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The map label for this gene is chvE [H]

Identifier: 110633195

GI number: 110633195

Start: 930054

End: 931121

Strand: Direct

Name: chvE [H]

Synonym: Meso_0838

Alternate gene names: 110633195

Gene position: 930054-931121 (Clockwise)

Preceding gene: 110633192

Following gene: 110633196

Centisome position: 21.08

GC content: 59.93

Gene sequence:

>1068_bases
ATGAAAAAGATTGCATCCATATTCGCTTCGCTTGCGCTGGGGGCCACTCTGCTCACCGGAGTGGTCCAGGCACAGGAGAA
GGGGCTGATCGGCATCGCCATGCCGACGAAATCTTCGGCCCGCTGGATCTCCGATGGAAATTCGATGGTCGAGCAGTTCA
AGGCCGCGGGCTATGAGACCGATCTTCAGTATGCCGAGGACGACATCCCGAACCAGCTCGCGCAGATCGAGAACATGATA
ACCAAGGGCGTCAATGTCCTGGTGATCGCGGCGATCGACGGCACGACGCTCTCGAACGCACTGGAGAATGCCAACGCGGC
GGACATCAAGGTAATCGCCTATGATCGCCTGATCCGTGACAGCGAGCATGTCGACTACTACGCCACCTTCGACAATTTCC
AGGTCGGCGTGCAGCAGGCGACCTCGCTGGTGGACGGTCTGAAGGAACGCTTCCCCGACCAGAAGCCCTGGAACATCGAG
CTTTTCGGCGGCTCGCCCGACGATAACAACGCCTATTTCTTCTATGATGGCGCCATGTCGGTCCTGCAGCCGCTGATCGA
TTCCGGCGAAATCACCGTCCCGTCCGGCCAGATGGGCATGGACAAGGTCGGCACCCTGCGCTGGGACGGCGCGGTGGCCC
AGTCGCGCATGGATAACCTGCTTTCCGCCTATTACACGGACAAGGAAGTCAACGGCGTGCTTTCGCCCTATGACGGCCTC
TCCATCGGCATTCTCTCCTCGCTCAAGGGCGTGGGCTACGGGTCCGGCGACCTGAAGATGCCGATCGTCACGGGCCAGGA
TGCCGAGGTTCCCTCGGTCAAGTCGATCCTCGCCGATGAGCAGTATTCGACCATCTTCAAGGACACGCGCGAGCTTGCCC
GCGTGACCGTCGGCATGGTCGATGCGTTGCTCCAGGGCGGCGAGCCGGAGATCAACGACACGAAAACCTACGACAATGGC
GTCAAGGTCGTGCCGTCCTATCTGCTGAAGCCCGTGCTGGTCGATAAGTCCAACTGGGAAGAGGTGCTGATCGGCAGCGG
TTACTACACCAAGGACCAGATCCAATAG

Upstream 100 bases:

>100_bases
GTTTCGCCAACGGATCAGGTGATCCGGCTTGTTCTTGAACGCCACCAGGGGGAGCGCCTGATATCGCCATGGGGCCGCGC
CCTGGCATTGGGAGGAAGAA

Downstream 100 bases:

>100_bases
TGGGAACGAGCGAACTCGGCTTAAAGAGCCGGATTCCGTAAATGGTTTGCAACAGCGACCCCCTCTCTTGCGATTTCTAA
CACTTAGCTGCGCTAATGTG

Product: putative sugar uptake ABC transporter periplasmic solute-binding protein precursor

Products: ADP; phosphate; xylose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MKKIASIFASLALGATLLTGVVQAQEKGLIGIAMPTKSSARWISDGNSMVEQFKAAGYETDLQYAEDDIPNQLAQIENMI
TKGVNVLVIAAIDGTTLSNALENANAADIKVIAYDRLIRDSEHVDYYATFDNFQVGVQQATSLVDGLKERFPDQKPWNIE
LFGGSPDDNNAYFFYDGAMSVLQPLIDSGEITVPSGQMGMDKVGTLRWDGAVAQSRMDNLLSAYYTDKEVNGVLSPYDGL
SIGILSSLKGVGYGSGDLKMPIVTGQDAEVPSVKSILADEQYSTIFKDTRELARVTVGMVDALLQGGEPEINDTKTYDNG
VKVVPSYLLKPVLVDKSNWEEVLIGSGYYTKDQIQ

Sequences:

>Translated_355_residues
MKKIASIFASLALGATLLTGVVQAQEKGLIGIAMPTKSSARWISDGNSMVEQFKAAGYETDLQYAEDDIPNQLAQIENMI
TKGVNVLVIAAIDGTTLSNALENANAADIKVIAYDRLIRDSEHVDYYATFDNFQVGVQQATSLVDGLKERFPDQKPWNIE
LFGGSPDDNNAYFFYDGAMSVLQPLIDSGEITVPSGQMGMDKVGTLRWDGAVAQSRMDNLLSAYYTDKEVNGVLSPYDGL
SIGILSSLKGVGYGSGDLKMPIVTGQDAEVPSVKSILADEQYSTIFKDTRELARVTVGMVDALLQGGEPEINDTKTYDNG
VKVVPSYLLKPVLVDKSNWEEVLIGSGYYTKDQIQ
>Mature_355_residues
MKKIASIFASLALGATLLTGVVQAQEKGLIGIAMPTKSSARWISDGNSMVEQFKAAGYETDLQYAEDDIPNQLAQIENMI
TKGVNVLVIAAIDGTTLSNALENANAADIKVIAYDRLIRDSEHVDYYATFDNFQVGVQQATSLVDGLKERFPDQKPWNIE
LFGGSPDDNNAYFFYDGAMSVLQPLIDSGEITVPSGQMGMDKVGTLRWDGAVAQSRMDNLLSAYYTDKEVNGVLSPYDGL
SIGILSSLKGVGYGSGDLKMPIVTGQDAEVPSVKSILADEQYSTIFKDTRELARVTVGMVDALLQGGEPEINDTKTYDNG
VKVVPSYLLKPVLVDKSNWEEVLIGSGYYTKDQIQ

Specific function: Required for effective transcriptional induction of the vir genes by monosaccharides in response to plant signals and for normal growth and chemotaxis towards certain sugars. Function as a periplasmic multiple sugar-binding receptor protein. It does not i

COG id: COG4213

COG function: function code G; ABC-type xylose transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1789990, Length=328, Percent_Identity=35.9756097560976, Blast_Score=169, Evalue=3e-43,

Paralogues:

None

Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 38515; Mature: 38515

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIASIFASLALGATLLTGVVQAQEKGLIGIAMPTKSSARWISDGNSMVEQFKAAGYET
CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCC
DLQYAEDDIPNQLAQIENMITKGVNVLVIAAIDGTTLSNALENANAADIKVIAYDRLIRD
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHCCCCCCEEEEEEHHHHHCC
SEHVDYYATFDNFQVGVQQATSLVDGLKERFPDQKPWNIELFGGSPDDNNAYFFYDGAMS
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEECCHHH
VLQPLIDSGEITVPSGQMGMDKVGTLRWDGAVAQSRMDNLLSAYYTDKEVNGVLSPYDGL
HHHHHHCCCCEECCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCC
SIGILSSLKGVGYGSGDLKMPIVTGQDAEVPSVKSILADEQYSTIFKDTRELARVTVGMV
HHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
DALLQGGEPEINDTKTYDNGVKVVPSYLLKPVLVDKSNWEEVLIGSGYYTKDQIQ
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MKKIASIFASLALGATLLTGVVQAQEKGLIGIAMPTKSSARWISDGNSMVEQFKAAGYET
CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCC
DLQYAEDDIPNQLAQIENMITKGVNVLVIAAIDGTTLSNALENANAADIKVIAYDRLIRD
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHCCCCCCEEEEEEHHHHHCC
SEHVDYYATFDNFQVGVQQATSLVDGLKERFPDQKPWNIELFGGSPDDNNAYFFYDGAMS
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEECCHHH
VLQPLIDSGEITVPSGQMGMDKVGTLRWDGAVAQSRMDNLLSAYYTDKEVNGVLSPYDGL
HHHHHHCCCCEECCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCC
SIGILSSLKGVGYGSGDLKMPIVTGQDAEVPSVKSILADEQYSTIFKDTRELARVTVGMV
HHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
DALLQGGEPEINDTKTYDNGVKVVPSYLLKPVLVDKSNWEEVLIGSGYYTKDQIQ
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; xylose [Periplasm]; H2O [C]

Specific reaction: ATP + xylose [Periplasm] + H2O = ADP + phosphate + xylose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8253785; 2156804; 11743193; 11743194 [H]