| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is mutL
Identifier: 110632802
GI number: 110632802
Start: 487100
End: 488962
Strand: Reverse
Name: mutL
Synonym: Meso_0441
Alternate gene names: 110632802
Gene position: 488962-487100 (Counterclockwise)
Preceding gene: 110632803
Following gene: 110632801
Centisome position: 11.08
GC content: 65.32
Gene sequence:
>1863_bases ATGCCGATCCGAGCGCTAGCCGACATTATCATCAATCAGATTGCCGCCGGCGAGGTTATCGAGCGGCCGGCAAGCGTCGT GAAGGAGCTTGTGGAGAATGCGCTCGACGCCGGCGCGAAGCGCATCGAGGTGGCGACTGCCGGCGGCGGGCTCAACCTTA TCCGCGTGATCGACGACGGCGGCGGGATTCCGCCGGAAGAATTGCCTTTGGCTGTCGCGCGGCATTGCACCTCCAAGCTC ACCAGCGACATCCACGACATTCGCACGCTCGGCTTTCGCGGCGAAGCCCTGCCTTCCATCGGCTCGGTGGGCCGGCTCAC GCTGCGCTCGCGCACGCCGGACGCCGATGGCGGAGCGGAGATCACGGTGGATGGAGGAAAAGCCAGTGCCGTCAAGCCTG TGGCGGCCAATCGGGGCACGACTGTGGAGGTCCGCGACCTCTTCTTCGCCACTCCGGCGAGGCTCAAATTCATGAAGAGC GAGCGGGCGGAGGCAGCGGCCATCACGGAGGTGGTGAAGCGCATCGCGCTCGCCTTTCCCGCCGTTCGCTTCATGCTTTC CGGCACCGACCGCACGTCCACCGAGCTGCCCGCCGTTTCTGCCGACGGCGATGGCCTCCTGCGCCGGCTCGGCCAGATCA TCGGCAAGGATTTTGCCGAGAACGCCCTGCCGATCGATGCGGAGCGGGAGGGCGTGTTTCTTACCGGTTATGCCTCCATT CCTTCCTTCACCCGCGGCAACGCGCTTGCCCAGTTTGCCTATGTGAACGGAAGGCCGGTGCGCGACAAGCTGATCGCGGG CGCCATTCGCGGCGCCTATATGGATGCGCTGCCAAGAGATCGGCACGCCGTAACCGCTCTCTTCATCTCCCTCGATCCCG CTCTGGTGGACGTCAATGTCCATCCCGCCAAGGCGGATGTGCGCTTCCGCGATCCCGGCCTCGTGCGCGGCCTGATCGTC GGCGCAATCCGTCAGGCGCTGGAGGGGGCGGGAGTGCGCGCTGCCACCACAGGTGCGGCCGCCATGCTGCAAGCCTTTCG CGTTCCGGAAGGCCCGTCCCGGGCAAACGGGGCGAATGACTTCACTGGCCGGCCTTTCAGCGGCACAGAGCGCCCTCGAG GCGGATGGAGCATGGAGCTTTCGCCCAGCCGTCCGCTTGAAGATGCCTTTCCCCCCGCGGCAAACGGCTTTGCCGAGGCG CAGCAGGTTGTCTTCGACATAGGATCGGTCGTCAGTGCCGATGCGCGCGCCGGCACCCTTGAGGCTCTGTCGGATCTCGT GGGCCGTCCGCTCGGTGCTGCCAGGGCGCAGGTGCATGAAAACTATATCGTCGCGCAGACGGAGGATTCGCTTGTCATCG TCGACCAGCACGCGGCCCATGAGAGGCTCGTTTACGAGGCCCTGAAGGATGCAATCCACTCCAAGCCGCTCCCCTCGCAA ATGCTCCTGATGCCGGAGATCGTGGACCTGCCGGAGGAGGATGCCGAGCGGCTTTGCGCGCACGCGGAATTCCTGGCGCG GCTCGGCTTCGGTGTCGAGCGGTTCGGGCCGGGTGCCATCTGCGTGCGGGAAACGCCCTCCATGCTGGGCGAGGTGGATA TTGCCGCCCTCATCCGCGACCTCGCCGACGAAATCGCGGACAATGACACGGCCAACAGCCTCAAAAAGCGCATCGATCAC ATCGCCGCCACGATGGCCTGCCACGGCTCCATCCGGTCCGGCCGCAGGCTCAAGCCGGAAGAGATGAACGCTCTCTTGAG ACAGATGGAGGCGACGCCCGGCTCAGGAACGTGCAATCACGGCCGGCCGACCTATATCGAGCTGAAGCTTGCGGATATCG AGCGTTTGTTCGGCCGTCGTTAG
Upstream 100 bases:
>100_bases ATCCCTGGGGTTTCAAAGCCTGGCGCTTAGGATTTTCAAGAAAGGGGGTAACCTCCGCGCGGCCCTTCGCCCGGAAGGCG AATCCCGTTATAAAATCGCC
Downstream 100 bases:
>100_bases GGGTCGCGCTTGACGGATCAAGCGAATATGGCGCAAGAAGCGCGCAGGCAAAAGGCTAAGGCATGAACCGTTTCGAGGGC CCGGGCGCCCGTGAAGCACG
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 620; Mature: 619
Protein sequence:
>620_residues MPIRALADIIINQIAAGEVIERPASVVKELVENALDAGAKRIEVATAGGGLNLIRVIDDGGGIPPEELPLAVARHCTSKL TSDIHDIRTLGFRGEALPSIGSVGRLTLRSRTPDADGGAEITVDGGKASAVKPVAANRGTTVEVRDLFFATPARLKFMKS ERAEAAAITEVVKRIALAFPAVRFMLSGTDRTSTELPAVSADGDGLLRRLGQIIGKDFAENALPIDAEREGVFLTGYASI PSFTRGNALAQFAYVNGRPVRDKLIAGAIRGAYMDALPRDRHAVTALFISLDPALVDVNVHPAKADVRFRDPGLVRGLIV GAIRQALEGAGVRAATTGAAAMLQAFRVPEGPSRANGANDFTGRPFSGTERPRGGWSMELSPSRPLEDAFPPAANGFAEA QQVVFDIGSVVSADARAGTLEALSDLVGRPLGAARAQVHENYIVAQTEDSLVIVDQHAAHERLVYEALKDAIHSKPLPSQ MLLMPEIVDLPEEDAERLCAHAEFLARLGFGVERFGPGAICVRETPSMLGEVDIAALIRDLADEIADNDTANSLKKRIDH IAATMACHGSIRSGRRLKPEEMNALLRQMEATPGSGTCNHGRPTYIELKLADIERLFGRR
Sequences:
>Translated_620_residues MPIRALADIIINQIAAGEVIERPASVVKELVENALDAGAKRIEVATAGGGLNLIRVIDDGGGIPPEELPLAVARHCTSKL TSDIHDIRTLGFRGEALPSIGSVGRLTLRSRTPDADGGAEITVDGGKASAVKPVAANRGTTVEVRDLFFATPARLKFMKS ERAEAAAITEVVKRIALAFPAVRFMLSGTDRTSTELPAVSADGDGLLRRLGQIIGKDFAENALPIDAEREGVFLTGYASI PSFTRGNALAQFAYVNGRPVRDKLIAGAIRGAYMDALPRDRHAVTALFISLDPALVDVNVHPAKADVRFRDPGLVRGLIV GAIRQALEGAGVRAATTGAAAMLQAFRVPEGPSRANGANDFTGRPFSGTERPRGGWSMELSPSRPLEDAFPPAANGFAEA QQVVFDIGSVVSADARAGTLEALSDLVGRPLGAARAQVHENYIVAQTEDSLVIVDQHAAHERLVYEALKDAIHSKPLPSQ MLLMPEIVDLPEEDAERLCAHAEFLARLGFGVERFGPGAICVRETPSMLGEVDIAALIRDLADEIADNDTANSLKKRIDH IAATMACHGSIRSGRRLKPEEMNALLRQMEATPGSGTCNHGRPTYIELKLADIERLFGRR >Mature_619_residues PIRALADIIINQIAAGEVIERPASVVKELVENALDAGAKRIEVATAGGGLNLIRVIDDGGGIPPEELPLAVARHCTSKLT SDIHDIRTLGFRGEALPSIGSVGRLTLRSRTPDADGGAEITVDGGKASAVKPVAANRGTTVEVRDLFFATPARLKFMKSE RAEAAAITEVVKRIALAFPAVRFMLSGTDRTSTELPAVSADGDGLLRRLGQIIGKDFAENALPIDAEREGVFLTGYASIP SFTRGNALAQFAYVNGRPVRDKLIAGAIRGAYMDALPRDRHAVTALFISLDPALVDVNVHPAKADVRFRDPGLVRGLIVG AIRQALEGAGVRAATTGAAAMLQAFRVPEGPSRANGANDFTGRPFSGTERPRGGWSMELSPSRPLEDAFPPAANGFAEAQ QVVFDIGSVVSADARAGTLEALSDLVGRPLGAARAQVHENYIVAQTEDSLVIVDQHAAHERLVYEALKDAIHSKPLPSQM LLMPEIVDLPEEDAERLCAHAEFLARLGFGVERFGPGAICVRETPSMLGEVDIAALIRDLADEIADNDTANSLKKRIDHI AATMACHGSIRSGRRLKPEEMNALLRQMEATPGSGTCNHGRPTYIELKLADIERLFGRR
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family
Homologues:
Organism=Homo sapiens, GI4557757, Length=313, Percent_Identity=35.1437699680511, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI4505913, Length=338, Percent_Identity=26.9230769230769, Blast_Score=129, Evalue=1e-29, Organism=Homo sapiens, GI310128478, Length=338, Percent_Identity=26.9230769230769, Blast_Score=129, Evalue=1e-29, Organism=Homo sapiens, GI4505911, Length=314, Percent_Identity=29.2993630573248, Blast_Score=125, Evalue=9e-29, Organism=Homo sapiens, GI189458898, Length=314, Percent_Identity=29.2993630573248, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI189458896, Length=308, Percent_Identity=28.2467532467532, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI310128480, Length=299, Percent_Identity=24.7491638795987, Blast_Score=96, Evalue=9e-20, Organism=Homo sapiens, GI263191589, Length=239, Percent_Identity=28.0334728033473, Blast_Score=90, Evalue=6e-18, Organism=Homo sapiens, GI91992162, Length=366, Percent_Identity=25.1366120218579, Blast_Score=80, Evalue=5e-15, Organism=Homo sapiens, GI91992160, Length=366, Percent_Identity=25.1366120218579, Blast_Score=80, Evalue=6e-15, Organism=Escherichia coli, GI1790612, Length=333, Percent_Identity=48.3483483483483, Blast_Score=266, Evalue=4e-72, Organism=Caenorhabditis elegans, GI71991825, Length=330, Percent_Identity=36.0606060606061, Blast_Score=166, Evalue=5e-41, Organism=Caenorhabditis elegans, GI17562796, Length=341, Percent_Identity=26.6862170087977, Blast_Score=121, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6323819, Length=321, Percent_Identity=33.3333333333333, Blast_Score=172, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6324247, Length=337, Percent_Identity=29.9703264094956, Blast_Score=120, Evalue=5e-28, Organism=Saccharomyces cerevisiae, GI6323063, Length=347, Percent_Identity=28.5302593659942, Blast_Score=91, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6325093, Length=696, Percent_Identity=21.551724137931, Blast_Score=81, Evalue=4e-16, Organism=Drosophila melanogaster, GI17136968, Length=359, Percent_Identity=33.1476323119777, Blast_Score=186, Evalue=4e-47, Organism=Drosophila melanogaster, GI17136970, Length=352, Percent_Identity=28.4090909090909, Blast_Score=102, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MUTL_MESSB (Q11L80)
Other databases:
- EMBL: CP000390 - RefSeq: YP_673010.1 - ProteinModelPortal: Q11L80 - SMR: Q11L80 - STRING: Q11L80 - GeneID: 4179982 - GenomeReviews: CP000390_GR - KEGG: mes:Meso_0441 - NMPDR: fig|266779.1.peg.2588 - eggNOG: COG0323 - HOGENOM: HBG520262 - OMA: FLFINNR - PhylomeDB: Q11L80 - ProtClustDB: PRK00095 - BioCyc: MSP266779:MESO_0441-MONOMER - HAMAP: MF_00149 - InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 - Gene3D: G3DSA:3.30.565.10 - Gene3D: G3DSA:3.30.230.10 - PANTHER: PTHR10073 - SMART: SM00387 - SMART: SM00853 - TIGRFAMs: TIGR00585
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 66073; Mature: 65942
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIRALADIIINQIAAGEVIERPASVVKELVENALDAGAKRIEVATAGGGLNLIRVIDDG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEECC GGIPPEELPLAVARHCTSKLTSDIHDIRTLGFRGEALPSIGSVGRLTLRSRTPDADGGAE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCE ITVDGGKASAVKPVAANRGTTVEVRDLFFATPARLKFMKSERAEAAAITEVVKRIALAFP EEECCCCCCCCCCHHCCCCCEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVRFMLSGTDRTSTELPAVSADGDGLLRRLGQIIGKDFAENALPIDAEREGVFLTGYASI HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC PSFTRGNALAQFAYVNGRPVRDKLIAGAIRGAYMDALPRDRHAVTALFISLDPALVDVNV CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEEECCEEEEEEE HPAKADVRFRDPGLVRGLIVGAIRQALEGAGVRAATTGAAAMLQAFRVPEGPSRANGAND CCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCC FTGRPFSGTERPRGGWSMELSPSRPLEDAFPPAANGFAEAQQVVFDIGSVVSADARAGTL CCCCCCCCCCCCCCCCEEECCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHH EALSDLVGRPLGAARAQVHENYIVAQTEDSLVIVDQHAAHERLVYEALKDAIHSKPLPSQ HHHHHHHCCCCCHHHHHHHCCEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCHH MLLMPEIVDLPEEDAERLCAHAEFLARLGFGVERFGPGAICVRETPSMLGEVDIAALIRD HHHCHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEECCHHHHHHHHHHHHHHH LADEIADNDTANSLKKRIDHIAATMACHGSIRSGRRLKPEEMNALLRQMEATPGSGTCNH HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC GRPTYIELKLADIERLFGRR CCCCEEEEEHHHHHHHHCCC >Mature Secondary Structure PIRALADIIINQIAAGEVIERPASVVKELVENALDAGAKRIEVATAGGGLNLIRVIDDG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEECC GGIPPEELPLAVARHCTSKLTSDIHDIRTLGFRGEALPSIGSVGRLTLRSRTPDADGGAE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCE ITVDGGKASAVKPVAANRGTTVEVRDLFFATPARLKFMKSERAEAAAITEVVKRIALAFP EEECCCCCCCCCCHHCCCCCEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVRFMLSGTDRTSTELPAVSADGDGLLRRLGQIIGKDFAENALPIDAEREGVFLTGYASI HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC PSFTRGNALAQFAYVNGRPVRDKLIAGAIRGAYMDALPRDRHAVTALFISLDPALVDVNV CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEEECCEEEEEEE HPAKADVRFRDPGLVRGLIVGAIRQALEGAGVRAATTGAAAMLQAFRVPEGPSRANGAND CCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCC FTGRPFSGTERPRGGWSMELSPSRPLEDAFPPAANGFAEAQQVVFDIGSVVSADARAGTL CCCCCCCCCCCCCCCCEEECCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHH EALSDLVGRPLGAARAQVHENYIVAQTEDSLVIVDQHAAHERLVYEALKDAIHSKPLPSQ HHHHHHHCCCCCHHHHHHHCCEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCHH MLLMPEIVDLPEEDAERLCAHAEFLARLGFGVERFGPGAICVRETPSMLGEVDIAALIRD HHHCHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEECCHHHHHHHHHHHHHHH LADEIADNDTANSLKKRIDHIAATMACHGSIRSGRRLKPEEMNALLRQMEATPGSGTCNH HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC GRPTYIELKLADIERLFGRR CCCCEEEEEHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA