| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is ilvE [H]
Identifier: 109948185
GI number: 109948185
Start: 1489016
End: 1490038
Strand: Reverse
Name: ilvE [H]
Synonym: Hac_1717
Alternate gene names: 109948185
Gene position: 1490038-1489016 (Counterclockwise)
Preceding gene: 109948186
Following gene: 109948183
Centisome position: 95.89
GC content: 43.4
Gene sequence:
>1023_bases ATGGCAAATTTAGAAAATTTGGACTGGAAAAATCTGGGCTTTAGCTACATTAAAACGGATTTTCGCTTCATCGCTACTTA TAAAAACGGCTCTTGGTCACAGGGCGAGTTAGTCAGCGAAAATGTGTTACAGATTAGTGAAGGCTCTCCGGTCTTGCATT ATGGGCAGGCTTGTTTTGAAGGCTTGAAAGCGTATCGCTCTCAAGATGGAAAAGCCCTACTCTTTCGCCCTTTAGAAAAC GCCAAACGCTTGCAAACTTCATGCGAAAGATTGCTCATGCCAAAAGTGAGCGAAGAGTTGTTTTTAAGGGCATGCACTGA AGCGATCAAAGCAAACATGAAATGGCTCGCTCCTTACAAAAGCGGGGCGAGTTTGTATTTGCGCCCTTTTGTCATAGGCG TAGGGGATAATTTGGGGGTAAAGCCGGCCAATGAATACCTTTTTATCGTATTTTGTGTGCCTGTGGGGGCGTATTTTAAG GGGGGTATAGAAAAAGGGGGGGCGAGATTTATCACCACGACTTTTGATAGAGCCGCGCCTAAAGGCACAGGGGGGGTGAA AGTGGGGGGGAATTATGCTGCAAGCTTATTGGCCCATAAAATGGCCCTAGAGCAAGGCTATGATGATTGCATTTATTTAG ACCCTACCACGCACACTAAAATTGAAGAAGTGGGGGCGGCGAATTTTTTTGGCATCACGCATGATAATACTTTTATCACT CCGCATTCGCCGAGCGTTCTACCAAGCATTACCAGAAAAAGCTTGATGTTTTTGGCTCAAGAATATTTGGGTTTGAAAGT GGAAGAAAAAGAAATTTTGATTGATAAATTAGATGTGTTTAAAGAAGCTGGAGCGTGCGGGACAGCTGCGATCATCACGC CTATTAAAGAAATTGTGCACCACAACAAGTCTTATTTTTTTGAAACGCCAGGTCATGTTACTAAGCGACTCTATGATTTG CTTTTATCCATCCAACAAGGCGAACAAAAAGCCCCTAAAGATTGGGTGCTTGAAGTTAATTAA
Upstream 100 bases:
>100_bases CCCCATTTTAAATTAAATGGAGTTACTTTGAGCGTTAATATTTGAGGGATTTTTAACCCCTTTTAGATACAATCGCATCT AAAACTGTTAAAGGTGCAAA
Downstream 100 bases:
>100_bases ACATTTTGTTTAAGAACGCTCCAAATAAGTCTCTTTGAGGCTAGCCTTAGCCCTTTGCCAATTGGGTAAATACAAACTCA ACAAATCTCTAAGATATTCG
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT [H]
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MANLENLDWKNLGFSYIKTDFRFIATYKNGSWSQGELVSENVLQISEGSPVLHYGQACFEGLKAYRSQDGKALLFRPLEN AKRLQTSCERLLMPKVSEELFLRACTEAIKANMKWLAPYKSGASLYLRPFVIGVGDNLGVKPANEYLFIVFCVPVGAYFK GGIEKGGARFITTTFDRAAPKGTGGVKVGGNYAASLLAHKMALEQGYDDCIYLDPTTHTKIEEVGAANFFGITHDNTFIT PHSPSVLPSITRKSLMFLAQEYLGLKVEEKEILIDKLDVFKEAGACGTAAIITPIKEIVHHNKSYFFETPGHVTKRLYDL LLSIQQGEQKAPKDWVLEVN
Sequences:
>Translated_340_residues MANLENLDWKNLGFSYIKTDFRFIATYKNGSWSQGELVSENVLQISEGSPVLHYGQACFEGLKAYRSQDGKALLFRPLEN AKRLQTSCERLLMPKVSEELFLRACTEAIKANMKWLAPYKSGASLYLRPFVIGVGDNLGVKPANEYLFIVFCVPVGAYFK GGIEKGGARFITTTFDRAAPKGTGGVKVGGNYAASLLAHKMALEQGYDDCIYLDPTTHTKIEEVGAANFFGITHDNTFIT PHSPSVLPSITRKSLMFLAQEYLGLKVEEKEILIDKLDVFKEAGACGTAAIITPIKEIVHHNKSYFFETPGHVTKRLYDL LLSIQQGEQKAPKDWVLEVN >Mature_339_residues ANLENLDWKNLGFSYIKTDFRFIATYKNGSWSQGELVSENVLQISEGSPVLHYGQACFEGLKAYRSQDGKALLFRPLENA KRLQTSCERLLMPKVSEELFLRACTEAIKANMKWLAPYKSGASLYLRPFVIGVGDNLGVKPANEYLFIVFCVPVGAYFKG GIEKGGARFITTTFDRAAPKGTGGVKVGGNYAASLLAHKMALEQGYDDCIYLDPTTHTKIEEVGAANFFGITHDNTFITP HSPSVLPSITRKSLMFLAQEYLGLKVEEKEILIDKLDVFKEAGACGTAAIITPIKEIVHHNKSYFFETPGHVTKRLYDLL LSIQQGEQKAPKDWVLEVN
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI296010904, Length=348, Percent_Identity=31.0344827586207, Blast_Score=160, Evalue=1e-39, Organism=Homo sapiens, GI296010906, Length=348, Percent_Identity=31.0344827586207, Blast_Score=160, Evalue=1e-39, Organism=Homo sapiens, GI38176287, Length=348, Percent_Identity=31.0344827586207, Blast_Score=160, Evalue=1e-39, Organism=Homo sapiens, GI50658084, Length=310, Percent_Identity=30.9677419354839, Blast_Score=152, Evalue=3e-37, Organism=Homo sapiens, GI258614015, Length=263, Percent_Identity=32.319391634981, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI296010902, Length=348, Percent_Identity=26.4367816091954, Blast_Score=115, Evalue=4e-26, Organism=Homo sapiens, GI296010900, Length=254, Percent_Identity=30.3149606299213, Blast_Score=115, Evalue=4e-26, Organism=Escherichia coli, GI48994963, Length=319, Percent_Identity=31.974921630094, Blast_Score=129, Evalue=3e-31, Organism=Caenorhabditis elegans, GI17568601, Length=314, Percent_Identity=31.8471337579618, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17565728, Length=271, Percent_Identity=33.9483394833948, Blast_Score=116, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6322608, Length=318, Percent_Identity=32.7044025157233, Blast_Score=141, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6322002, Length=318, Percent_Identity=31.4465408805031, Blast_Score=135, Evalue=6e-33, Organism=Drosophila melanogaster, GI24641779, Length=350, Percent_Identity=29.7142857142857, Blast_Score=150, Evalue=1e-36,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005786 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 37778; Mature: 37647
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLENLDWKNLGFSYIKTDFRFIATYKNGSWSQGELVSENVLQISEGSPVLHYGQACFE CCCCCCCCCCCCCHHHHHCCEEEEEEECCCCCCCCCHHHCCCEEECCCCCHHHHHHHHHH GLKAYRSQDGKALLFRPLENAKRLQTSCERLLMPKVSEELFLRACTEAIKANMKWLAPYK HHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECC SGASLYLRPFVIGVGDNLGVKPANEYLFIVFCVPVGAYFKGGIEKGGARFITTTFDRAAP CCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECHHHHHHCCCCCCCCEEEEEEHHHCCC KGTGGVKVGGNYAASLLAHKMALEQGYDDCIYLDPTTHTKIEEVGAANFFGITHDNTFIT CCCCCEEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCCCCEEEEEECCCEEEC PHSPSVLPSITRKSLMFLAQEYLGLKVEEKEILIDKLDVFKEAGACGTAAIITPIKEIVH CCCCCCCHHHHHHHHHHHHHHHHCCEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH HNKSYFFETPGHVTKRLYDLLLSIQQGEQKAPKDWVLEVN CCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEC >Mature Secondary Structure ANLENLDWKNLGFSYIKTDFRFIATYKNGSWSQGELVSENVLQISEGSPVLHYGQACFE CCCCCCCCCCCCHHHHHCCEEEEEEECCCCCCCCCHHHCCCEEECCCCCHHHHHHHHHH GLKAYRSQDGKALLFRPLENAKRLQTSCERLLMPKVSEELFLRACTEAIKANMKWLAPYK HHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECC SGASLYLRPFVIGVGDNLGVKPANEYLFIVFCVPVGAYFKGGIEKGGARFITTTFDRAAP CCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECHHHHHHCCCCCCCCEEEEEEHHHCCC KGTGGVKVGGNYAASLLAHKMALEQGYDDCIYLDPTTHTKIEEVGAANFFGITHDNTFIT CCCCCEEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCCCCEEEEEECCCEEEC PHSPSVLPSITRKSLMFLAQEYLGLKVEEKEILIDKLDVFKEAGACGTAAIITPIKEIVH CCCCCCCHHHHHHHHHHHHHHHHCCEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH HNKSYFFETPGHVTKRLYDLLLSIQQGEQKAPKDWVLEVN CCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]