Click here to switch to the map view.

The map label for this gene is 110632449

Identifier: 110632449

GI number: 110632449

Start: 115925

End: 116521

Strand: Direct

Name: 110632449

Synonym: Meso_0087

Alternate gene names: NA

Gene position: 115925-116521 (Clockwise)

Preceding gene: 110632448

Following gene: 110632450

Centisome position: 2.63

GC content: 54.61

Gene sequence:

>597_bases
ATGAAAGTTTCGAGCCCCGGCGTAACTTCTCCTTTCCTGTTCTCCGATAGACTGCCTTTTCCAATTCCGATCTTGATGGT
GACGAAAATGCGTCGTGTTCTTTTTCTTTCCTTCGCCCTGTTTCTTTACCCTTTCGCTGCTTCGTCGGAGCCGCTTCAAT
GGTCCAGCGAAAGCCTGCCGGATCCGGTCCAGTCGATCCTCACCGGCTATGAGAAAATGTGCAGCGACATCGATGGCAAG
CTCGAATCAGGCTTCGACCAGCCGATGATCATGACAGGCGATATAGACGGGGACGGGGTTCAGGATTTCATTCTCAACCC
GCAGAACATGCAGTGCAGTGCTGGCGCCACCACCTTCTGCGGCAATGGCGGATGTTATATTTCGCTTGCGCTTTCCGGTC
AGAATTACGCCGAACCCGTCACGATCATGGGTGGTGCGCCGGCCATTTCCCAGAGCGAAGAGGGAACCATGCTGAACGTT
TGGGTCAGCAACGCCAACTGCAAAACCACGGAAGCTGCGAGTTCGTGCCTCGGCCGCTATTCGTGGGCGGATGGCAAGCT
CACAACTACTTACGAAGCTCGGCAGTTTCAGGAGTAG

Upstream 100 bases:

>100_bases
CGGAGGTAGTGCAATGGCAGGCTTCCCCTGGTTGATCGTGCCATGACATAGGTCTGTCGCGCGCTGAGCATCAGAACCCC
CGCGGCAAGGAGCAAACAGC

Downstream 100 bases:

>100_bases
TCCAGGTGCATTCCCTCCAGTTGGCGTGATTTGGCTCAACGCGGAATCACGGCTGCGGACGTGGCATTTTGCCCACGATT
CCGGTAATGGACGCCCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKVSSPGVTSPFLFSDRLPFPIPILMVTKMRRVLFLSFALFLYPFAASSEPLQWSSESLPDPVQSILTGYEKMCSDIDGK
LESGFDQPMIMTGDIDGDGVQDFILNPQNMQCSAGATTFCGNGGCYISLALSGQNYAEPVTIMGGAPAISQSEEGTMLNV
WVSNANCKTTEAASSCLGRYSWADGKLTTTYEARQFQE

Sequences:

>Translated_198_residues
MKVSSPGVTSPFLFSDRLPFPIPILMVTKMRRVLFLSFALFLYPFAASSEPLQWSSESLPDPVQSILTGYEKMCSDIDGK
LESGFDQPMIMTGDIDGDGVQDFILNPQNMQCSAGATTFCGNGGCYISLALSGQNYAEPVTIMGGAPAISQSEEGTMLNV
WVSNANCKTTEAASSCLGRYSWADGKLTTTYEARQFQE
>Mature_198_residues
MKVSSPGVTSPFLFSDRLPFPIPILMVTKMRRVLFLSFALFLYPFAASSEPLQWSSESLPDPVQSILTGYEKMCSDIDGK
LESGFDQPMIMTGDIDGDGVQDFILNPQNMQCSAGATTFCGNGGCYISLALSGQNYAEPVTIMGGAPAISQSEEGTMLNV
WVSNANCKTTEAASSCLGRYSWADGKLTTTYEARQFQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21452; Mature: 21452

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVSSPGVTSPFLFSDRLPFPIPILMVTKMRRVLFLSFALFLYPFAASSEPLQWSSESLP
CCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DPVQSILTGYEKMCSDIDGKLESGFDQPMIMTGDIDGDGVQDFILNPQNMQCSAGATTFC
HHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEECCCCCCCCHHHHCCCCCCEECCCCCEEE
GNGGCYISLALSGQNYAEPVTIMGGAPAISQSEEGTMLNVWVSNANCKTTEAASSCLGRY
CCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCC
SWADGKLTTTYEARQFQE
CCCCCCEEEEEHHHHCCC
>Mature Secondary Structure
MKVSSPGVTSPFLFSDRLPFPIPILMVTKMRRVLFLSFALFLYPFAASSEPLQWSSESLP
CCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DPVQSILTGYEKMCSDIDGKLESGFDQPMIMTGDIDGDGVQDFILNPQNMQCSAGATTFC
HHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEECCCCCCCCHHHHCCCCCCEECCCCCEEE
GNGGCYISLALSGQNYAEPVTIMGGAPAISQSEEGTMLNVWVSNANCKTTEAASSCLGRY
CCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCC
SWADGKLTTTYEARQFQE
CCCCCCEEEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA