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The map label for this gene is fragment 3

Identifier: 109947458

GI number: 109947458

Start: 797259

End: 797747

Strand: Reverse

Name: fragment 3

Synonym: Hac_0910

Alternate gene names: NA

Gene position: 797747-797259 (Counterclockwise)

Preceding gene: 109947459

Following gene: 109947454

Centisome position: 51.34

GC content: 34.36

Gene sequence:

>489_bases
TTGCAGGTGGAACAACAAAAAGCTGACATAAATTATAAAGATATTTCCAAAAAAGACATTATCCATTGCGAAAGCGTCAT
TATTAAATCAAGGGGTAACATAGGATTTGAATACTACGATCAGCCATTTTCTCACAAAAATGAAATTTGGTCGTATTCCT
CAAAAACTAACCAAACGCTAGTGAAATTTTTATACTACTACCTTTCTAATAATCAACATTATTTTCAAAAATTAGTGCAA
AGCTCATCGGTGAAAAACCCCCCCCAATTAAGCGTGTCTGATACAGATGAGCATGAGATGCCAATCCCACCCCTAGAAAT
CCAACAAGAGATTGTTAAGATTTTAGATCAATTTTCAGCTTTAACCACTGATTTGCAATCCGGTATCCTAGCCGAAATAG
GAGCGAGAAAAAAGCAATACGAGTATTACCGAGAAAAATTATTGACTTTCAAACCGCTAAATCCCCATAAAGATTTTAAA
AAATGCTAA

Upstream 100 bases:

>100_bases
TTAAAAAAATTGGGGAATTATTCAAAAGAAATGAGGGTATAAATATTGCAGTCGCACAAATGAAAAAACTGCACTCAGAG
ATTGGTTAAGGTTAGAATTT

Downstream 100 bases:

>100_bases
AAGTATTTTTCAAAATCAATAAAATAATTTTAAAGAGCTTGATTTTAATCAAGCGATAGTTTATTAAAAAAGCGGTCTTT
TAGGGGTTAGGGGGATTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: S protein [H]

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MQVEQQKADINYKDISKKDIIHCESVIIKSRGNIGFEYYDQPFSHKNEIWSYSSKTNQTLVKFLYYYLSNNQHYFQKLVQ
SSSVKNPPQLSVSDTDEHEMPIPPLEIQQEIVKILDQFSALTTDLQSGILAEIGARKKQYEYYREKLLTFKPLNPHKDFK
KC

Sequences:

>Translated_162_residues
MQVEQQKADINYKDISKKDIIHCESVIIKSRGNIGFEYYDQPFSHKNEIWSYSSKTNQTLVKFLYYYLSNNQHYFQKLVQ
SSSVKNPPQLSVSDTDEHEMPIPPLEIQQEIVKILDQFSALTTDLQSGILAEIGARKKQYEYYREKLLTFKPLNPHKDFK
KC
>Mature_162_residues
MQVEQQKADINYKDISKKDIIHCESVIIKSRGNIGFEYYDQPFSHKNEIWSYSSKTNQTLVKFLYYYLSNNQHYFQKLVQ
SSSVKNPPQLSVSDTDEHEMPIPPLEIQQEIVKILDQFSALTTDLQSGILAEIGARKKQYEYYREKLLTFKPLNPHKDFK
KC

Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. Subunit S dictates DNA sequences specificity [H]

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type-I restriction system S methylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000055 [H]

Pfam domain/function: PF01420 Methylase_S [H]

EC number: NA

Molecular weight: Translated: 19074; Mature: 19074

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVEQQKADINYKDISKKDIIHCESVIIKSRGNIGFEYYDQPFSHKNEIWSYSSKTNQTL
CCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHCCCCHHHHHH
VKFLYYYLSNNQHYFQKLVQSSSVKNPPQLSVSDTDEHEMPIPPLEIQQEIVKILDQFSA
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LTTDLQSGILAEIGARKKQYEYYREKLLTFKPLNPHKDFKKC
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCHHHCC
>Mature Secondary Structure
MQVEQQKADINYKDISKKDIIHCESVIIKSRGNIGFEYYDQPFSHKNEIWSYSSKTNQTL
CCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHCCCCHHHHHH
VKFLYYYLSNNQHYFQKLVQSSSVKNPPQLSVSDTDEHEMPIPPLEIQQEIVKILDQFSA
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LTTDLQSGILAEIGARKKQYEYYREKLLTFKPLNPHKDFKKC
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]