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The map label for this gene is abgR [C]

Identifier: 110632442

GI number: 110632442

Start: 107042

End: 107953

Strand: Reverse

Name: abgR [C]

Synonym: Meso_0080

Alternate gene names: 110632442

Gene position: 107953-107042 (Counterclockwise)

Preceding gene: 110632443

Following gene: 110632434

Centisome position: 2.45

GC content: 60.42

Gene sequence:

>912_bases
TTGAACTTCAAGCAGCTGGAAGCATTCTATTGGCTGGCTAAGCTGGGCAGTTACCAAAAGGTGGCCAAGCAGATAAACCT
CACTCAGCCAGCTGTATCGATTCGGGTCGGCAGCCTTGAGTCCGAACTCAGCGCGCCTCTGCTGCAGCGCGACCAGCCAG
GCATCGTGCTTACGGAAAGAGGCCATGAGGTCGCCGAATTTGCGAGCGAGTTCATGCAGCTCTACGAGCGAATGCAGAAG
TCTCTTGTGAGGCGCGAGCGCGGCGCCTTCGTCATCGGCATTATCGAGCCGATCCTCTATAGCTGGGGGCAAGAATTCGC
CCGGCAGGTGAGAAAGGCTTATCCCAACGTGGAGTTTCGGGTGACCGGGAATGCGGCGATGCGCAATCTGGTCGCCGAGC
AGGCTGTTGACCTTGTATTCGCCACCGCAACGGTCAGCAGCGATCCTGTACCGCAGAGTTTTGCCATGCGCGCGGTCATG
GGATGGGTAGCCAGTACGAAGCTCGAAATCGATGACAGCGAGCCGCTCGACGCCCAGGCGCTAGCTCGCCTGCCGCTGAT
TTTTTATCCGCGTGATGCCTCGCAGGCCGCGCCTCGACTCGAGGCGGTGGCCGAAGTCAGAGCGCTGGATCATCTTGAGG
ATACGGCTTCGGCCCTGTCGACCGCCGCGCAGATGGTCTATCGTGGTTTTGGGGTAGCGCCCCTCGTTCTCACGCCATTC
ACCAGGGCCATTGCCGAGGGCGACGTGCGGCCGCTGAATACGTCCGTTCCGCTGCCGCTGATGGAAATACGCTGCTACTA
CATGAACGCGCCGCGTCGCAGGATGGCACGCGACATCTATGCCATTGCCGAGGAAGTGGCGCAGGACTGGTGCGAGAAGC
ACCCGACCTACGCCACATTCCTGCCAGCCTAG

Upstream 100 bases:

>100_bases
ACATTCTGGGGGTGCCGGCGAAAGTTGCGCGACCCGGTTTGCCGTCGAGCGCACACTTGTCGACAGCAAGGGCCGCGGAC
TGAGATCTGGGAGGACCGTA

Downstream 100 bases:

>100_bases
GGAGGCTTTGGCTCAGGCGATCGCGCGCCGGTGACGAGCCACCGGCAGATTCTGACGCACGCGATTTTGATAGGACGGGT
CGATGGCCGCCGAGGCCCAG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LysR Family; Transcriptional Regulator; LysR Family Regulatory Helix-Turn-Helix Protein; Transcriptional Regulator LysR Family Protein; Transcriptional Regulator Lysr Family; Transcriptional Regulatory Protein LysR Family; Transcription Regulator Protein; LysR Family Transcription Regulator Protein; Transcriptional Regulator Protein; LysR Family Regulatory Protein; Fhu Operon Transcription Regulator; Regulatory Protein LysR

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MNFKQLEAFYWLAKLGSYQKVAKQINLTQPAVSIRVGSLESELSAPLLQRDQPGIVLTERGHEVAEFASEFMQLYERMQK
SLVRRERGAFVIGIIEPILYSWGQEFARQVRKAYPNVEFRVTGNAAMRNLVAEQAVDLVFATATVSSDPVPQSFAMRAVM
GWVASTKLEIDDSEPLDAQALARLPLIFYPRDASQAAPRLEAVAEVRALDHLEDTASALSTAAQMVYRGFGVAPLVLTPF
TRAIAEGDVRPLNTSVPLPLMEIRCYYMNAPRRRMARDIYAIAEEVAQDWCEKHPTYATFLPA

Sequences:

>Translated_303_residues
MNFKQLEAFYWLAKLGSYQKVAKQINLTQPAVSIRVGSLESELSAPLLQRDQPGIVLTERGHEVAEFASEFMQLYERMQK
SLVRRERGAFVIGIIEPILYSWGQEFARQVRKAYPNVEFRVTGNAAMRNLVAEQAVDLVFATATVSSDPVPQSFAMRAVM
GWVASTKLEIDDSEPLDAQALARLPLIFYPRDASQAAPRLEAVAEVRALDHLEDTASALSTAAQMVYRGFGVAPLVLTPF
TRAIAEGDVRPLNTSVPLPLMEIRCYYMNAPRRRMARDIYAIAEEVAQDWCEKHPTYATFLPA
>Mature_303_residues
MNFKQLEAFYWLAKLGSYQKVAKQINLTQPAVSIRVGSLESELSAPLLQRDQPGIVLTERGHEVAEFASEFMQLYERMQK
SLVRRERGAFVIGIIEPILYSWGQEFARQVRKAYPNVEFRVTGNAAMRNLVAEQAVDLVFATATVSSDPVPQSFAMRAVM
GWVASTKLEIDDSEPLDAQALARLPLIFYPRDASQAAPRLEAVAEVRALDHLEDTASALSTAAQMVYRGFGVAPLVLTPF
TRAIAEGDVRPLNTSVPLPLMEIRCYYMNAPRRRMARDIYAIAEEVAQDWCEKHPTYATFLPA

Specific function: Could Be The Regulator Of The Abg Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33915; Mature: 33915

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFKQLEAFYWLAKLGSYQKVAKQINLTQPAVSIRVGSLESELSAPLLQRDQPGIVLTER
CCHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHEEEECCHHHHHCCHHHCCCCCCEEEECC
GHEVAEFASEFMQLYERMQKSLVRRERGAFVIGIIEPILYSWGQEFARQVRKAYPNVEFR
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEE
VTGNAAMRNLVAEQAVDLVFATATVSSDPVPQSFAMRAVMGWVASTKLEIDDSEPLDAQA
EECHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHCEEECCCCCCCCHHH
LARLPLIFYPRDASQAAPRLEAVAEVRALDHLEDTASALSTAAQMVYRGFGVAPLVLTPF
HHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
TRAIAEGDVRPLNTSVPLPLMEIRCYYMNAPRRRMARDIYAIAEEVAQDWCEKHPTYATF
HHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
LPA
CCC
>Mature Secondary Structure
MNFKQLEAFYWLAKLGSYQKVAKQINLTQPAVSIRVGSLESELSAPLLQRDQPGIVLTER
CCHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHEEEECCHHHHHCCHHHCCCCCCEEEECC
GHEVAEFASEFMQLYERMQKSLVRRERGAFVIGIIEPILYSWGQEFARQVRKAYPNVEFR
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEE
VTGNAAMRNLVAEQAVDLVFATATVSSDPVPQSFAMRAVMGWVASTKLEIDDSEPLDAQA
EECHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHCEEECCCCCCCCHHH
LARLPLIFYPRDASQAAPRLEAVAEVRALDHLEDTASALSTAAQMVYRGFGVAPLVLTPF
HHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
TRAIAEGDVRPLNTSVPLPLMEIRCYYMNAPRRRMARDIYAIAEEVAQDWCEKHPTYATF
HHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
LPA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA