Click here to switch to the map view.

The map label for this gene is omp29

Identifier: 109947949

GI number: 109947949

Start: 1259480

End: 1260340

Strand: Reverse

Name: omp29

Synonym: Hac_1453

Alternate gene names: NA

Gene position: 1260340-1259480 (Counterclockwise)

Preceding gene: 109947950

Following gene: 109947948

Centisome position: 81.11

GC content: 42.51

Gene sequence:

>861_bases
ATGAAAAAATCTGTTATAGCGAGTGCTGTCTCTCTAGTAATGACAAGTTTATTGTCAGCAGAGGCTCCCAAGCAAGAAAG
CACTATCAAGACAAGCCCCATCAAAAAGGGCGAAAGGAATGCCGCTTTTATAGGGATTGACTATCAGTTAGGTATGCTTA
GCACGACCGCTCAAAACTGTTCCAATGGCAATTGCAATGGCAGTCAAAGTGGGGGTTATGGCTCTAACACGCCTAACATG
CCTACAGCAAGCAATCCAACAGGAGGGCTTACCCATGGTGCTTTGGGGACTCGTGGGTATAAGGGCTTGAGTAACCAACA
ATACCCCATCAATGGTTTTGGTTTTATTGTAGGGTATAAGCATTTTTTGAAAAAGTCTCCGCAATTTGGATTCCGTTATT
ATGGGTTCTTTGATTTTGCAAGCTCTTATTATAGATATAATACTTTTAATAATTATGGCATGCAAGACGCTCGCAAGGGT
GCTCAAAACTTCATGTTTGGCTATGGTGCGGGCACAGATGTGTTGTTTAACCCAGCTATTTTCAATCGTGAGAAATTGCA
TTTTGGGTTTTTCTTTGGCGTTGCGATTGGGGGCACTTCTTGGGGACCCACTAACTACTATTTTAAGGATTTGGCGAACC
AATATAGAGGGAGTTTCCACCCTTCAAATTTCCAAGTCTTAGTGAATGGAGGGATCCGTTTAGGCACTAAACACCAAGGT
TTTGAAATTGGCTTGAAAATCCAAACCATTCGTAACAATTACTACACCGCTAGTGCGGACAATGTGCCTGAAGGGACGAC
TTATAAATTCACTTTCCACCGCCCCTACGCTTTCTATTGGCGCTACATTGTAAGCTTTTAA

Upstream 100 bases:

>100_bases
ATTGTTTTTATTCAATCGCTATTTTAATCAAAAAGCAAGTAATTTTATAGTAGAATGTAGCATTTAAAACTCAGATGAGA
AAAGTAGAAGGAAGGAATAC

Downstream 100 bases:

>100_bases
AACGCTTTTTAGTGGGGGAGTTAAAAAAGGTTTTTTATAGTCTTTTATAACTTTCTCGCATCAAAATCTTTTTCTTAAAA
TCCGCAAAACCGCTCAAGTA

Product: outer membrane protein 29

Products: NA

Alternate protein names: Outer Membrane Protein HopQ; Outer Membrane Protein HopZ; Outer Membrane Protein/Porin; Outer Membrane Protein HopW Protein (; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HorJ; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein HopD; Outer Membrane Function; Outer Membrane Protein HorK; Outer Membrane Protein HopB; Adhesin; Outer Membrane Protein HorF; Outer Membrane Protein HopE; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HorB; Outer Membrane Protein HopF; Outer Membrane Protein HopG

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MKKSVIASAVSLVMTSLLSAEAPKQESTIKTSPIKKGERNAAFIGIDYQLGMLSTTAQNCSNGNCNGSQSGGYGSNTPNM
PTASNPTGGLTHGALGTRGYKGLSNQQYPINGFGFIVGYKHFLKKSPQFGFRYYGFFDFASSYYRYNTFNNYGMQDARKG
AQNFMFGYGAGTDVLFNPAIFNREKLHFGFFFGVAIGGTSWGPTNYYFKDLANQYRGSFHPSNFQVLVNGGIRLGTKHQG
FEIGLKIQTIRNNYYTASADNVPEGTTYKFTFHRPYAFYWRYIVSF

Sequences:

>Translated_286_residues
MKKSVIASAVSLVMTSLLSAEAPKQESTIKTSPIKKGERNAAFIGIDYQLGMLSTTAQNCSNGNCNGSQSGGYGSNTPNM
PTASNPTGGLTHGALGTRGYKGLSNQQYPINGFGFIVGYKHFLKKSPQFGFRYYGFFDFASSYYRYNTFNNYGMQDARKG
AQNFMFGYGAGTDVLFNPAIFNREKLHFGFFFGVAIGGTSWGPTNYYFKDLANQYRGSFHPSNFQVLVNGGIRLGTKHQG
FEIGLKIQTIRNNYYTASADNVPEGTTYKFTFHRPYAFYWRYIVSF
>Mature_286_residues
MKKSVIASAVSLVMTSLLSAEAPKQESTIKTSPIKKGERNAAFIGIDYQLGMLSTTAQNCSNGNCNGSQSGGYGSNTPNM
PTASNPTGGLTHGALGTRGYKGLSNQQYPINGFGFIVGYKHFLKKSPQFGFRYYGFFDFASSYYRYNTFNNYGMQDARKG
AQNFMFGYGAGTDVLFNPAIFNREKLHFGFFFGVAIGGTSWGPTNYYFKDLANQYRGSFHPSNFQVLVNGGIRLGTKHQG
FEIGLKIQTIRNNYYTASADNVPEGTTYKFTFHRPYAFYWRYIVSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31765; Mature: 31765

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSVIASAVSLVMTSLLSAEAPKQESTIKTSPIKKGERNAAFIGIDYQLGMLSTTAQNC
CCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCEEEEEEEEEECCHHHHHHCC
SNGNCNGSQSGGYGSNTPNMPTASNPTGGLTHGALGTRGYKGLSNQQYPINGFGFIVGYK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHH
HFLKKSPQFGFRYYGFFDFASSYYRYNTFNNYGMQDARKGAQNFMFGYGAGTDVLFNPAI
HHHHCCCCCCEEEEEHHHHHCCCEEECCCCCCCCHHHHHHHHHCEEEECCCCCEEECCCC
FNREKLHFGFFFGVAIGGTSWGPTNYYFKDLANQYRGSFHPSNFQVLVNGGIRLGTKHQG
CCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCEEECCCCCC
FEIGLKIQTIRNNYYTASADNVPEGTTYKFTFHRPYAFYWRYIVSF
EEEEEEEEEEECCEEEECCCCCCCCCEEEEEECCCHHHHHHHHHCC
>Mature Secondary Structure
MKKSVIASAVSLVMTSLLSAEAPKQESTIKTSPIKKGERNAAFIGIDYQLGMLSTTAQNC
CCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCEEEEEEEEEECCHHHHHHCC
SNGNCNGSQSGGYGSNTPNMPTASNPTGGLTHGALGTRGYKGLSNQQYPINGFGFIVGYK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHH
HFLKKSPQFGFRYYGFFDFASSYYRYNTFNNYGMQDARKGAQNFMFGYGAGTDVLFNPAI
HHHHCCCCCCEEEEEHHHHHCCCEEECCCCCCCCHHHHHHHHHCEEEECCCCCEEECCCC
FNREKLHFGFFFGVAIGGTSWGPTNYYFKDLANQYRGSFHPSNFQVLVNGGIRLGTKHQG
CCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCEEECCCCCC
FEIGLKIQTIRNNYYTASADNVPEGTTYKFTFHRPYAFYWRYIVSF
EEEEEEEEEEECCEEEECCCCCCCCCEEEEEECCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA