| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is fragment 2
Identifier: 109948035
GI number: 109948035
Start: 1341910
End: 1342173
Strand: Reverse
Name: fragment 2
Synonym: Hac_1548
Alternate gene names: NA
Gene position: 1342173-1341910 (Counterclockwise)
Preceding gene: 109948036
Following gene: 109948034
Centisome position: 86.37
GC content: 37.5
Gene sequence:
>264_bases GTGCTTTATGAAGTTTATAAGCAACGAGCGTTGGACTATGGCGAGTTTTTAGAAAGCCAAAAAGAGAGCTTTATTGTAGA TGAGCAAAATCCTTATCCGCAAAAAGTCGCATTCAATGATCGGCGTTTAACGGAGTTTGATAGCGTTTTTAGCACGATTG TGCCTTTAGAAAATTTAAATAAAACCGCATGCACTCATCATGCCTTAAAGGCTTTACAAGCTACGAATAAGGATTTGGGC TTTGATGTAATAGAATTGGAGTAA
Upstream 100 bases:
>100_bases ATGAGTACCGAGCGATTTGAGCGTGCATTCTTTGATAATTTAGAAATAGAGTTAGAGCGATCCACACAAAATTTGAACCA AAAAATAGAGCCTGTTTTTA
Downstream 100 bases:
>100_bases ATCGTGCAAGGACTCATTCCTAGGGGCTATTTGTGGTATTTTGACGCAAATATTTTAGGGAATTTGGCGTTAGTGAGAGA AGAGTTGCTATTAGGGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MLYEVYKQRALDYGEFLESQKESFIVDEQNPYPQKVAFNDRRLTEFDSVFSTIVPLENLNKTACTHHALKALQATNKDLG FDVIELE
Sequences:
>Translated_87_residues MLYEVYKQRALDYGEFLESQKESFIVDEQNPYPQKVAFNDRRLTEFDSVFSTIVPLENLNKTACTHHALKALQATNKDLG FDVIELE >Mature_87_residues MLYEVYKQRALDYGEFLESQKESFIVDEQNPYPQKVAFNDRRLTEFDSVFSTIVPLENLNKTACTHHALKALQATNKDLG FDVIELE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10115; Mature: 10115
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYEVYKQRALDYGEFLESQKESFIVDEQNPYPQKVAFNDRRLTEFDSVFSTIVPLENLN CCHHHHHHHCCCHHHHHHHHHHCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHCCC KTACTHHALKALQATNKDLGFDVIELE HHHHHHHHHHHHHHCCCCCCCEEEEEC >Mature Secondary Structure MLYEVYKQRALDYGEFLESQKESFIVDEQNPYPQKVAFNDRRLTEFDSVFSTIVPLENLN CCHHHHHHHCCCHHHHHHHHHHCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHCCC KTACTHHALKALQATNKDLGFDVIELE HHHHHHHHHHHHHHCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA