| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
Click here to switch to the map view.
The map label for this gene is 109948117
Identifier: 109948117
GI number: 109948117
Start: 1426748
End: 1427299
Strand: Reverse
Name: 109948117
Synonym: Hac_1639
Alternate gene names: NA
Gene position: 1427299-1426748 (Counterclockwise)
Preceding gene: 109948118
Following gene: 109948116
Centisome position: 91.85
GC content: 35.51
Gene sequence:
>552_bases ATGAGACTCAAACTAACCCATATAACGCATGTAAGCCATAAGATTGCCAACGACTTTACCCATTCAGAATTACTAGAATT AAAAGCTCCTAGGGAATCATTGTGTACCTTGATAGAAGAAATTTTGGAAAAAAGCGTTAAAAAAGAAAACGCCATAGATG AGCAAGCCAGGGAGCTTTTAGAAGAAAACACGGACGAAATAGAATTCATGCGAATGGATGAAAGGCAGCTTTTTTGGATG ATTAAAAGGCAAATCGCTCAAAAAGAAGGCTTTCATTTGTTTTGGGAAGAAAGGTGCAACGATTTATCGCACCAAATTTT GAATAAAATCTTAGATGAAGATTTGATCATGTTTAGCGTGTCTGAAAATTTGATAAGAAACTTGATTTACAAATCCATTG ACACCTATTCTAAGGCGTATGAAAGCATTGAAAATGAAGTGCATGAAAAAATCAAGCATTACAAACGCAAATTACCCGTA GGGAGCGATGAATACGAACTCGTGTTTGAAAGGCTTTATGAAGAAGAATTAAGACGCAAAGGCTTTTTGTAA
Upstream 100 bases:
>100_bases TTAAACCCATGCTTTAAAAAGCATTTTATCTTTAAAAAGCATTTTATCTAAAGAGTGATAAAATACACTCTAAAAATAAA TAAAATACGCGAGAAAAATC
Downstream 100 bases:
>100_bases TGGTCTCTCTCTATTTAGAAAATGGGCTTTTTTTACAAGTGCAAAGTTTTGGGGCTAGCGGTACGCAAGTGGGGGAGCTT GTTTTTAACACTTCCATGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MRLKLTHITHVSHKIANDFTHSELLELKAPRESLCTLIEEILEKSVKKENAIDEQARELLEENTDEIEFMRMDERQLFWM IKRQIAQKEGFHLFWEERCNDLSHQILNKILDEDLIMFSVSENLIRNLIYKSIDTYSKAYESIENEVHEKIKHYKRKLPV GSDEYELVFERLYEEELRRKGFL
Sequences:
>Translated_183_residues MRLKLTHITHVSHKIANDFTHSELLELKAPRESLCTLIEEILEKSVKKENAIDEQARELLEENTDEIEFMRMDERQLFWM IKRQIAQKEGFHLFWEERCNDLSHQILNKILDEDLIMFSVSENLIRNLIYKSIDTYSKAYESIENEVHEKIKHYKRKLPV GSDEYELVFERLYEEELRRKGFL >Mature_183_residues MRLKLTHITHVSHKIANDFTHSELLELKAPRESLCTLIEEILEKSVKKENAIDEQARELLEENTDEIEFMRMDERQLFWM IKRQIAQKEGFHLFWEERCNDLSHQILNKILDEDLIMFSVSENLIRNLIYKSIDTYSKAYESIENEVHEKIKHYKRKLPV GSDEYELVFERLYEEELRRKGFL
Specific function: Unknown
COG id: COG2952
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22130; Mature: 22130
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLKLTHITHVSHKIANDFTHSELLELKAPRESLCTLIEEILEKSVKKENAIDEQARELL CCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH EENTDEIEFMRMDERQLFWMIKRQIAQKEGFHLFWEERCNDLSHQILNKILDEDLIMFSV HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH SENLIRNLIYKSIDTYSKAYESIENEVHEKIKHYKRKLPVGSDEYELVFERLYEEELRRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC GFL CCC >Mature Secondary Structure MRLKLTHITHVSHKIANDFTHSELLELKAPRESLCTLIEEILEKSVKKENAIDEQARELL CCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH EENTDEIEFMRMDERQLFWMIKRQIAQKEGFHLFWEERCNDLSHQILNKILDEDLIMFSV HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH SENLIRNLIYKSIDTYSKAYESIENEVHEKIKHYKRKLPVGSDEYELVFERLYEEELRRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC GFL CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA