Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

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The map label for this gene is Hac prophage I orf7 [H]

Identifier: 109947850

GI number: 109947850

Start: 1161236

End: 1161766

Strand: Reverse

Name: Hac prophage I orf7 [H]

Synonym: Hac_1341

Alternate gene names: 109947850

Gene position: 1161766-1161236 (Counterclockwise)

Preceding gene: 109947851

Following gene: 109947849

Centisome position: 74.76

GC content: 42.75

Gene sequence:

>531_bases
ATGAAATTCTCAACCCAACCACTAAGCAACAACGAGCTAAAACGACTAGCCCCTTCGCTCTTTACAGCAGAGCCATACTA
TGAAGCCAGTGATAAATACCACTTCATATCCACCATTGACATTATAGAGGAAATTCGCTTTCACGCTTGGTATCCAGTCG
CCGTGAGCGAAGCAAGTGTCCGTAACGAAGACAAAGAGGGTTATCAACAGCACTATGTCAGATTTCGCTACCTTGATGAC
TTCTTACGCCCAAGTGAAAACTGCGTAGAACTTTTGCTTTTCAATTCCCACGACAGAAGCAAATGCTTTACTATAAGTGC
AGGCGTATTTCGCTTTGTATGCGCTAATGGCTTAGTAGTAGCTGATGAAGTATTTGAGAGCTACCAAATCAAACACATAG
GCGAAAAAGCAAACGGTGTCGCGGTAGCCATTCCTAGCATAGTCCAAGCTAAAGATAAAATAATGGATAAAATCTCAACC
TTTAGCCAAATCACTCTCACAGAGCAAGACAAGATAAGCTTCGCCAGCTAG

Upstream 100 bases:

>100_bases
CCATCTCAAATTCACAAGGAGAAACAATGCAAGCAACAACCATAATCACCATAGCCATAGTAGCCCTACAAATACTACAA
GACGCAATGGAGGACAAACA

Downstream 100 bases:

>100_bases
CAGTCTAATATTTGAACCACATCTAAAAATCAAACACGATGATTTGCTTATCCCACACCGAAGCGAGGATGAAAAGGATG
ACCTTTACACCACATTTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MKFSTQPLSNNELKRLAPSLFTAEPYYEASDKYHFISTIDIIEEIRFHAWYPVAVSEASVRNEDKEGYQQHYVRFRYLDD
FLRPSENCVELLLFNSHDRSKCFTISAGVFRFVCANGLVVADEVFESYQIKHIGEKANGVAVAIPSIVQAKDKIMDKIST
FSQITLTEQDKISFAS

Sequences:

>Translated_176_residues
MKFSTQPLSNNELKRLAPSLFTAEPYYEASDKYHFISTIDIIEEIRFHAWYPVAVSEASVRNEDKEGYQQHYVRFRYLDD
FLRPSENCVELLLFNSHDRSKCFTISAGVFRFVCANGLVVADEVFESYQIKHIGEKANGVAVAIPSIVQAKDKIMDKIST
FSQITLTEQDKISFAS
>Mature_176_residues
MKFSTQPLSNNELKRLAPSLFTAEPYYEASDKYHFISTIDIIEEIRFHAWYPVAVSEASVRNEDKEGYQQHYVRFRYLDD
FLRPSENCVELLLFNSHDRSKCFTISAGVFRFVCANGLVVADEVFESYQIKHIGEKANGVAVAIPSIVQAKDKIMDKIST
FSQITLTEQDKISFAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0380 family [H]

Homologues:

Organism=Escherichia coli, GI87081705, Length=161, Percent_Identity=26.0869565217391, Blast_Score=80, Evalue=9e-17,
Organism=Escherichia coli, GI1788987, Length=130, Percent_Identity=29.2307692307692, Blast_Score=78, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009276 [H]

Pfam domain/function: PF06067 DUF932 [H]

EC number: NA

Molecular weight: Translated: 20163; Mature: 20163

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFSTQPLSNNELKRLAPSLFTAEPYYEASDKYHFISTIDIIEEIRFHAWYPVAVSEASV
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCEEECCHHH
RNEDKEGYQQHYVRFRYLDDFLRPSENCVELLLFNSHDRSKCFTISAGVFRFVCANGLVV
CCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCEEEEEHHHHHHHHHHCCCEE
ADEVFESYQIKHIGEKANGVAVAIPSIVQAKDKIMDKISTFSQITLTEQDKISFAS
HHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCC
>Mature Secondary Structure
MKFSTQPLSNNELKRLAPSLFTAEPYYEASDKYHFISTIDIIEEIRFHAWYPVAVSEASV
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCEEECCHHH
RNEDKEGYQQHYVRFRYLDDFLRPSENCVELLLFNSHDRSKCFTISAGVFRFVCANGLVV
CCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCEEEEEHHHHHHHHHHCCCEE
ADEVFESYQIKHIGEKANGVAVAIPSIVQAKDKIMDKISTFSQITLTEQDKISFAS
HHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2693941; 2315017 [H]