| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109948183
Identifier: 109948183
GI number: 109948183
Start: 1487599
End: 1487922
Strand: Reverse
Name: 109948183
Synonym: Hac_1715
Alternate gene names: NA
Gene position: 1487922-1487599 (Counterclockwise)
Preceding gene: 109948185
Following gene: 109948178
Centisome position: 95.75
GC content: 32.1
Gene sequence:
>324_bases ATGGAGCTATCAAAAGATTTGAAATTTTTAACGCAAGCTAATGAAAATAATTTGCCCATTTATGAAAGAGGGCAAAGGGA TAAAATCATTAAACGCTGTGAGAAATCGCTTAATTTTTTACAGAAAGAGTTGCAATGTTTTAAAACCTTATCAAAAAGCG CAAGCATAACTTTAGAAAGCTTGCAAAATAACCATCAAACCACAGCCATTGCACAAGACACGCAAGAAAACACAAACGCG CTCAAAAAAATACCACTCAAAGATTTTAACAAAACTACCAATGAATCCATAAACCCTAACAATAACTATGAAATGGATTT TTAA
Upstream 100 bases:
>100_bases TAAACAGAATTGGCTCAATCTTTTAGAACATTTAAGAAGACTTGAATAGGAAAATTATTGTTTTGCTAAGAAACGAAAAG AATTCTTAGAGACTAGAGCG
Downstream 100 bases:
>100_bases AACCATCCATAAAATTAAATAACTTTATTTAGCGTATTTTTGAACCAATTCTTCTAAAGTGAAGCCTTTGTTATCGTCCC TCAATTGCTCTTTTTGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MELSKDLKFLTQANENNLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLSKSASITLESLQNNHQTTAIAQDTQENTNA LKKIPLKDFNKTTNESINPNNNYEMDF
Sequences:
>Translated_107_residues MELSKDLKFLTQANENNLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLSKSASITLESLQNNHQTTAIAQDTQENTNA LKKIPLKDFNKTTNESINPNNNYEMDF >Mature_107_residues MELSKDLKFLTQANENNLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLSKSASITLESLQNNHQTTAIAQDTQENTNA LKKIPLKDFNKTTNESINPNNNYEMDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12426; Mature: 12426
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELSKDLKFLTQANENNLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLSKSASITLES CCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQNNHQTTAIAQDTQENTNALKKIPLKDFNKTTNESINPNNNYEMDF HHCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MELSKDLKFLTQANENNLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLSKSASITLES CCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQNNHQTTAIAQDTQENTNALKKIPLKDFNKTTNESINPNNNYEMDF HHCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA