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The map label for this gene is 109948126

Identifier: 109948126

GI number: 109948126

Start: 1434467

End: 1434757

Strand: Reverse

Name: 109948126

Synonym: Hac_1648

Alternate gene names: NA

Gene position: 1434757-1434467 (Counterclockwise)

Preceding gene: 109948128

Following gene: 109948125

Centisome position: 92.33

GC content: 38.14

Gene sequence:

>291_bases
ATGAAAAAGTTTATTTTGGCTTTGGGCGTTTTGGCATCCGCAAACACTTTAATGGCAACCGATGTTGAAGCTCTTGCAAA
AGGTTGTGCCGCTTGTCATGGGGTTAAATTTGAAAAGAAGGCTTTAGGTAAGAGTTTAGTTGTTAACACTTTGAGCGAAA
AAGAAATTATAGAATGGCTTATGGACTTTAAAACCGGTAAGAAAAAAAGCCCTATCATGAACGCGCAAGCTAAGAAATTG
AGCGATGAAGACATCAAGGCTTTAGCTAAATACATCCCCACTCTCAAATAA

Upstream 100 bases:

>100_bases
AAATCATATTTATTTCTCTCATTTTTACTTTATTTTAAGCAAAGCTTAAACTTGGAATTGTATCATTTTAGGATTATTTT
GATAAATAAGGAGATGAACT

Downstream 100 bases:

>100_bases
ACTCTCTTGATTTCAATAGTGCTTTTGGCACTATTTTGATTGGTTTCAAACTATTTTTTCTTATTCTTGTTTTTCATTGC
ATTCTTAACCCTACTTAAAG

Product: cytochrome c-553

Products: NA

Alternate protein names: Cytochrome c553 [H]

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MKKFILALGVLASANTLMATDVEALAKGCAACHGVKFEKKALGKSLVVNTLSEKEIIEWLMDFKTGKKKSPIMNAQAKKL
SDEDIKALAKYIPTLK

Sequences:

>Translated_96_residues
MKKFILALGVLASANTLMATDVEALAKGCAACHGVKFEKKALGKSLVVNTLSEKEIIEWLMDFKTGKKKSPIMNAQAKKL
SDEDIKALAKYIPTLK
>Mature_96_residues
MKKFILALGVLASANTLMATDVEALAKGCAACHGVKFEKKALGKSLVVNTLSEKEIIEWLMDFKTGKKKSPIMNAQAKKL
SDEDIKALAKYIPTLK

Specific function: Natural electron acceptor for a formate dehydrogenase [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 10439; Mature: 10439

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFILALGVLASANTLMATDVEALAKGCAACHGVKFEKKALGKSLVVNTLSEKEIIEWL
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHH
MDFKTGKKKSPIMNAQAKKLSDEDIKALAKYIPTLK
HHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKFILALGVLASANTLMATDVEALAKGCAACHGVKFEKKALGKSLVVNTLSEKEIIEWL
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHH
MDFKTGKKKSPIMNAQAKKLSDEDIKALAKYIPTLK
HHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]