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The map label for this gene is omp [H]

Identifier: 110633250

GI number: 110633250

Start: 986582

End: 987007

Strand: Direct

Name: omp [H]

Synonym: Meso_0896

Alternate gene names: 110633250

Gene position: 986582-987007 (Clockwise)

Preceding gene: 110633249

Following gene: 110633251

Centisome position: 22.36

GC content: 63.62

Gene sequence:

>426_bases
ATGAAGATATCAGCTGTTGTCGCCATGACGGCATTCCTGCTTTCCGGATGCGCCGCCGGCGGCTTCTCCCGCTCTATCGA
TGTCACGGCGACGTCGGGACAGGGTTCTGTCCGCGCAATCGGAGGCATTGTCGGCGGCGGGCTGATAATGGGAAATTTGG
GGACCGACCTCCAGCGCCGTGAGCGTATGGCGGGAGTGGATGCCGAATACAAAGCGCTCGAGTCCGCGCCGGCAGGGCAA
TCTGTGACCTGGCGTGATGAACGCACCGGACGCAGTGGAACGGTGACTGCTTCGCAGCCCTACCGTGTCGGCTCCCAGGA
CTGCCGCCCCTACTCACATACGATTTCGGCGTCTGCTGGCGGTACGCGAACCTCGCGCGGCACGGCCTGCCGCAATCCGG
ACGGAAGCTGGACGCTGCTGGAATAG

Upstream 100 bases:

>100_bases
TTGCCCGCGGCATGAGGTGGAGGCGGGAACGCGTGGACAAAATTCGGTCAAACATGAGCTATAGTCGCGGCGCTGTTTCG
GCGGCGGAGGGTGAGAGCGT

Downstream 100 bases:

>100_bases
GCAGTCTCGGGCCTGAATCAGGCAGGGTGCTCTTTGCCGGCAGTGACGGCAGCGGAAAATGCCGCATCGGTCGGCAGTTG
GCACCGCGCGGCAAGACGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MKISAVVAMTAFLLSGCAAGGFSRSIDVTATSGQGSVRAIGGIVGGGLIMGNLGTDLQRRERMAGVDAEYKALESAPAGQ
SVTWRDERTGRSGTVTASQPYRVGSQDCRPYSHTISASAGGTRTSRGTACRNPDGSWTLLE

Sequences:

>Translated_141_residues
MKISAVVAMTAFLLSGCAAGGFSRSIDVTATSGQGSVRAIGGIVGGGLIMGNLGTDLQRRERMAGVDAEYKALESAPAGQ
SVTWRDERTGRSGTVTASQPYRVGSQDCRPYSHTISASAGGTRTSRGTACRNPDGSWTLLE
>Mature_141_residues
MKISAVVAMTAFLLSGCAAGGFSRSIDVTATSGQGSVRAIGGIVGGGLIMGNLGTDLQRRERMAGVDAEYKALESAPAGQ
SVTWRDERTGRSGTVTASQPYRVGSQDCRPYSHTISASAGGTRTSRGTACRNPDGSWTLLE

Specific function: Unknown

COG id: COG4520

COG function: function code M; Surface antigen

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rickettsiale 17 kDa surface antigen family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008816
- InterPro:   IPR016364 [H]

Pfam domain/function: PF05433 Rick_17kDa_Anti [H]

EC number: NA

Molecular weight: Translated: 14545; Mature: 14545

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISAVVAMTAFLLSGCAAGGFSRSIDVTATSGQGSVRAIGGIVGGGLIMGNLGTDLQRR
CCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEECHHHCCCEEECCCCCCHHHH
ERMAGVDAEYKALESAPAGQSVTWRDERTGRSGTVTASQPYRVGSQDCRPYSHTISASAG
HHHCCCCHHHHHHHCCCCCCCEEECCCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCC
GTRTSRGTACRNPDGSWTLLE
CCCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure
MKISAVVAMTAFLLSGCAAGGFSRSIDVTATSGQGSVRAIGGIVGGGLIMGNLGTDLQRR
CCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEECHHHCCCEEECCCCCCHHHH
ERMAGVDAEYKALESAPAGQSVTWRDERTGRSGTVTASQPYRVGSQDCRPYSHTISASAG
HHHCCCCHHHHHHHCCCCCCCEEECCCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCC
GTRTSRGTACRNPDGSWTLLE
CCCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA