Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

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The map label for this gene is Hac prophage I orf8

Identifier: 109947851

GI number: 109947851

Start: 1163269

End: 1163655

Strand: Reverse

Name: Hac prophage I orf8

Synonym: Hac_1342

Alternate gene names: NA

Gene position: 1163655-1163269 (Counterclockwise)

Preceding gene: 109947852

Following gene: 109947850

Centisome position: 74.88

GC content: 29.72

Gene sequence:

>387_bases
GTGATAACGGTCAACAGTCAATATCTGCCTTATGAATTACAAGATGTTGAGGATTCTGTATTTAAAATAGAAGATGATAT
AGATAAAATACACTTAGCGGATGGGTATGTTTGTGATAATCTGAATGATTATTTGGCTAATGATTTAATAGGTTTTTCTA
CAATTTTAAAATACTATAATTCCAATATATCTTTATCTTATTTAAAAGATATGGATACAAGTAGAGAACCGAATTTAAAA
GAGTGTGCCGCTGAATTTCATCACAAGATTATATCGAACAAAAATATTACGAAGGATGTGAGGCACGCTTTAATTCAAAC
TGGAAAAGCGACCAATCAGGCTTTAGGAGATTTAGATACAGTATATAACAGATACAAAAAAATATGA

Upstream 100 bases:

>100_bases
TTTTACAATCTGGATAACATTTCAATTCAGAATATGATAGATAAAAAAGACATTTTACAAGATATTGTGCTTAAAAAAGA
CAGCAATATAATTAGGTACG

Downstream 100 bases:

>100_bases
AATCAACACTTAAGAGTTTTATTTAATTATGAGTATGGATTTAATGCTAGTGTTGTAAAATTATATGGGCTATTGAGAGA
GCTAACGCCAAAGATACCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MITVNSQYLPYELQDVEDSVFKIEDDIDKIHLADGYVCDNLNDYLANDLIGFSTILKYYNSNISLSYLKDMDTSREPNLK
ECAAEFHHKIISNKNITKDVRHALIQTGKATNQALGDLDTVYNRYKKI

Sequences:

>Translated_128_residues
MITVNSQYLPYELQDVEDSVFKIEDDIDKIHLADGYVCDNLNDYLANDLIGFSTILKYYNSNISLSYLKDMDTSREPNLK
ECAAEFHHKIISNKNITKDVRHALIQTGKATNQALGDLDTVYNRYKKI
>Mature_128_residues
MITVNSQYLPYELQDVEDSVFKIEDDIDKIHLADGYVCDNLNDYLANDLIGFSTILKYYNSNISLSYLKDMDTSREPNLK
ECAAEFHHKIISNKNITKDVRHALIQTGKATNQALGDLDTVYNRYKKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14726; Mature: 14726

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVNSQYLPYELQDVEDSVFKIEDDIDKIHLADGYVCDNLNDYLANDLIGFSTILKYYN
CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCEEECCHHHHHHHHHHHHHHHHHHHC
SNISLSYLKDMDTSREPNLKECAAEFHHKIISNKNITKDVRHALIQTGKATNQALGDLDT
CCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
VYNRYKKI
HHHHHHCC
>Mature Secondary Structure
MITVNSQYLPYELQDVEDSVFKIEDDIDKIHLADGYVCDNLNDYLANDLIGFSTILKYYN
CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCEEECCHHHHHHHHHHHHHHHHHHHC
SNISLSYLKDMDTSREPNLKECAAEFHHKIISNKNITKDVRHALIQTGKATNQALGDLDT
CCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
VYNRYKKI
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA