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The map label for this gene is lolA [H]

Identifier: 109947454

GI number: 109947454

Start: 790376

End: 790930

Strand: Reverse

Name: lolA [H]

Synonym: Hac_0905

Alternate gene names: 109947454

Gene position: 790930-790376 (Counterclockwise)

Preceding gene: 109947458

Following gene: 109947453

Centisome position: 50.9

GC content: 31.71

Gene sequence:

>555_bases
ATGAAAGCTTTTTTAAAGATTTTGATGGTTTTAATTTTTATAAGCGTCGCTCATGCTAAAAATCCTTTGACGCTTTCTAA
AGAAGAAGAGGTTTTGCATAATTTGCAAAGTTTTAGTGCACATTTCAAACAGGTTTTAAAAAATGAAAAGCCCTTAGTTT
ATTATGGGGTTTTAAAGGCTAAAGCCCCTAATCTGGCTTTATGGGTTTATGAAAAACCCTTAAAAAAAGAAATTTATATG
AACGATAAAGAAGTGGTGATTTATGAGCCTAATTTATTTCAAGCCACGATCACGCCCTTGAAAGACAAGACAGATTTTTT
TACCATTCTCAAGCAATTAAAAAAGCAAGCTGATGGCTCTTTTAAAACGATTATCAATAAAACCATTTATCGTTTGGTTT
TTAAAGACAGCAAACCTTTTTCGTTGGAATTTAAAGACGAAGTGAATAGTCCAGTCACGATCACTTTTTCTCAAGTAGAA
ATTAACCCTAAAATCGCTATTGAAATCTTTGTCTTTAAGCCTAAAGATGAAAATATTGATATTGTGCGCCAATGA

Upstream 100 bases:

>100_bases
AAGCGTCAGTTTTTAGCTCCATTTTAGCATGGATAAAATAAAAGTCTTGTAAAATAAAGGGTTTTATTGGAATAGGATAT
TATTTTAAGGTTTTACTATA

Downstream 100 bases:

>100_bases
TTTTAACTTTTCATTACTCTTTGTTAGTCAAAATGATCTAGAATATCAAGCATTTAAAAATTATGGGGCTGATTTTGGAT
TTCGACAGATTTCTTGTCGT

Product: outer-membrane lipoprotein carrier protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MKAFLKILMVLIFISVAHAKNPLTLSKEEEVLHNLQSFSAHFKQVLKNEKPLVYYGVLKAKAPNLALWVYEKPLKKEIYM
NDKEVVIYEPNLFQATITPLKDKTDFFTILKQLKKQADGSFKTIINKTIYRLVFKDSKPFSLEFKDEVNSPVTITFSQVE
INPKIAIEIFVFKPKDENIDIVRQ

Sequences:

>Translated_184_residues
MKAFLKILMVLIFISVAHAKNPLTLSKEEEVLHNLQSFSAHFKQVLKNEKPLVYYGVLKAKAPNLALWVYEKPLKKEIYM
NDKEVVIYEPNLFQATITPLKDKTDFFTILKQLKKQADGSFKTIINKTIYRLVFKDSKPFSLEFKDEVNSPVTITFSQVE
INPKIAIEIFVFKPKDENIDIVRQ
>Mature_184_residues
MKAFLKILMVLIFISVAHAKNPLTLSKEEEVLHNLQSFSAHFKQVLKNEKPLVYYGVLKAKAPNLALWVYEKPLKKEIYM
NDKEVVIYEPNLFQATITPLKDKTDFFTILKQLKKQADGSFKTIINKTIYRLVFKDSKPFSLEFKDEVNSPVTITFSQVE
INPKIAIEIFVFKPKDENIDIVRQ

Specific function: Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the l

COG id: COG2834

COG function: function code M; Outer membrane lipoprotein-sorting protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lolA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004564
- InterPro:   IPR018323 [H]

Pfam domain/function: PF03548 LolA [H]

EC number: NA

Molecular weight: Translated: 21381; Mature: 21381

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAFLKILMVLIFISVAHAKNPLTLSKEEEVLHNLQSFSAHFKQVLKNEKPLVYYGVLKA
CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC
KAPNLALWVYEKPLKKEIYMNDKEVVIYEPNLFQATITPLKDKTDFFTILKQLKKQADGS
CCCCEEEEEECCCCCHHHEECCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCH
FKTIINKTIYRLVFKDSKPFSLEFKDEVNSPVTITFSQVEINPKIAIEIFVFKPKDENID
HHHHHHHHHHHHHCCCCCCCEEEEHHCCCCCEEEEEEEEEECCEEEEEEEEECCCCCCEE
IVRQ
EEEC
>Mature Secondary Structure
MKAFLKILMVLIFISVAHAKNPLTLSKEEEVLHNLQSFSAHFKQVLKNEKPLVYYGVLKA
CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC
KAPNLALWVYEKPLKKEIYMNDKEVVIYEPNLFQATITPLKDKTDFFTILKQLKKQADGS
CCCCEEEEEECCCCCHHHEECCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCH
FKTIINKTIYRLVFKDSKPFSLEFKDEVNSPVTITFSQVEINPKIAIEIFVFKPKDENID
HHHHHHHHHHHHHCCCCCCCEEEEHHCCCCCEEEEEEEEEECCEEEEEEEEECCCCCCEE
IVRQ
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA