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The map label for this gene is 109947827

Identifier: 109947827

GI number: 109947827

Start: 1134808

End: 1135161

Strand: Reverse

Name: 109947827

Synonym: Hac_1317

Alternate gene names: NA

Gene position: 1135161-1134808 (Counterclockwise)

Preceding gene: 109947828

Following gene: 109947826

Centisome position: 73.05

GC content: 37.29

Gene sequence:

>354_bases
ATGTGCGAATTAAATTCTTTTAACACGCCTTTTTCTCAAGATGAATGCAAAATCCATTCGTATTGCGTGGCGACTTTTTT
AGAGAAATATTTAAAAAAAGTTGTGTCTTTTCCCAAGTTTTTGAGGGTCGATCATGCACTTTTAGAAGACAATGTCAAGC
AAATCACAATCTATACCCACCCCATAGACATGGGGCATGTGATTGGTAAAGAGGGCAAAATGGTGAGCGCGATTAAAGCG
TTTGTTTCAGGCGTGAAAGCCAAAGATGGGTTTTCTTATAGAATCGTTGTTTTTGCTAATAACGATAAAAATAGCGATAA
AAATCCCCATGTTTTAGGTGATGAAACGCCTTGA

Upstream 100 bases:

>100_bases
GATTGATAAAGAGCGCTTGGATTACTGGAAAGGCGTGGGGGCTAAAATGAGCGAGAGAGTGGAGAAACTTTCTCAAAAAG
CTTAAGGTTTTATGGGTTAA

Downstream 100 bases:

>100_bases
ATTTTCCATGCTTTTAGTGGGCAGAATTGGTAAAAGCGTGGGGCTTAATGGGGGCTTAAAGCTTCATTTAGAGAGCGATT
TTCCGGAGTGCTTAAAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MCELNSFNTPFSQDECKIHSYCVATFLEKYLKKVVSFPKFLRVDHALLEDNVKQITIYTHPIDMGHVIGKEGKMVSAIKA
FVSGVKAKDGFSYRIVVFANNDKNSDKNPHVLGDETP

Sequences:

>Translated_117_residues
MCELNSFNTPFSQDECKIHSYCVATFLEKYLKKVVSFPKFLRVDHALLEDNVKQITIYTHPIDMGHVIGKEGKMVSAIKA
FVSGVKAKDGFSYRIVVFANNDKNSDKNPHVLGDETP
>Mature_117_residues
MCELNSFNTPFSQDECKIHSYCVATFLEKYLKKVVSFPKFLRVDHALLEDNVKQITIYTHPIDMGHVIGKEGKMVSAIKA
FVSGVKAKDGFSYRIVVFANNDKNSDKNPHVLGDETP

Specific function: Unknown

COG id: COG1837

COG function: function code R; Predicted RNA-binding protein (contains KH domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13196; Mature: 13196

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCELNSFNTPFSQDECKIHSYCVATFLEKYLKKVVSFPKFLRVDHALLEDNVKQITIYTH
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEEC
PIDMGHVIGKEGKMVSAIKAFVSGVKAKDGFSYRIVVFANNDKNSDKNPHVLGDETP
CCCCCCEECCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MCELNSFNTPFSQDECKIHSYCVATFLEKYLKKVVSFPKFLRVDHALLEDNVKQITIYTH
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEEC
PIDMGHVIGKEGKMVSAIKAFVSGVKAKDGFSYRIVVFANNDKNSDKNPHVLGDETP
CCCCCCEECCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA