| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109948123
Identifier: 109948123
GI number: 109948123
Start: 1432086
End: 1432628
Strand: Reverse
Name: 109948123
Synonym: Hac_1645
Alternate gene names: NA
Gene position: 1432628-1432086 (Counterclockwise)
Preceding gene: 109948124
Following gene: 109948122
Centisome position: 92.19
GC content: 37.2
Gene sequence:
>543_bases ATGAAAGATTTCTATGATTGGATCAGGGAATTTGTGCGCGATCAGGGTGAGTTTATTGCCCAACAAAGTGGGTGGTTAGA ATTAGAGCGTTCAAGCTATGCAAAACTCATGGCGCAAGCCATTTCGCATGTGCTTAATGGCGGTTCGCTGTTAGTGAGCG TGGATTCTTCTAGGCACTGGTTTTTAAACTACATTCTTTCTAACTTAAACCCTAAAGATTTAAAAGAGCGTCCTTTATTG TCTGTCATTGATTTTAACGCTTCTTCTTTCTACCCCAAAAATGACGCAAACCTCTCTCTAGCCACCATAGAGCTCACTTA TCAAAACCCCATGTTTTGGCATATTGGCAAAATTGAAAATGAAGGCTTAAAAACGATACTACTAAGTAAAATCCCTAGTT TTTTATGGCTTTTTGAAGAGCTTAAAGAAGACTGCTTGCTTTTAAAAGAGCATGATAGTTTGTTAGATTATAAATTATTG CAACTCTTCAAACTCTTTGAAAACGCGCTTTTTAGCGTGCTATACAATAAGGTTACTTTATGA
Upstream 100 bases:
>100_bases TGATGATTTCTACAAGCGAAATTAAAATTTCTGTTTTAATTGATATTAAATACGCGGAATTAGCCGTTAGAACTTTGCAT GCGGTGTATGAATTAGACAA
Downstream 100 bases:
>100_bases AAAATTTCAACCGCCTTATTTATACGGACAATCTTGAAGAAAGCTTAGAAGAAGTTGCAAGCCTTTTTGAACGCCACACT AAATTCTACACAGAAATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MKDFYDWIREFVRDQGEFIAQQSGWLELERSSYAKLMAQAISHVLNGGSLLVSVDSSRHWFLNYILSNLNPKDLKERPLL SVIDFNASSFYPKNDANLSLATIELTYQNPMFWHIGKIENEGLKTILLSKIPSFLWLFEELKEDCLLLKEHDSLLDYKLL QLFKLFENALFSVLYNKVTL
Sequences:
>Translated_180_residues MKDFYDWIREFVRDQGEFIAQQSGWLELERSSYAKLMAQAISHVLNGGSLLVSVDSSRHWFLNYILSNLNPKDLKERPLL SVIDFNASSFYPKNDANLSLATIELTYQNPMFWHIGKIENEGLKTILLSKIPSFLWLFEELKEDCLLLKEHDSLLDYKLL QLFKLFENALFSVLYNKVTL >Mature_180_residues MKDFYDWIREFVRDQGEFIAQQSGWLELERSSYAKLMAQAISHVLNGGSLLVSVDSSRHWFLNYILSNLNPKDLKERPLL SVIDFNASSFYPKNDANLSLATIELTYQNPMFWHIGKIENEGLKTILLSKIPSFLWLFEELKEDCLLLKEHDSLLDYKLL QLFKLFENALFSVLYNKVTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21044; Mature: 21044
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDFYDWIREFVRDQGEFIAQQSGWLELERSSYAKLMAQAISHVLNGGSLLVSVDSSRHW CCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHH FLNYILSNLNPKDLKERPLLSVIDFNASSFYPKNDANLSLATIELTYQNPMFWHIGKIEN HHHHHHHCCCCCHHHHCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCEEEEECCCCC EGLKTILLSKIPSFLWLFEELKEDCLLLKEHDSLLDYKLLQLFKLFENALFSVLYNKVTL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKDFYDWIREFVRDQGEFIAQQSGWLELERSSYAKLMAQAISHVLNGGSLLVSVDSSRHW CCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHH FLNYILSNLNPKDLKERPLLSVIDFNASSFYPKNDANLSLATIELTYQNPMFWHIGKIEN HHHHHHHCCCCCHHHHCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCEEEEECCCCC EGLKTILLSKIPSFLWLFEELKEDCLLLKEHDSLLDYKLLQLFKLFENALFSVLYNKVTL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA