| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110632478
Identifier: 110632478
GI number: 110632478
Start: 142820
End: 143368
Strand: Direct
Name: 110632478
Synonym: Meso_0116
Alternate gene names: NA
Gene position: 142820-143368 (Clockwise)
Preceding gene: 110632477
Following gene: 110632479
Centisome position: 3.24
GC content: 60.11
Gene sequence:
>549_bases TTGATGAGTACACAAGTCAATAAGCTCGACACGGAAGCCGGTGGGCGGTTTACACGTGTTTCCGAAGTGCGCCCTGCGGC GGTAAAGCCGCAGGAGAAGGTTTCCTGGTCCATCGACGAGCCCTCCAGCAGCTATGCGGCCATGCTGGGGGAGGCTTATG ACGGCGATTCAGCCGAGGCGATGGCCGTTACGGCCGGTCCGCGGCGAACCGGAGAGGTGAGGGAACAATCGCACTTGGCC GCAGCCTTGGAAACGCCGCGTAAGGCTTCGCAAAAAGTCGCGCCGGTCGATCATGACAGAAACTCAGCGCAGTTTCTGGA GCGGTTGCATGGCCGCGAGGGAGCATATCCAGTAGCCGATGGAGAGCCGGTGTCGCAGGCGCCCGCGGCCAGGCAACTGC ATGACCGGCTCGTACTGTTCTCCAGTAAAATGGAGGTCTCCGAAATCGCCACTCATGTGGCCCTGCGGCCTTTTATGCGG CTGATGCAGATATTGTCGCAACAGAACTGGAAGCGCCCGAACCATTTTAGGCTAGGTACGGGCGCCTAG
Upstream 100 bases:
>100_bases GCAATTTTGCCTATGTGAGAGCGCGTCTTGCCATGCTGAGCGGCCATTCCGGAGCGGAAGGGCAAAGTGCAATCAGGGCC TATCTGGGAAAGATGGATAG
Downstream 100 bases:
>100_bases TAGGCTGGAAATGAGAAGTTGACCGATTTGATGTCGCAGATGAACTGCTCGACCTTAGCGCATAAATCCGAGCACCGGCT TCGGTTATCGGAAGCCATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MMSTQVNKLDTEAGGRFTRVSEVRPAAVKPQEKVSWSIDEPSSSYAAMLGEAYDGDSAEAMAVTAGPRRTGEVREQSHLA AALETPRKASQKVAPVDHDRNSAQFLERLHGREGAYPVADGEPVSQAPAARQLHDRLVLFSSKMEVSEIATHVALRPFMR LMQILSQQNWKRPNHFRLGTGA
Sequences:
>Translated_182_residues MMSTQVNKLDTEAGGRFTRVSEVRPAAVKPQEKVSWSIDEPSSSYAAMLGEAYDGDSAEAMAVTAGPRRTGEVREQSHLA AALETPRKASQKVAPVDHDRNSAQFLERLHGREGAYPVADGEPVSQAPAARQLHDRLVLFSSKMEVSEIATHVALRPFMR LMQILSQQNWKRPNHFRLGTGA >Mature_182_residues MMSTQVNKLDTEAGGRFTRVSEVRPAAVKPQEKVSWSIDEPSSSYAAMLGEAYDGDSAEAMAVTAGPRRTGEVREQSHLA AALETPRKASQKVAPVDHDRNSAQFLERLHGREGAYPVADGEPVSQAPAARQLHDRLVLFSSKMEVSEIATHVALRPFMR LMQILSQQNWKRPNHFRLGTGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20022; Mature: 20022
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSTQVNKLDTEAGGRFTRVSEVRPAAVKPQEKVSWSIDEPSSSYAAMLGEAYDGDSAEA CCCCCCCHHHHCCCCCEEECCCCCCCCCCCHHHCEECCCCCCHHHHHHHHCCCCCCCCCE MAVTAGPRRTGEVREQSHLAAALETPRKASQKVAPVDHDRNSAQFLERLHGREGAYPVAD EEEECCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC GEPVSQAPAARQLHDRLVLFSSKMEVSEIATHVALRPFMRLMQILSQQNWKRPNHFRLGT CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCC GA CC >Mature Secondary Structure MMSTQVNKLDTEAGGRFTRVSEVRPAAVKPQEKVSWSIDEPSSSYAAMLGEAYDGDSAEA CCCCCCCHHHHCCCCCEEECCCCCCCCCCCHHHCEECCCCCCHHHHHHHHCCCCCCCCCE MAVTAGPRRTGEVREQSHLAAALETPRKASQKVAPVDHDRNSAQFLERLHGREGAYPVAD EEEECCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC GEPVSQAPAARQLHDRLVLFSSKMEVSEIATHVALRPFMRLMQILSQQNWKRPNHFRLGT CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCC GA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA