| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110632509
Identifier: 110632509
GI number: 110632509
Start: 181645
End: 182031
Strand: Reverse
Name: 110632509
Synonym: Meso_0147
Alternate gene names: NA
Gene position: 182031-181645 (Counterclockwise)
Preceding gene: 110632510
Following gene: 110632508
Centisome position: 4.13
GC content: 58.66
Gene sequence:
>387_bases ATGCGTATTCCAATCCTGGTCGCCGCCGCGCTGGCGGCTACGATGCCCTTCACCTACGCCGAGAATTATGTGGGCGGAGC GATAAAATCCGTGGAGAATGCCGGAGGCAAGATCCTTACAGATGCCAAGGACATGACGCTCTACATCTTCGACAAGGATA CCGCAGGGGTGACAAACTGCTACGACACTTGCGCCGAGAATTGGCCGCCCCTTATCGCTGCATCCGGCGCAGCCGCCGAG GGAGAGTTCACGCTCGTCCAGCGCAAGGACGGCAGCATGCAATGGGCTTATAAAGGCATGCCGCTCTACCTCTGGAAGAA CGACAAAAAGCCGGGTGACGTAACGGGAGACGGCGTAGGCGGGGTCTGGCACCTCGCAAAAGAGTAG
Upstream 100 bases:
>100_bases TTGCGAATTTTATCGGCAAGCGGGGATTAAATTCCCCTTCGCTACTGTTCTCTTCCTGCGGACAGTCAACCCGCATCATT CACAAAGGAAGGTTTCAAAC
Downstream 100 bases:
>100_bases GGCATGTCGCAGATCCTGGACGAGATCGAGGAATGCGTGCCAGCGCTGAGGCGCTATGCCCGAGCTCTGACGCACGATGC AGATCACGCGGATGATCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Signal Peptide Protein; Secreted Repeat Protein; Secreted Repeat-Containing Protein; Secreted Protein; Exported Protein
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MRIPILVAAALAATMPFTYAENYVGGAIKSVENAGGKILTDAKDMTLYIFDKDTAGVTNCYDTCAENWPPLIAASGAAAE GEFTLVQRKDGSMQWAYKGMPLYLWKNDKKPGDVTGDGVGGVWHLAKE
Sequences:
>Translated_128_residues MRIPILVAAALAATMPFTYAENYVGGAIKSVENAGGKILTDAKDMTLYIFDKDTAGVTNCYDTCAENWPPLIAASGAAAE GEFTLVQRKDGSMQWAYKGMPLYLWKNDKKPGDVTGDGVGGVWHLAKE >Mature_128_residues MRIPILVAAALAATMPFTYAENYVGGAIKSVENAGGKILTDAKDMTLYIFDKDTAGVTNCYDTCAENWPPLIAASGAAAE GEFTLVQRKDGSMQWAYKGMPLYLWKNDKKPGDVTGDGVGGVWHLAKE
Specific function: Unknown
COG id: COG4315
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13737; Mature: 13737
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIPILVAAALAATMPFTYAENYVGGAIKSVENAGGKILTDAKDMTLYIFDKDTAGVTNC CCCHHHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCHHH YDTCAENWPPLIAASGAAAEGEFTLVQRKDGSMQWAYKGMPLYLWKNDKKPGDVTGDGVG HHHHHCCCCCEEEECCCCCCCCEEEEEECCCCEEEEECCEEEEEEECCCCCCCCCCCCCC GVWHLAKE CEEEECCC >Mature Secondary Structure MRIPILVAAALAATMPFTYAENYVGGAIKSVENAGGKILTDAKDMTLYIFDKDTAGVTNC CCCHHHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCHHH YDTCAENWPPLIAASGAAAEGEFTLVQRKDGSMQWAYKGMPLYLWKNDKKPGDVTGDGVG HHHHHCCCCCEEEECCCCCCCCEEEEEECCCCEEEEECCEEEEEEECCCCCCCCCCCCCC GVWHLAKE CEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA