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The map label for this gene is yiaM [C]

Identifier: 110633145

GI number: 110633145

Start: 866745

End: 867215

Strand: Reverse

Name: yiaM [C]

Synonym: Meso_0788

Alternate gene names: 110633145

Gene position: 867215-866745 (Counterclockwise)

Preceding gene: 110633146

Following gene: 110633144

Centisome position: 19.65

GC content: 59.02

Gene sequence:

>471_bases
ATGACGCAAGTCTGCCGATTGCTGAGGGTAGCCGTCGGAGGTCTCATTGTCGCGCTCGTTTTGAGCGTGGCAATGGGCGT
CTTCTACCGATACGCCCTGCGGGAGTCGCTCTATTGGGCGACGGAAGTGCCGAACTTCATGCTGATCTGGATCGTGTTTC
TCGGCGCGGTGATCGCCTTCCATGAGAAGCAGCATATTGCCTTCACCCTCCTCCAGGAAATGCTGCCCCAGCGCGGCAAC
GCCCTGCTCGACCTGATCGCGACGCTGATCGTGATCTCGTTCCTGCTCGTCTTCGCCGTCTTCGGCGCCAAGCTCGTGCT
CGTCACAATGAACAGCCTTTCCGAGGCCCTCAAAATTCCGATGGGTTACGTCTACGCCTGCCTGCCGCTTTCGGCCACGC
TGATGACCATCAGTGCGCTTGGCAAAGCCTGGGAAGCCGTCCTTCGACTGACCGGAAAGGTATCTCCATGA

Upstream 100 bases:

>100_bases
ATCGTGAATCCTTCCGCGCCGGCGCCGAGGAAGCCTACGCCAAGTATCAGGACATCATCGGCGCCGACCTTATCAAGGCG
GTGCAAGAGGCGCACTGATC

Downstream 100 bases:

>100_bases
TCCTGACCTTATTCCTGGTCTTCTTCGCCTGCCTGCTGATCGGTGTTCCGATCGGCTTCGGCATGGGTTTCGCTTCTATG
GTCGCGATCGCCCTTCATGG

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: C4-Dicarboxylate Transport System Permease Small Protein; 30S Ribosomal; C4-Dicarboxylate Transport System Permease; TRAP Dicarboxylate Transporter; C4-Dicarboxylate Transport System; Sialic Acid TRAP Transporter Permease SiaT

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MTQVCRLLRVAVGGLIVALVLSVAMGVFYRYALRESLYWATEVPNFMLIWIVFLGAVIAFHEKQHIAFTLLQEMLPQRGN
ALLDLIATLIVISFLLVFAVFGAKLVLVTMNSLSEALKIPMGYVYACLPLSATLMTISALGKAWEAVLRLTGKVSP

Sequences:

>Translated_156_residues
MTQVCRLLRVAVGGLIVALVLSVAMGVFYRYALRESLYWATEVPNFMLIWIVFLGAVIAFHEKQHIAFTLLQEMLPQRGN
ALLDLIATLIVISFLLVFAVFGAKLVLVTMNSLSEALKIPMGYVYACLPLSATLMTISALGKAWEAVLRLTGKVSP
>Mature_155_residues
TQVCRLLRVAVGGLIVALVLSVAMGVFYRYALRESLYWATEVPNFMLIWIVFLGAVIAFHEKQHIAFTLLQEMLPQRGNA
LLDLIATLIVISFLLVFAVFGAKLVLVTMNSLSEALKIPMGYVYACLPLSATLMTISALGKAWEAVLRLTGKVSP

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17160; Mature: 17029

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQVCRLLRVAVGGLIVALVLSVAMGVFYRYALRESLYWATEVPNFMLIWIVFLGAVIAF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
HEKQHIAFTLLQEMLPQRGNALLDLIATLIVISFLLVFAVFGAKLVLVTMNSLSEALKIP
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
MGYVYACLPLSATLMTISALGKAWEAVLRLTGKVSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TQVCRLLRVAVGGLIVALVLSVAMGVFYRYALRESLYWATEVPNFMLIWIVFLGAVIAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
HEKQHIAFTLLQEMLPQRGNALLDLIATLIVISFLLVFAVFGAKLVLVTMNSLSEALKIP
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
MGYVYACLPLSATLMTISALGKAWEAVLRLTGKVSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA