Click here to switch to the map view.

The map label for this gene is wcaA [C]

Identifier: 110632443

GI number: 110632443

Start: 109069

End: 110886

Strand: Reverse

Name: wcaA [C]

Synonym: Meso_0081

Alternate gene names: 110632443

Gene position: 110886-109069 (Counterclockwise)

Preceding gene: 110632444

Following gene: 110632442

Centisome position: 2.51

GC content: 53.25

Gene sequence:

>1818_bases
ATGACCGCGCCCATTTACAAGGTCCACCCCACGCTCGACATAATGTTGTGGGGTGGATACTCGAAATATGCCGCTGCCGA
GCTTGAAAAACTGAAGCAAACAGGCACGAAAGAGGAGCGATACCAGGCAGCATGGGGCTTGGCACGCAAAGCTGCGGCAG
ATGGAGACCTGGATGCTGCATTGGAAAATCTTTCAATTGCGAAACAGCTTTCTCCCGCAAATGCTGAGCAACTCCAGTTT
GTCATCTATGAAATGGACATCCTCCGCCGAGCTGGGAGTTTCGAGGAGGCTAGATCTCTCGCCCTGGACCACGTAGGCAA
CGAGGACGACCCGCGACTTTGCGTCGGACTATCATCACTTTATGATGAGCCAGAAAGGCGCCTGCATTGGCTGAACAAGC
CATTGCTGGCCTCCGGGTTTGCTCCCCTAAAATTGCGAAATGCCAGCGAACCGCTAGCCATCGACAACGTAACTGCTGAT
GTTTCTCCGATTGAAGACGGCCTGAAAGTCTCAGTTATCATGCCGTCGTTTAACGCCCAAGAGACGATTGAGATGGCTGC
ACGAGGCATCCTTGAGCAGTCTTGGCGCAATCTCGAACTCATCATTGTGGACGATGCCAGTACGGACGACACATGGGCGA
TAGTTCAGGCGATTGCTGCCAATGATGAGCGCGTAATACCCATCAGGCAGCCGGTGAACGGCGGTGTCTACAAAGCCAGA
AATACAGGGCTCTCCGCATCGAGTGGTGAATACGTCACCGTAAATGATGCAGACGATTGGTCCCACCCACAGCGAATAGC
GGCGCAGGTGGGAGATATCCTTAAGGGACACACCTTCAATTCGACATACGGGGTGCGAGCCACCGCTGATCTTGTCGGAG
CCGCAAAACCCCGGAGCGGCTATTGCATCACCGAAAATACATCTTCCCTGCTGCTTCCATCAAAAATCGTTAAGGAACTC
GGCGGCTGGGATGAAGTCCGCTTTTCGTCGGATTCAGAGCTGTATTTCCGCGTGATGATGATGACCGGACACAACGAGCG
CATCCTTTGGAAGTTCGTACCTCTTGCGTTCATCCTGTCGCGGCCGATGTCCTTGACCAACGCTGGATCAGCCGGCCTAG
CGTCTCTCCACTATGGCGCGCGCCGGGAATACAAGGAAGCATCGGCCTTTTGGCGCAAACAAACCGATGATCTCGCAATC
CGACATGACCGCAGATCTTTTCCAGTGCCGAGGATCGTCGTGGAGAAAGGGGATGATCCAGTCAAGATCGACGTCCTTCT
TGTGGCGGACATGTCTCTCTCGCGAACCCTTGAAGACTTGAATGACGCATCCCGCGAGGGTCGGATTGGGCTTCTACACC
TTCCCCGTGCCAAGAATTTCGGGAAAGACTTCCATCGCGACATTCGTAGCGCCATCCATGCCGGCAATATCGAAGTGATC
GTTCCTGGACAGACGGCTGAATGCAAGATCGTTGTCATACCTGATGCGAAATGCCTTCAACAGCTTCCAGATATGCTACC
TGTCATATCCGCCGAAGAGTGCATCGCGCCGATGGACATTGATCCGAGCATTTTCGGGGCAAGGCGCCTGACCTTTCCTT
CCCCAAAAGACAAATTGGAGTTTCTGCACATTGAAGATTTTGTGGAATTCAGACACCAGATGGCATTGAAAATGCTTGCT
CCTCTGGAGGCAGAAATCAGAAAACTCGAAGCGCGCAGAAAAATCAAACTGAAGGAGCTAAAACGTGCAACCCAACGCCA
AAGCAATCGCCGCTGGGCGCGAAGCGCTCCGCAAAGCGCGTTTGTCGAATCTAGATGA

Upstream 100 bases:

>100_bases
TGAGAAGTCCACCAGTCGGTTGCGCTCTCAGCTCACCCGCATTGAAGTTTGATTTGGATGATGCCAAACAGTTGCGTTCG
CTAGAGGGATGAGATCTCAA

Downstream 100 bases:

>100_bases
AGAACTCACCGTTATAGTGTTCTACCAAGCGATGCGCGCAGGGAAATCGGACCAAGAAGACCGCCACGAGTTCATCCCAG
AAAATTATAACTTCGAGGCG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 605; Mature: 604

Protein sequence:

>605_residues
MTAPIYKVHPTLDIMLWGGYSKYAAAELEKLKQTGTKEERYQAAWGLARKAAADGDLDAALENLSIAKQLSPANAEQLQF
VIYEMDILRRAGSFEEARSLALDHVGNEDDPRLCVGLSSLYDEPERRLHWLNKPLLASGFAPLKLRNASEPLAIDNVTAD
VSPIEDGLKVSVIMPSFNAQETIEMAARGILEQSWRNLELIIVDDASTDDTWAIVQAIAANDERVIPIRQPVNGGVYKAR
NTGLSASSGEYVTVNDADDWSHPQRIAAQVGDILKGHTFNSTYGVRATADLVGAAKPRSGYCITENTSSLLLPSKIVKEL
GGWDEVRFSSDSELYFRVMMMTGHNERILWKFVPLAFILSRPMSLTNAGSAGLASLHYGARREYKEASAFWRKQTDDLAI
RHDRRSFPVPRIVVEKGDDPVKIDVLLVADMSLSRTLEDLNDASREGRIGLLHLPRAKNFGKDFHRDIRSAIHAGNIEVI
VPGQTAECKIVVIPDAKCLQQLPDMLPVISAEECIAPMDIDPSIFGARRLTFPSPKDKLEFLHIEDFVEFRHQMALKMLA
PLEAEIRKLEARRKIKLKELKRATQRQSNRRWARSAPQSAFVESR

Sequences:

>Translated_605_residues
MTAPIYKVHPTLDIMLWGGYSKYAAAELEKLKQTGTKEERYQAAWGLARKAAADGDLDAALENLSIAKQLSPANAEQLQF
VIYEMDILRRAGSFEEARSLALDHVGNEDDPRLCVGLSSLYDEPERRLHWLNKPLLASGFAPLKLRNASEPLAIDNVTAD
VSPIEDGLKVSVIMPSFNAQETIEMAARGILEQSWRNLELIIVDDASTDDTWAIVQAIAANDERVIPIRQPVNGGVYKAR
NTGLSASSGEYVTVNDADDWSHPQRIAAQVGDILKGHTFNSTYGVRATADLVGAAKPRSGYCITENTSSLLLPSKIVKEL
GGWDEVRFSSDSELYFRVMMMTGHNERILWKFVPLAFILSRPMSLTNAGSAGLASLHYGARREYKEASAFWRKQTDDLAI
RHDRRSFPVPRIVVEKGDDPVKIDVLLVADMSLSRTLEDLNDASREGRIGLLHLPRAKNFGKDFHRDIRSAIHAGNIEVI
VPGQTAECKIVVIPDAKCLQQLPDMLPVISAEECIAPMDIDPSIFGARRLTFPSPKDKLEFLHIEDFVEFRHQMALKMLA
PLEAEIRKLEARRKIKLKELKRATQRQSNRRWARSAPQSAFVESR
>Mature_604_residues
TAPIYKVHPTLDIMLWGGYSKYAAAELEKLKQTGTKEERYQAAWGLARKAAADGDLDAALENLSIAKQLSPANAEQLQFV
IYEMDILRRAGSFEEARSLALDHVGNEDDPRLCVGLSSLYDEPERRLHWLNKPLLASGFAPLKLRNASEPLAIDNVTADV
SPIEDGLKVSVIMPSFNAQETIEMAARGILEQSWRNLELIIVDDASTDDTWAIVQAIAANDERVIPIRQPVNGGVYKARN
TGLSASSGEYVTVNDADDWSHPQRIAAQVGDILKGHTFNSTYGVRATADLVGAAKPRSGYCITENTSSLLLPSKIVKELG
GWDEVRFSSDSELYFRVMMMTGHNERILWKFVPLAFILSRPMSLTNAGSAGLASLHYGARREYKEASAFWRKQTDDLAIR
HDRRSFPVPRIVVEKGDDPVKIDVLLVADMSLSRTLEDLNDASREGRIGLLHLPRAKNFGKDFHRDIRSAIHAGNIEVIV
PGQTAECKIVVIPDAKCLQQLPDMLPVISAEECIAPMDIDPSIFGARRLTFPSPKDKLEFLHIEDFVEFRHQMALKMLAP
LEAEIRKLEARRKIKLKELKRATQRQSNRRWARSAPQSAFVESR

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788372, Length=102, Percent_Identity=36.2745098039216, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1790044, Length=177, Percent_Identity=28.8135593220339, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 67530; Mature: 67399

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPIYKVHPTLDIMLWGGYSKYAAAELEKLKQTGTKEERYQAAWGLARKAAADGDLDAA
CCCCCEEECCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHH
LENLSIAKQLSPANAEQLQFVIYEMDILRRAGSFEEARSLALDHVGNEDDPRLCVGLSSL
HHHHHHHHHCCCCCHHHHEEHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEECHHH
YDEPERRLHWLNKPLLASGFAPLKLRNASEPLAIDNVTADVSPIEDGLKVSVIMPSFNAQ
HCCHHHHHHHCCCCHHHCCCCCEEECCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCHH
ETIEMAARGILEQSWRNLELIIVDDASTDDTWAIVQAIAANDERVIPIRQPVNGGVYKAR
HHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCCEEEEC
NTGLSASSGEYVTVNDADDWSHPQRIAAQVGDILKGHTFNSTYGVRATADLVGAAKPRSG
CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHCCCCCCCC
YCITENTSSLLLPSKIVKELGGWDEVRFSSDSELYFRVMMMTGHNERILWKFVPLAFILS
EEEECCCCCEECCHHHHHHHCCCCCEEECCCCCEEEEEEEEECCCCEEEHHHHHHHHHHH
RPMSLTNAGSAGLASLHYGARREYKEASAFWRKQTDDLAIRHDRRSFPVPRIVVEKGDDP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEECCCCC
VKIDVLLVADMSLSRTLEDLNDASREGRIGLLHLPRAKNFGKDFHRDIRSAIHAGNIEVI
EEEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEE
VPGQTAECKIVVIPDAKCLQQLPDMLPVISAEECIAPMDIDPSIFGARRLTFPSPKDKLE
ECCCCCCEEEEEECCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCEECCCCCCHHHEE
FLHIEDFVEFRHQMALKMLAPLEAEIRKLEARRKIKLKELKRATQRQSNRRWARSAPQSA
EEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHCCCCCC
FVESR
CCCCC
>Mature Secondary Structure 
TAPIYKVHPTLDIMLWGGYSKYAAAELEKLKQTGTKEERYQAAWGLARKAAADGDLDAA
CCCCEEECCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHH
LENLSIAKQLSPANAEQLQFVIYEMDILRRAGSFEEARSLALDHVGNEDDPRLCVGLSSL
HHHHHHHHHCCCCCHHHHEEHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEECHHH
YDEPERRLHWLNKPLLASGFAPLKLRNASEPLAIDNVTADVSPIEDGLKVSVIMPSFNAQ
HCCHHHHHHHCCCCHHHCCCCCEEECCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCHH
ETIEMAARGILEQSWRNLELIIVDDASTDDTWAIVQAIAANDERVIPIRQPVNGGVYKAR
HHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCCEEEEC
NTGLSASSGEYVTVNDADDWSHPQRIAAQVGDILKGHTFNSTYGVRATADLVGAAKPRSG
CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHCCCCCCCC
YCITENTSSLLLPSKIVKELGGWDEVRFSSDSELYFRVMMMTGHNERILWKFVPLAFILS
EEEECCCCCEECCHHHHHHHCCCCCEEECCCCCEEEEEEEEECCCCEEEHHHHHHHHHHH
RPMSLTNAGSAGLASLHYGARREYKEASAFWRKQTDDLAIRHDRRSFPVPRIVVEKGDDP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEECCCCC
VKIDVLLVADMSLSRTLEDLNDASREGRIGLLHLPRAKNFGKDFHRDIRSAIHAGNIEVI
EEEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEE
VPGQTAECKIVVIPDAKCLQQLPDMLPVISAEECIAPMDIDPSIFGARRLTFPSPKDKLE
ECCCCCCEEEEEECCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCEECCCCCCHHHEE
FLHIEDFVEFRHQMALKMLAPLEAEIRKLEARRKIKLKELKRATQRQSNRRWARSAPQSA
EEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHCCCCCC
FVESR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]