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The map label for this gene is ydaM [H]

Identifier: 110632376

GI number: 110632376

Start: 13414

End: 15384

Strand: Reverse

Name: ydaM [H]

Synonym: Meso_0014

Alternate gene names: 110632376

Gene position: 15384-13414 (Counterclockwise)

Preceding gene: 110632378

Following gene: 110632374

Centisome position: 0.35

GC content: 59.41

Gene sequence:

>1971_bases
ATGTCGGGGCGGGGCGACTTTCCATGCCGTAACGAACCATTGGATGTGTCTCCATCTGGCCTTGCCAACTGGCAGCCAAT
TCTGGAACGGCTGGGTGTTGCCTATCGTGAGATGCAGGATATCGAACGGAGGGCGAAGCTTGCGGGAGTGCCTTATCAGA
TCGAGCTTCAGTGTTCGGGGGCAGTCGGAGAACGCGCGCTCTTTCGCGCATTGGCGGCACATCTAGACCTTCCTTTCGAT
GACGAAATTGCCCCTGAGACCATCTTCCTGCCGGAAGAAAAAGGCCTGGAAGCGCTGCGCCTGCCCTATGGGATAGGTCC
TGTCATCGCCCTGGAAGATGCTGATCGAACAATTTACCTTGTCGCGCCGGAGCGCTTGGATATCGCTGCCATGCAGCGCT
TCCTCCGCAAGCATCGTGAGATCGCGGACCGAATAAGGATTGTGGCTCCATCGGTGCTGCGCCGCGCCTTGAGAAATCGT
TCCAGCGAACGCTTGTCGCGCATGGCGATTAACGGCCTGTTCGAAGCAAAGCCCGAGTTTTCAGCGCGTCACGTCCTTAA
TGGATGGCAGGGCGTCGCGGTTGGCAGCATCGGCGCACTTATCATCGTTGCTTTCGCACTGGCCCCATTCTCCGCACTCG
TCATTTTACATCTTCTGCTTTCAGTTCTCTTTCTTGCCTGCGTGCTGCTGCGCGTCGCGGTCAGCCAGGAGGCGCGCGAG
CCTTCTCCACCCGCCGTCCTGACGACTATGCGGCCTGCCGAGATGCCGGTCTATACAGTGCTGGTGGCGCTCTACCGGGA
GGCCGACGTAGTACCGGAACTGCTGGTGTCTCTGGGACGGATCGTTTGGCCGCGCAGCAAGCTGGAGATCAAGCTTGTCT
GTGAAAGCGACGACACGGAGACCCTCGCCGCCATCCGAGCACAAGAGCTGCATTCCTATATCGAAGTGATCGAGGTGCCC
CCTCACGGCCCGCGCACCAAGCCTAAGGCGCTTTCCTATGCCTTGCCCCTGGTCACGGGAGAATTCGTCGTATTGTTCGA
CGCTGAAGACAGGCCACATCCCATGCAGCTTGTCGAAGCCTGGGAGCGCTTCCGCAGCAATGAATCAGGCGACCTCGCAT
GTCTGCAGGCACCCTTGATGATCACGAACAGGGGCGAGAGCTGGATCGCCTCGATGTTCGCCTTCGAATATGCCGCACTT
TTTCGAGGCATTCTGCCGTGGCTGGCCAAGCGCGATCTCGTTCTGCCTCTTGGAGGCACCTCGAACCATTTTCGCCGCGC
TTTGCTTGAACGTGTCGGCGGCTGGGACCCATGCAATGTGACCGAGGATGCCGATCTCGGCCTCAGGCTTGCCCGGATGG
GATACAAAACGGGCACGATCAGCTCGCCCACCTACGAGGATGCCCCAACGACCGCGTGCATCTGGCTGCCGCAGCGGACC
CGCTGGTTCAAAGGCTGGATGCAGACCTGGCTGGTGCATATGCGTGACGTGCCGCGCCTTTATCGCGAACTCGGAAGAAC
ATCCTTCCTGGTCACGCAAATCCTCACGATGGGGATGTGGGTCTCGGCCCTCGCATATGCGGCTTTTCCCATAAGTGCCG
CTGTCCTGCTCGTCATAATGCTCGCCCAGGATAATCCCGTAAACCATTATACCGCGTTGCTTGCCTTGGATGCAGTCAAC
GTGATTTTCGGCCACGGTGCATTCCTGGCGCTCGGCTGGCGAACGCTCCCAAAGACGGAACAGCACGGCCTGTGGCGGCA
CATGATGTGGATTCCAGTATACTGGGCGTTGCTCTCAGCGGCCGCATGGCGGGCTCTCTGGCAGCTTTATCGCTGCCCCC
ATGTCTGGGAAAAGACGCCGCACCGGCCCAGCCTATGGAAGCTCAGGGACATTCAGCGCAGGAAGCTCGCTCCGAACCCG
ACAAGCCTTGGATCTTCTTCACCAATCGCGTCTTCGTCGCGGCCCGTATAG

Upstream 100 bases:

>100_bases
CTGCCGATGATCTGGCGGAGCGTCGAAAGCATCTGAAATCAGTGGAGCTAAGTGCCTCATGTATATGGGTGGCGCGAGTG
GTGTTTTGCGTGCTGAAAAG

Downstream 100 bases:

>100_bases
GGGAGTGAAAGCAGGATGCGGCGAATGACAGCGAGTCGCGCACGCCTCTTGTCGTTGGCAAGTACAATCATCCAGGGAGC
GTGCTGCGTATGTGTTCGCT

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 656; Mature: 655

Protein sequence:

>656_residues
MSGRGDFPCRNEPLDVSPSGLANWQPILERLGVAYREMQDIERRAKLAGVPYQIELQCSGAVGERALFRALAAHLDLPFD
DEIAPETIFLPEEKGLEALRLPYGIGPVIALEDADRTIYLVAPERLDIAAMQRFLRKHREIADRIRIVAPSVLRRALRNR
SSERLSRMAINGLFEAKPEFSARHVLNGWQGVAVGSIGALIIVAFALAPFSALVILHLLLSVLFLACVLLRVAVSQEARE
PSPPAVLTTMRPAEMPVYTVLVALYREADVVPELLVSLGRIVWPRSKLEIKLVCESDDTETLAAIRAQELHSYIEVIEVP
PHGPRTKPKALSYALPLVTGEFVVLFDAEDRPHPMQLVEAWERFRSNESGDLACLQAPLMITNRGESWIASMFAFEYAAL
FRGILPWLAKRDLVLPLGGTSNHFRRALLERVGGWDPCNVTEDADLGLRLARMGYKTGTISSPTYEDAPTTACIWLPQRT
RWFKGWMQTWLVHMRDVPRLYRELGRTSFLVTQILTMGMWVSALAYAAFPISAAVLLVIMLAQDNPVNHYTALLALDAVN
VIFGHGAFLALGWRTLPKTEQHGLWRHMMWIPVYWALLSAAAWRALWQLYRCPHVWEKTPHRPSLWKLRDIQRRKLAPNP
TSLGSSSPIASSSRPV

Sequences:

>Translated_656_residues
MSGRGDFPCRNEPLDVSPSGLANWQPILERLGVAYREMQDIERRAKLAGVPYQIELQCSGAVGERALFRALAAHLDLPFD
DEIAPETIFLPEEKGLEALRLPYGIGPVIALEDADRTIYLVAPERLDIAAMQRFLRKHREIADRIRIVAPSVLRRALRNR
SSERLSRMAINGLFEAKPEFSARHVLNGWQGVAVGSIGALIIVAFALAPFSALVILHLLLSVLFLACVLLRVAVSQEARE
PSPPAVLTTMRPAEMPVYTVLVALYREADVVPELLVSLGRIVWPRSKLEIKLVCESDDTETLAAIRAQELHSYIEVIEVP
PHGPRTKPKALSYALPLVTGEFVVLFDAEDRPHPMQLVEAWERFRSNESGDLACLQAPLMITNRGESWIASMFAFEYAAL
FRGILPWLAKRDLVLPLGGTSNHFRRALLERVGGWDPCNVTEDADLGLRLARMGYKTGTISSPTYEDAPTTACIWLPQRT
RWFKGWMQTWLVHMRDVPRLYRELGRTSFLVTQILTMGMWVSALAYAAFPISAAVLLVIMLAQDNPVNHYTALLALDAVN
VIFGHGAFLALGWRTLPKTEQHGLWRHMMWIPVYWALLSAAAWRALWQLYRCPHVWEKTPHRPSLWKLRDIQRRKLAPNP
TSLGSSSPIASSSRPV
>Mature_655_residues
SGRGDFPCRNEPLDVSPSGLANWQPILERLGVAYREMQDIERRAKLAGVPYQIELQCSGAVGERALFRALAAHLDLPFDD
EIAPETIFLPEEKGLEALRLPYGIGPVIALEDADRTIYLVAPERLDIAAMQRFLRKHREIADRIRIVAPSVLRRALRNRS
SERLSRMAINGLFEAKPEFSARHVLNGWQGVAVGSIGALIIVAFALAPFSALVILHLLLSVLFLACVLLRVAVSQEAREP
SPPAVLTTMRPAEMPVYTVLVALYREADVVPELLVSLGRIVWPRSKLEIKLVCESDDTETLAAIRAQELHSYIEVIEVPP
HGPRTKPKALSYALPLVTGEFVVLFDAEDRPHPMQLVEAWERFRSNESGDLACLQAPLMITNRGESWIASMFAFEYAALF
RGILPWLAKRDLVLPLGGTSNHFRRALLERVGGWDPCNVTEDADLGLRLARMGYKTGTISSPTYEDAPTTACIWLPQRTR
WFKGWMQTWLVHMRDVPRLYRELGRTSFLVTQILTMGMWVSALAYAAFPISAAVLLVIMLAQDNPVNHYTALLALDAVNV
IFGHGAFLALGWRTLPKTEQHGLWRHMMWIPVYWALLSAAAWRALWQLYRCPHVWEKTPHRPSLWKLRDIQRRKLAPNPT
SLGSSSPIASSSRPV

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 73673; Mature: 73542

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGRGDFPCRNEPLDVSPSGLANWQPILERLGVAYREMQDIERRAKLAGVPYQIELQCSG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
AVGERALFRALAAHLDLPFDDEIAPETIFLPEEKGLEALRLPYGIGPVIALEDADRTIYL
CCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCEEEEECCCCEEEE
VAPERLDIAAMQRFLRKHREIADRIRIVAPSVLRRALRNRSSERLSRMAINGLFEAKPEF
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
SARHVLNGWQGVAVGSIGALIIVAFALAPFSALVILHLLLSVLFLACVLLRVAVSQEARE
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PSPPAVLTTMRPAEMPVYTVLVALYREADVVPELLVSLGRIVWPRSKLEIKLVCESDDTE
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHH
TLAAIRAQELHSYIEVIEVPPHGPRTKPKALSYALPLVTGEFVVLFDAEDRPHPMQLVEA
HHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHEECCCEEEEECCCCCCCHHHHHHH
WERFRSNESGDLACLQAPLMITNRGESWIASMFAFEYAALFRGILPWLAKRDLVLPLGGT
HHHHHCCCCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
SNHFRRALLERVGGWDPCNVTEDADLGLRLARMGYKTGTISSPTYEDAPTTACIWLPQRT
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCHH
RWFKGWMQTWLVHMRDVPRLYRELGRTSFLVTQILTMGMWVSALAYAAFPISAAVLLVIM
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAQDNPVNHYTALLALDAVNVIFGHGAFLALGWRTLPKTEQHGLWRHMMWIPVYWALLSA
HHCCCCCHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AAWRALWQLYRCPHVWEKTPHRPSLWKLRDIQRRKLAPNPTSLGSSSPIASSSRPV
HHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SGRGDFPCRNEPLDVSPSGLANWQPILERLGVAYREMQDIERRAKLAGVPYQIELQCSG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
AVGERALFRALAAHLDLPFDDEIAPETIFLPEEKGLEALRLPYGIGPVIALEDADRTIYL
CCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCEEEEECCCCEEEE
VAPERLDIAAMQRFLRKHREIADRIRIVAPSVLRRALRNRSSERLSRMAINGLFEAKPEF
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
SARHVLNGWQGVAVGSIGALIIVAFALAPFSALVILHLLLSVLFLACVLLRVAVSQEARE
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PSPPAVLTTMRPAEMPVYTVLVALYREADVVPELLVSLGRIVWPRSKLEIKLVCESDDTE
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHH
TLAAIRAQELHSYIEVIEVPPHGPRTKPKALSYALPLVTGEFVVLFDAEDRPHPMQLVEA
HHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHEECCCEEEEECCCCCCCHHHHHHH
WERFRSNESGDLACLQAPLMITNRGESWIASMFAFEYAALFRGILPWLAKRDLVLPLGGT
HHHHHCCCCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
SNHFRRALLERVGGWDPCNVTEDADLGLRLARMGYKTGTISSPTYEDAPTTACIWLPQRT
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCHH
RWFKGWMQTWLVHMRDVPRLYRELGRTSFLVTQILTMGMWVSALAYAAFPISAAVLLVIM
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAQDNPVNHYTALLALDAVNVIFGHGAFLALGWRTLPKTEQHGLWRHMMWIPVYWALLSA
HHCCCCCHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AAWRALWQLYRCPHVWEKTPHRPSLWKLRDIQRRKLAPNPTSLGSSSPIASSSRPV
HHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]