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The map label for this gene is omp31 [H]

Identifier: 110632458

GI number: 110632458

Start: 125857

End: 126570

Strand: Direct

Name: omp31 [H]

Synonym: Meso_0096

Alternate gene names: 110632458

Gene position: 125857-126570 (Clockwise)

Preceding gene: 110632456

Following gene: 110632460

Centisome position: 2.85

GC content: 53.08

Gene sequence:

>714_bases
ATGAAACTGTTAGTAGCAACCGCGGCGGCCTGTGTAATCTCCAGTTCCGCCTTTGCGGCTGACATTCTCTATGACGCACC
ACCAGCTCCTCCAGCACCTCCTCCTCCGCCAGCGCCGTTTAACTGGACGGGTCCCTATGTCGGCGTGTATGGCGGAATCG
CAGCCGGCGATATCAAGCACAATCTAAACGTGCTCGGCAACGTGCCTTTCACTGGTCTTCTGACGGAACGTTCCCGGGCA
GGTGGGGCTATTGGTGGTATTCAGGTAGGCTATGACTGGCAGGTGAACAACTGGGTTCTCGGCGCAGTCGCGGACATTGC
CGCCACTAATTACGAGGTGAAAAACTCATATTATGTTCTTGGAACGCGAATCGCGAAAGATTCGTCAAAGCTGTCCTATC
TTGGTACGGTGCGCGCTCGTGCTGGTTATGCCTGGGATCGCACGCTCGTATACGGTCATGGTGGATTTGCCTATGGTAAA
ACCAAACAGACGAGCGATTTTATTGGAACCGACACATTGAAGCAGAGCCAGACCAGGACCGGATGGACGATCGGGGCGGG
GGTTGAATACGCTGTCACGGATCGCATCTCCCTCGGTTCGGAATATTCCTATGTCGATTTCGGCAAGAAGGATATTTATA
AGGACGCCAACATTTCCATAAATGAGGATGTGGCCCTCCATTCCGTCAAAGCATTTCTAAACGTGCGCTTCTGA

Upstream 100 bases:

>100_bases
ACGGTCAAAGAGTCATTACTCGTCATGCGGAGAAGCGTACTCGCATGTCCTGCCGCGACTGATCATCCGAACAGGTCATT
ACTAAGAAAGGGAAAACTTG

Downstream 100 bases:

>100_bases
TCTCCATTGGACGGAGCAGTCGGGCCGCACGTCCCACATGTGACTGCTCCGTCTTTCCTCAGCGGGCGGAGTGCGCTTGT
CGCGCCTGAAGAAGTATGGA

Product: outer membrane protein, 31 kDa

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MKLLVATAAACVISSSAFAADILYDAPPAPPAPPPPPAPFNWTGPYVGVYGGIAAGDIKHNLNVLGNVPFTGLLTERSRA
GGAIGGIQVGYDWQVNNWVLGAVADIAATNYEVKNSYYVLGTRIAKDSSKLSYLGTVRARAGYAWDRTLVYGHGGFAYGK
TKQTSDFIGTDTLKQSQTRTGWTIGAGVEYAVTDRISLGSEYSYVDFGKKDIYKDANISINEDVALHSVKAFLNVRF

Sequences:

>Translated_237_residues
MKLLVATAAACVISSSAFAADILYDAPPAPPAPPPPPAPFNWTGPYVGVYGGIAAGDIKHNLNVLGNVPFTGLLTERSRA
GGAIGGIQVGYDWQVNNWVLGAVADIAATNYEVKNSYYVLGTRIAKDSSKLSYLGTVRARAGYAWDRTLVYGHGGFAYGK
TKQTSDFIGTDTLKQSQTRTGWTIGAGVEYAVTDRISLGSEYSYVDFGKKDIYKDANISINEDVALHSVKAFLNVRF
>Mature_237_residues
MKLLVATAAACVISSSAFAADILYDAPPAPPAPPPPPAPFNWTGPYVGVYGGIAAGDIKHNLNVLGNVPFTGLLTERSRA
GGAIGGIQVGYDWQVNNWVLGAVADIAATNYEVKNSYYVLGTRIAKDSSKLSYLGTVRARAGYAWDRTLVYGHGGFAYGK
TKQTSDFIGTDTLKQSQTRTGWTIGAGVEYAVTDRISLGSEYSYVDFGKKDIYKDANISINEDVALHSVKAFLNVRF

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 25328; Mature: 25328

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLVATAAACVISSSAFAADILYDAPPAPPAPPPPPAPFNWTGPYVGVYGGIAAGDIKH
CEEEHEEHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCC
NLNVLGNVPFTGLLTERSRAGGAIGGIQVGYDWQVNNWVLGAVADIAATNYEVKNSYYVL
CCEEEECCCEEEEEECCCCCCCCCCCEEEEEEEEECCEEEEEHHHHHHCCEEECCCEEEE
GTRIAKDSSKLSYLGTVRARAGYAWDRTLVYGHGGFAYGKTKQTSDFIGTDTLKQSQTRT
EEEEECCCCCEEEEEEEHHHCCCEECCEEEEECCCEEECCCCCCCCCCCCCCHHHCCCCC
GWTIGAGVEYAVTDRISLGSEYSYVDFGKKDIYKDANISINEDVALHSVKAFLNVRF
CEEECCCCEEEEECEEECCCCCCEEECCHHHHCCCCCCEECCCHHHHEEEEEEEECC
>Mature Secondary Structure
MKLLVATAAACVISSSAFAADILYDAPPAPPAPPPPPAPFNWTGPYVGVYGGIAAGDIKH
CEEEHEEHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCC
NLNVLGNVPFTGLLTERSRAGGAIGGIQVGYDWQVNNWVLGAVADIAATNYEVKNSYYVL
CCEEEECCCEEEEEECCCCCCCCCCCEEEEEEEEECCEEEEEHHHHHHCCEEECCCEEEE
GTRIAKDSSKLSYLGTVRARAGYAWDRTLVYGHGGFAYGKTKQTSDFIGTDTLKQSQTRT
EEEEECCCCCEEEEEEEHHHCCCEECCEEEEECCCEEECCCCCCCCCCCCCCHHHCCCCC
GWTIGAGVEYAVTDRISLGSEYSYVDFGKKDIYKDANISINEDVALHSVKAFLNVRF
CEEECCCCEEEEECEEECCCCCCEEECCHHHHCCCCCCEECCCHHHHEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]