCGGAGAACGAATACTATGTCTG GCCCTATTTCTTCGCCTTTCCGCTCGATGAGCTGTCACCGCAGCAGAAGGTGGAGCTTTTCACGCTGCTGACGGCGAGCG ATTATGAAGAGATGAAGAATTTCGGCGCTTACATTTTTTATCGCTCGGCCATCACGCCGGACGGGCGCTGGCTGTTCTTC GTGGCTGGAGACTGA
Upstream 100 bases:
>100_bases TTCCTGCCGCAACAGAGCCGCCATTGAGCTTGCGGCCCACTTTGGCTATTCGTGGGGCCGGGCCATCTACGGCTCGAAAC CGTCAACAAAGGTGGCGCGA
Downstream 100 bases:
>100_bases TACGGGTCCGCTTGCTCCGCACGCCAGGGAGGCTTACGTAGCAGAAAGCCGCCGAGACCGGATTCGATGCCATGCCGAGT GTTGAGCTTTCCGACCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MPTPPPSCRAYAVALALAALFWLPGKSLALNDTFPEYRPVQQQPGGASEGNPDLLSAPTLSEESGEDSTVGAEERSGDVA RPDTTPGEEPPEVIYDLSRLPEPVRRMRQLIIDACKSGDIEKLRPLIGSGDSATQLLLGNLEGDPIDFLRQISGDEEGQE IMAILLEVMESGFVHLNAGAENEYYVWPYFFAFPLDELSPQQKVELFTLLTASDYEEMKNFGAYIFYRSAITPDGRWLFF VAGD
Sequences:
>Translated_244_residues MPTPPPSCRAYAVALALAALFWLPGKSLALNDTFPEYRPVQQQPGGASEGNPDLLSAPTLSEESGEDSTVGAEERSGDVA RPDTTPGEEPPEVIYDLSRLPEPVRRMRQLIIDACKSGDIEKLRPLIGSGDSATQLLLGNLEGDPIDFLRQISGDEEGQE IMAILLEVMESGFVHLNAGAENEYYVWPYFFAFPLDELSPQQKVELFTLLTASDYEEMKNFGAYIFYRSAITPDGRWLFF VAGD >Mature_243_residues PTPPPSCRAYAVALALAALFWLPGKSLALNDTFPEYRPVQQQPGGASEGNPDLLSAPTLSEESGEDSTVGAEERSGDVAR PDTTPGEEPPEVIYDLSRLPEPVRRMRQLIIDACKSGDIEKLRPLIGSGDSATQLLLGNLEGDPIDFLRQISGDEEGQEI MAILLEVMESGFVHLNAGAENEYYVWPYFFAFPLDELSPQQKVELFTLLTASDYEEMKNFGAYIFYRSAITPDGRWLFFV AGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26869; Mature: 26738
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPPPSCRAYAVALALAALFWLPGKSLALNDTFPEYRPVQQQPGGASEGNPDLLSAPTL CCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCC SEESGEDSTVGAEERSGDVARPDTTPGEEPPEVIYDLSRLPEPVRRMRQLIIDACKSGDI CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCH EKLRPLIGSGDSATQLLLGNLEGDPIDFLRQISGDEEGQEIMAILLEVMESGFVHLNAGA HHHHHHHCCCCCHHHHEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCC ENEYYVWPYFFAFPLDELSPQQKVELFTLLTASDYEEMKNFGAYIFYRSAITPDGRWLFF CCCEEEEHHHEECCHHHCCHHHHHHHHHEECCCCHHHHHHCCEEEEEECCCCCCCCEEEE VAGD EECC >Mature Secondary Structure PTPPPSCRAYAVALALAALFWLPGKSLALNDTFPEYRPVQQQPGGASEGNPDLLSAPTL CCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCC SEESGEDSTVGAEERSGDVARPDTTPGEEPPEVIYDLSRLPEPVRRMRQLIIDACKSGDI CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCH EKLRPLIGSGDSATQLLLGNLEGDPIDFLRQISGDEEGQEIMAILLEVMESGFVHLNAGA HHHHHHHCCCCCHHHHEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCC ENEYYVWPYFFAFPLDELSPQQKVELFTLLTASDYEEMKNFGAYIFYRSAITPDGRWLFF CCCEEEEHHHEECCHHHCCHHHHHHHHHEECCCCHHHHHHCCEEEEEECCCCCCCCEEEE VAGD EECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA