| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
Click here to switch to the map view.
The map label for this gene is Hac prophage I orf7 [H]
Identifier: 109947850
GI number: 109947850
Start: 1161236
End: 1161766
Strand: Reverse
Name: Hac prophage I orf7 [H]
Synonym: Hac_1341
Alternate gene names: 109947850
Gene position: 1161766-1161236 (Counterclockwise)
Preceding gene: 109947851
Following gene: 109947849
Centisome position: 74.76
GC content: 42.75
Gene sequence:
>531_bases ATGAAATTCTCAACCCAACCACTAAGCAACAACGAGCTAAAACGACTAGCCCCTTCGCTCTTTACAGCAGAGCCATACTA TGAAGCCAGTGATAAATACCACTTCATATCCACCATTGACATTATAGAGGAAATTCGCTTTCACGCTTGGTATCCAGTCG CCGTGAGCGAAGCAAGTGTCCGTAACGAAGACAAAGAGGGTTATCAACAGCACTATGTCAGATTTCGCTACCTTGATGAC TTCTTACGCCCAAGTGAAAACTGCGTAGAACTTTTGCTTTTCAATTCCCACGACAGAAGCAAATGCTTTACTATAAGTGC AGGCGTATTTCGCTTTGTATGCGCTAATGGCTTAGTAGTAGCTGATGAAGTATTTGAGAGCTACCAAATCAAACACATAG GCGAAAAAGCAAACGGTGTCGCGGTAGCCATTCCTAGCATAGTCCAAGCTAAAGATAAAATAATGGATAAAATCTCAACC TTTAGCCAAATCACTCTCACAGAGCAAGACAAGATAAGCTTCGCCAGCTAG
Upstream 100 bases:
>100_bases CCATCTCAAATTCACAAGGAGAAACAATGCAAGCAACAACCATAATCACCATAGCCATAGTAGCCCTACAAATACTACAA GACGCAATGGAGGACAAACA
Downstream 100 bases:
>100_bases CAGTCTAATATTTGAACCACATCTAAAAATCAAACACGATGATTTGCTTATCCCACACCGAAGCGAGGATGAAAAGGATG ACCTTTACACCACATTTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MKFSTQPLSNNELKRLAPSLFTAEPYYEASDKYHFISTIDIIEEIRFHAWYPVAVSEASVRNEDKEGYQQHYVRFRYLDD FLRPSENCVELLLFNSHDRSKCFTISAGVFRFVCANGLVVADEVFESYQIKHIGEKANGVAVAIPSIVQAKDKIMDKIST FSQITLTEQDKISFAS
Sequences:
>Translated_176_residues MKFSTQPLSNNELKRLAPSLFTAEPYYEASDKYHFISTIDIIEEIRFHAWYPVAVSEASVRNEDKEGYQQHYVRFRYLDD FLRPSENCVELLLFNSHDRSKCFTISAGVFRFVCANGLVVADEVFESYQIKHIGEKANGVAVAIPSIVQAKDKIMDKIST FSQITLTEQDKISFAS >Mature_176_residues MKFSTQPLSNNELKRLAPSLFTAEPYYEASDKYHFISTIDIIEEIRFHAWYPVAVSEASVRNEDKEGYQQHYVRFRYLDD FLRPSENCVELLLFNSHDRSKCFTISAGVFRFVCANGLVVADEVFESYQIKHIGEKANGVAVAIPSIVQAKDKIMDKIST FSQITLTEQDKISFAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0380 family [H]
Homologues:
Organism=Escherichia coli, GI87081705, Length=161, Percent_Identity=26.0869565217391, Blast_Score=80, Evalue=9e-17, Organism=Escherichia coli, GI1788987, Length=130, Percent_Identity=29.2307692307692, Blast_Score=78, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009276 [H]
Pfam domain/function: PF06067 DUF932 [H]
EC number: NA
Molecular weight: Translated: 20163; Mature: 20163
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFSTQPLSNNELKRLAPSLFTAEPYYEASDKYHFISTIDIIEEIRFHAWYPVAVSEASV CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCEEECCHHH RNEDKEGYQQHYVRFRYLDDFLRPSENCVELLLFNSHDRSKCFTISAGVFRFVCANGLVV CCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCEEEEEHHHHHHHHHHCCCEE ADEVFESYQIKHIGEKANGVAVAIPSIVQAKDKIMDKISTFSQITLTEQDKISFAS HHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCC >Mature Secondary Structure MKFSTQPLSNNELKRLAPSLFTAEPYYEASDKYHFISTIDIIEEIRFHAWYPVAVSEASV CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCEEECCHHH RNEDKEGYQQHYVRFRYLDDFLRPSENCVELLLFNSHDRSKCFTISAGVFRFVCANGLVV CCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCEEEEEHHHHHHHHHHCCCEE ADEVFESYQIKHIGEKANGVAVAIPSIVQAKDKIMDKISTFSQITLTEQDKISFAS HHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2693941; 2315017 [H]