| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is ftsI, pbpB [H]
Identifier: 109948138
GI number: 109948138
Start: 1447806
End: 1449647
Strand: Reverse
Name: ftsI, pbpB [H]
Synonym: Hac_1663
Alternate gene names: 109948138
Gene position: 1449647-1447806 (Counterclockwise)
Preceding gene: 109948139
Following gene: 109948135
Centisome position: 93.29
GC content: 38.65
Gene sequence:
>1842_bases ATGGATAATAAAGATATTGATTCTCACTTCAACCTAGAGCAATTTTTACAAACCCAAAGATACAAGTGTGCTTCTACTGG TTTAGTTTTTTTATTGCTTTTTTTGTTTTTTTTGATAGTGGCGTTTTTCAAGGCTTTTTCTCCGCGATCCAACATGCCCA CTCTGATGGCAAGCAAGCAAGACATTGCTACTAGGGGGGCTATTTATAGTCAAGATAACTACAGCCTAGCCACTTCACAA ACCCTTTTCAAACTGGGCTTTGACACGAGGTTTTTAAACCCAAATAAAGAAGATTTTTTCATTGATTTCCTTTCTATTTA TAGCAATATCCCTAAAAAATCCTTAAAAGATGCGATCAACACGAAAGGCTACACGATTCTAGCTTATGATCTCACGCCCA ACACGGCTGCCAATCTTAAAGACTTGAACAGGAAATTTTTAGCCTTTGGGGTTTTTCAAAATTTCAAAGACGCGCACGAT AAAGTATGGCAAAAGCAAGGGTTAAATATTGAAGTGAGTGGCGTTTCTAGGTATTATCCTTATCAAAATAGCTTAGAGCC TATCATTGGCTATGTGCAAAAAAAAGAAGAAGACAAACTCACTCTCACTACCGGTAAAAAAGGCGTTGAAAAATCTCAAA ACCACTTGCTTAAAGCCCAACAAAATGGCGTAAGGACAGGCAAAAGAGATGTGGGTTTTAATTTCATTCAAAACCACTCT TACACCGAATTAGAGCGCCTTGATGGCTATGAAGTGTATTTAAGCATTCCTTTAAAGCTTCAAAGAGAAATTGAAACCTT GCTAGACAAAACCAAAGACAAACTCAAGGCTAAAGAAATCCTAGTGGGTATTATCAACCCTAAAAGTGGGGAAATTTTAT CTTTAGCTTCAAGCAATCGTTTTGATCCGAATGCGATTAAAGCCAGCGATTATGAAAACTTGAATTTGAGCGTTGCTGAA AAGGTTTTTGAGCCAGGCAGCACCATCAAACCCATTGTTTATTCCTTGCTACTAGATAAAAAATTGATCAACCCCAAAGA GCGCATTGATTTGAATCGTGGTTATCACCAACTAGGAAAATACACCATTAAAGACGATTTTATCCCTAGTAAAAAAGCCC TTGTTGAAGATGTTTTGATCCAATCTAGTAATGTAGGCATGATAAAAATCAGCAAAAATCTCAACCCAGAGGATTTCTAT AATGGGCTTTTAGGCTATGGATTTTCTCAAAAAACTGGTATCGACTTATCTTTAGAAGCCACAGGAAAGATCCCTCCTTT GTCCGCTTTCAAGCGCGAAGTGTTAAAAGGCAGCGTCTCTTATGGCTATGGGTTGAATGCGACTTTTTTGCAGCTTTTAA GGGCTTATGCGGTGTTTTCTAATGAAGGTAAATTAACCACCCCCTATTTAGTGCAACGAGAAACCGCCCCTAATGGCGAT ATTTACATCCCTAGCCCCAAACCAACTTTTCAAGTCATTAGCCCAAAAAGCGCTAGAAAAATGAAAGAAACCTTAATTAA AGTGGTGCGTTATGGCACAGGCAAAAACGCTCAATTTGAAGGGCTATACATAGGGGGTAAAACAGGCACCGCTAGGGTGG CAAAAAACGGGAGTTATAGCACGGAGTCCTACAACAGCTCTTTTTTTGGGTTTGCTGAAGATGAAAAGCAAGCTTTTACC ATTGGCGTGGTTATCTTAGGCTCGCATGGCAAGGAAGAATATTATGCCAGCAAGATTGCAGCCCCTATTTTTAAAGAAAT CACCGAAATTTTAGTGCGTTACAATTATCTCTCTCCCTCTGTTGCAATTCAAAATGCTTTGGAAAAGAATCGTTTGAAGT AA
Upstream 100 bases:
>100_bases CTTTTTTTGCTACACCCAATTTTAATGGATCTTGTCATCAAAATTCACACTCCCATGCGTTGTGAAACTCCAACGCCACG CCATTTCTAAGTAAGCACTC
Downstream 100 bases:
>100_bases GGCTAGAATTTAGAGTAAAATGCATGAAAGATTTTATAAAAAATTAAGCCCGCTAAAGATAAAAATAATACCCAATAAAT TGCCATGCTTTTGATCGAGA
Product: cell division protein FtsI/penicillin-binding protein
Products: NA
Alternate protein names: PBP-2B; Penicillin-binding protein B [H]
Number of amino acids: Translated: 613; Mature: 613
Protein sequence:
>613_residues MDNKDIDSHFNLEQFLQTQRYKCASTGLVFLLLFLFFLIVAFFKAFSPRSNMPTLMASKQDIATRGAIYSQDNYSLATSQ TLFKLGFDTRFLNPNKEDFFIDFLSIYSNIPKKSLKDAINTKGYTILAYDLTPNTAANLKDLNRKFLAFGVFQNFKDAHD KVWQKQGLNIEVSGVSRYYPYQNSLEPIIGYVQKKEEDKLTLTTGKKGVEKSQNHLLKAQQNGVRTGKRDVGFNFIQNHS YTELERLDGYEVYLSIPLKLQREIETLLDKTKDKLKAKEILVGIINPKSGEILSLASSNRFDPNAIKASDYENLNLSVAE KVFEPGSTIKPIVYSLLLDKKLINPKERIDLNRGYHQLGKYTIKDDFIPSKKALVEDVLIQSSNVGMIKISKNLNPEDFY NGLLGYGFSQKTGIDLSLEATGKIPPLSAFKREVLKGSVSYGYGLNATFLQLLRAYAVFSNEGKLTTPYLVQRETAPNGD IYIPSPKPTFQVISPKSARKMKETLIKVVRYGTGKNAQFEGLYIGGKTGTARVAKNGSYSTESYNSSFFGFAEDEKQAFT IGVVILGSHGKEEYYASKIAAPIFKEITEILVRYNYLSPSVAIQNALEKNRLK
Sequences:
>Translated_613_residues MDNKDIDSHFNLEQFLQTQRYKCASTGLVFLLLFLFFLIVAFFKAFSPRSNMPTLMASKQDIATRGAIYSQDNYSLATSQ TLFKLGFDTRFLNPNKEDFFIDFLSIYSNIPKKSLKDAINTKGYTILAYDLTPNTAANLKDLNRKFLAFGVFQNFKDAHD KVWQKQGLNIEVSGVSRYYPYQNSLEPIIGYVQKKEEDKLTLTTGKKGVEKSQNHLLKAQQNGVRTGKRDVGFNFIQNHS YTELERLDGYEVYLSIPLKLQREIETLLDKTKDKLKAKEILVGIINPKSGEILSLASSNRFDPNAIKASDYENLNLSVAE KVFEPGSTIKPIVYSLLLDKKLINPKERIDLNRGYHQLGKYTIKDDFIPSKKALVEDVLIQSSNVGMIKISKNLNPEDFY NGLLGYGFSQKTGIDLSLEATGKIPPLSAFKREVLKGSVSYGYGLNATFLQLLRAYAVFSNEGKLTTPYLVQRETAPNGD IYIPSPKPTFQVISPKSARKMKETLIKVVRYGTGKNAQFEGLYIGGKTGTARVAKNGSYSTESYNSSFFGFAEDEKQAFT IGVVILGSHGKEEYYASKIAAPIFKEITEILVRYNYLSPSVAIQNALEKNRLK >Mature_613_residues MDNKDIDSHFNLEQFLQTQRYKCASTGLVFLLLFLFFLIVAFFKAFSPRSNMPTLMASKQDIATRGAIYSQDNYSLATSQ TLFKLGFDTRFLNPNKEDFFIDFLSIYSNIPKKSLKDAINTKGYTILAYDLTPNTAANLKDLNRKFLAFGVFQNFKDAHD KVWQKQGLNIEVSGVSRYYPYQNSLEPIIGYVQKKEEDKLTLTTGKKGVEKSQNHLLKAQQNGVRTGKRDVGFNFIQNHS YTELERLDGYEVYLSIPLKLQREIETLLDKTKDKLKAKEILVGIINPKSGEILSLASSNRFDPNAIKASDYENLNLSVAE KVFEPGSTIKPIVYSLLLDKKLINPKERIDLNRGYHQLGKYTIKDDFIPSKKALVEDVLIQSSNVGMIKISKNLNPEDFY NGLLGYGFSQKTGIDLSLEATGKIPPLSAFKREVLKGSVSYGYGLNATFLQLLRAYAVFSNEGKLTTPYLVQRETAPNGD IYIPSPKPTFQVISPKSARKMKETLIKVVRYGTGKNAQFEGLYIGGKTGTARVAKNGSYSTESYNSSFFGFAEDEKQAFT IGVVILGSHGKEEYYASKIAAPIFKEITEILVRYNYLSPSVAIQNALEKNRLK
Specific function: Penicillin-binding proteins (PBPs) function in the late steps of murein biosynthesis. PBP-2B is required for vegetative cell division and sporulation septation. Beta-lactamase inactivates the PBPs by acylating an essential serine residue in the active sit
COG id: COG0768
COG function: function code M; Cell division protein FtsI/penicillin-binding protein 2
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PASTA domains [H]
Homologues:
Organism=Escherichia coli, GI1786272, Length=587, Percent_Identity=25.3833049403748, Blast_Score=118, Evalue=1e-27, Organism=Escherichia coli, GI1786854, Length=593, Percent_Identity=24.9578414839798, Blast_Score=97, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR005543 - InterPro: IPR005311 - InterPro: IPR001460 [H]
Pfam domain/function: PF03793 PASTA; PF03717 PBP_dimer; PF00905 Transpeptidase [H]
EC number: NA
Molecular weight: Translated: 69021; Mature: 69021
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNKDIDSHFNLEQFLQTQRYKCASTGLVFLLLFLFFLIVAFFKAFSPRSNMPTLMASKQ CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCH DIATRGAIYSQDNYSLATSQTLFKLGFDTRFLNPNKEDFFIDFLSIYSNIPKKSLKDAIN HHHHCCCEEECCCCCCHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHCCCCHHHHHHHHC TKGYTILAYDLTPNTAANLKDLNRKFLAFGVFQNFKDAHDKVWQKQGLNIEVSGVSRYYP CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEECC YQNSLEPIIGYVQKKEEDKLTLTTGKKGVEKSQNHLLKAQQNGVRTGKRDVGFNFIQNHS CCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHCCCHHHCCCC YTELERLDGYEVYLSIPLKLQREIETLLDKTKDKLKAKEILVGIINPKSGEILSLASSNR CHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEECCCCC FDPNAIKASDYENLNLSVAEKVFEPGSTIKPIVYSLLLDKKLINPKERIDLNRGYHQLGK CCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHCC YTIKDDFIPSKKALVEDVLIQSSNVGMIKISKNLNPEDFYNGLLGYGFSQKTGIDLSLEA EEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEEEC TGKIPPLSAFKREVLKGSVSYGYGLNATFLQLLRAYAVFSNEGKLTTPYLVQRETAPNGD CCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCC IYIPSPKPTFQVISPKSARKMKETLIKVVRYGTGKNAQFEGLYIGGKTGTARVAKNGSYS EECCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEECCCCCC TESYNSSFFGFAEDEKQAFTIGVVILGSHGKEEYYASKIAAPIFKEITEILVRYNYLSPS CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH VAIQNALEKNRLK HHHHHHHHHCCCC >Mature Secondary Structure MDNKDIDSHFNLEQFLQTQRYKCASTGLVFLLLFLFFLIVAFFKAFSPRSNMPTLMASKQ CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCH DIATRGAIYSQDNYSLATSQTLFKLGFDTRFLNPNKEDFFIDFLSIYSNIPKKSLKDAIN HHHHCCCEEECCCCCCHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHCCCCHHHHHHHHC TKGYTILAYDLTPNTAANLKDLNRKFLAFGVFQNFKDAHDKVWQKQGLNIEVSGVSRYYP CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEECC YQNSLEPIIGYVQKKEEDKLTLTTGKKGVEKSQNHLLKAQQNGVRTGKRDVGFNFIQNHS CCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHCCCHHHCCCC YTELERLDGYEVYLSIPLKLQREIETLLDKTKDKLKAKEILVGIINPKSGEILSLASSNR CHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEECCCCC FDPNAIKASDYENLNLSVAEKVFEPGSTIKPIVYSLLLDKKLINPKERIDLNRGYHQLGK CCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHCC YTIKDDFIPSKKALVEDVLIQSSNVGMIKISKNLNPEDFYNGLLGYGFSQKTGIDLSLEA EEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEEEC TGKIPPLSAFKREVLKGSVSYGYGLNATFLQLLRAYAVFSNEGKLTTPYLVQRETAPNGD CCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCC IYIPSPKPTFQVISPKSARKMKETLIKVVRYGTGKNAQFEGLYIGGKTGTARVAKNGSYS EECCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEECCCCCC TESYNSSFFGFAEDEKQAFTIGVVILGSHGKEEYYASKIAAPIFKEITEILVRYNYLSPS CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH VAIQNALEKNRLK HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8244929; 9384377; 8289242 [H]