| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is fecA [H]
Identifier: 109947418
GI number: 109947418
Start: 755701
End: 758004
Strand: Reverse
Name: fecA [H]
Synonym: Hac_0865
Alternate gene names: 109947418
Gene position: 758004-755701 (Counterclockwise)
Preceding gene: 109947419
Following gene: 109947416
Centisome position: 48.78
GC content: 37.28
Gene sequence:
>2304_bases ATGAAAAGAATATTAGTCTCTCTAGCTGTTTTGAGTCATGGCGTGCATGCTGTAGAAACTCATAATCTAGAAAGAGTAGA AGCTTCAGGGAGAGCCAACAATGAAGAAGCGCCTTTAAGTTGGAGAAGCAAAGAAGTTAGAAACTATATGGGATCTCGCA CGGTTATTTCTAACAAACAACTCACTGAAGGTGCGAATCAAAGCATTGAAGAAGCCTTGCAAAATGTGCCAGGCGTGCAT ATTAGAAACGCTACAGGTATTGGAGCTGTGCCTAGCTTTTCTGTTAGAGGTTTTGGTGGGGGGAGTTCAGGGCATTCTAA TACAGGAATGATTTTAGTGAATGGGATCCCTGTTTATGTCGCTCCCTATGTTGATATTGGCATGCCTATTTTCCCTGTAA CCTTTCAATCTGTGGATAGAATCAGTGTGACTAAGGGTGGGGAGAGCGTGCGTTATGGTCCTAATGTTTTTGGCGGCGTG ATTAATGTGATCACTAAAGGCATTCCTACCAAGTGGGATAGTCAAGCGAGTGAGAGAGCCACTTTTTGGGGCAAGTCTGA AAATGGAGGGTTTTTCAATCAAAATTCTAAAAACCTTGATAAAAGCTTAGCCAATAACATGCTTTTTGACACCTATTTAA AAACAGGGGGTATGATGAATAAGCATTTTGGAATTCAGGCTCAAGCGAATTGGATCAAAGGGCAAGGGTTTAGATACAAC AGCCCTACAAATATTCAAAATTACATTCTAGATTCGTTGTATCAAATCAATGATAGCAATAAAATCACCGCTTTTTTTCA ATACTATAATTATTTTATGGCAGATCCGGGATCTTTAGGTATAGCTGCTTATAATCAAAATCGTTTTCAAAACAACCGCC CTAATAACAATAAAAGCGGAAGAGCGAAGCGATGGGGGGCTGTGTATCAAAACTTTTTTGGGGACACGGATAAAATAGGG GGGGATTTCACTTTTAGTTACTATGGGCATGACATGTCAAGGGATTTTCAATTTGATTCTAATTTTTTGAATGTCAATAC TAATCCTAAATTAGGTCCTGTTTATACGGATCAAAATTATCCAGGATTTTTTATCTTTGATCATTTAAGGCGCTATATTA TGAATGCATTTGAACCTAATTTAAACTTAGTTGTCAATACTAATAAAGTTAAGCAAACTTTTAATGTGGGCATGCGTTTT ATGACAATGGATATGTATTTTAGATTGGATCAAAGCACATGTGAAAAAGCAAATATTATTGATGGCGTGTGTCATATGCC CCCTTTTGTCCTTTCTAAAACACCTACTAACAATCAAGAAATGTTTAATAACTATACAGCGGTATGGTTGAGCGATAAAA TAGAACTTTTTAATTCTAAATTAGTGCTGACTCCAGGGCTTAGATACACTTTCTTAAATTACAATAATAGAGAGCCAGAA AAGGACGATTTTTCTGTATGGAAGACTACAAAACAGCGTCAAAATGAATGGAGCCCGGCCTTTAGTATTGGCTATAAACC TGTGGAAAATTGGATATGGTATGCAAATTATCGCCGTAGTTTTATCCCCCCACAACATAAAATGGTAGGCATTTTTAGGA CTAATTACAATCAAATTTTTAATGAAATTGAAGTGGGGCAACGCTATAGTTATAAAAATCTATTGAGCTTTAACACCAAT TATTTTGTGATTTTTGCTAATCGTTATTATGCGGGAGGCTATAGCCCACAGCCTATTAATGCTAGGAGTCAAGGGGTGGA ATTAGAATTGTATTACGCACCGATTAGGGGTTTGCAATTTCATGTAGCTTACACTTATATTGATGCGCGCATCACTTCTA ACGCTGATGATATTACTTATTATTTTACAGGCATTGTCAATAAACCCTTTGACATTAAAGGGAAGCGTTTGCCTTATGTG AGCCCTAACCAATTTATATTTGACATGATGTATACTTACAAGTACACGACTTTTGGCATTAGTAGCTATTTTTATAGTCG TGCTTATAGTTCTATGCTTAATCAAGCTAAAAGCCAAACCGTGTGCCTGCCCTTAAACCCAAAATATACAGGGGGGTTGG AGTATGGTTGTAATTCAGTGGGGTTATTGCCTTGGTATTTTGTGTTGAATGTTCAAGTAAGCTCAGTTTTATGGCAAAGC GGTAGGCATAAAATCACAGGGAGTTTGCAAATCAATAACCTTTTTAACATGAAGTATTATTTTAGGGGAATTGGCACAAG CCCTACAGGAAGAGAGCCTGCACCAGGGAGATCTGTTACAGCGTATTTGAATTATGAATTTTAA
Upstream 100 bases:
>100_bases TTAAATGGCAATGATTTCAAAAATTTAAGCTGAATATAATAATAGTTATTATAAGCTTTACCTTGTTTTAAAGAGTAACA TTTTTTATAAAGGTTAGCAA
Downstream 100 bases:
>100_bases ATCCCTTTCAAGCCATTTTTTGGCTTGAATGTTTTTAACGCTACACCATTTTAAAACTCGCTACTAAATTTTCGGTCAAT AAATTAAACCCATCTACTAA
Product: iron(III) dicitrate transport protein
Products: NA
Alternate protein names: Iron(III) dicitrate transport protein fecA [H]
Number of amino acids: Translated: 767; Mature: 767
Protein sequence:
>767_residues MKRILVSLAVLSHGVHAVETHNLERVEASGRANNEEAPLSWRSKEVRNYMGSRTVISNKQLTEGANQSIEEALQNVPGVH IRNATGIGAVPSFSVRGFGGGSSGHSNTGMILVNGIPVYVAPYVDIGMPIFPVTFQSVDRISVTKGGESVRYGPNVFGGV INVITKGIPTKWDSQASERATFWGKSENGGFFNQNSKNLDKSLANNMLFDTYLKTGGMMNKHFGIQAQANWIKGQGFRYN SPTNIQNYILDSLYQINDSNKITAFFQYYNYFMADPGSLGIAAYNQNRFQNNRPNNNKSGRAKRWGAVYQNFFGDTDKIG GDFTFSYYGHDMSRDFQFDSNFLNVNTNPKLGPVYTDQNYPGFFIFDHLRRYIMNAFEPNLNLVVNTNKVKQTFNVGMRF MTMDMYFRLDQSTCEKANIIDGVCHMPPFVLSKTPTNNQEMFNNYTAVWLSDKIELFNSKLVLTPGLRYTFLNYNNREPE KDDFSVWKTTKQRQNEWSPAFSIGYKPVENWIWYANYRRSFIPPQHKMVGIFRTNYNQIFNEIEVGQRYSYKNLLSFNTN YFVIFANRYYAGGYSPQPINARSQGVELELYYAPIRGLQFHVAYTYIDARITSNADDITYYFTGIVNKPFDIKGKRLPYV SPNQFIFDMMYTYKYTTFGISSYFYSRAYSSMLNQAKSQTVCLPLNPKYTGGLEYGCNSVGLLPWYFVLNVQVSSVLWQS GRHKITGSLQINNLFNMKYYFRGIGTSPTGREPAPGRSVTAYLNYEF
Sequences:
>Translated_767_residues MKRILVSLAVLSHGVHAVETHNLERVEASGRANNEEAPLSWRSKEVRNYMGSRTVISNKQLTEGANQSIEEALQNVPGVH IRNATGIGAVPSFSVRGFGGGSSGHSNTGMILVNGIPVYVAPYVDIGMPIFPVTFQSVDRISVTKGGESVRYGPNVFGGV INVITKGIPTKWDSQASERATFWGKSENGGFFNQNSKNLDKSLANNMLFDTYLKTGGMMNKHFGIQAQANWIKGQGFRYN SPTNIQNYILDSLYQINDSNKITAFFQYYNYFMADPGSLGIAAYNQNRFQNNRPNNNKSGRAKRWGAVYQNFFGDTDKIG GDFTFSYYGHDMSRDFQFDSNFLNVNTNPKLGPVYTDQNYPGFFIFDHLRRYIMNAFEPNLNLVVNTNKVKQTFNVGMRF MTMDMYFRLDQSTCEKANIIDGVCHMPPFVLSKTPTNNQEMFNNYTAVWLSDKIELFNSKLVLTPGLRYTFLNYNNREPE KDDFSVWKTTKQRQNEWSPAFSIGYKPVENWIWYANYRRSFIPPQHKMVGIFRTNYNQIFNEIEVGQRYSYKNLLSFNTN YFVIFANRYYAGGYSPQPINARSQGVELELYYAPIRGLQFHVAYTYIDARITSNADDITYYFTGIVNKPFDIKGKRLPYV SPNQFIFDMMYTYKYTTFGISSYFYSRAYSSMLNQAKSQTVCLPLNPKYTGGLEYGCNSVGLLPWYFVLNVQVSSVLWQS GRHKITGSLQINNLFNMKYYFRGIGTSPTGREPAPGRSVTAYLNYEF >Mature_767_residues MKRILVSLAVLSHGVHAVETHNLERVEASGRANNEEAPLSWRSKEVRNYMGSRTVISNKQLTEGANQSIEEALQNVPGVH IRNATGIGAVPSFSVRGFGGGSSGHSNTGMILVNGIPVYVAPYVDIGMPIFPVTFQSVDRISVTKGGESVRYGPNVFGGV INVITKGIPTKWDSQASERATFWGKSENGGFFNQNSKNLDKSLANNMLFDTYLKTGGMMNKHFGIQAQANWIKGQGFRYN SPTNIQNYILDSLYQINDSNKITAFFQYYNYFMADPGSLGIAAYNQNRFQNNRPNNNKSGRAKRWGAVYQNFFGDTDKIG GDFTFSYYGHDMSRDFQFDSNFLNVNTNPKLGPVYTDQNYPGFFIFDHLRRYIMNAFEPNLNLVVNTNKVKQTFNVGMRF MTMDMYFRLDQSTCEKANIIDGVCHMPPFVLSKTPTNNQEMFNNYTAVWLSDKIELFNSKLVLTPGLRYTFLNYNNREPE KDDFSVWKTTKQRQNEWSPAFSIGYKPVENWIWYANYRRSFIPPQHKMVGIFRTNYNQIFNEIEVGQRYSYKNLLSFNTN YFVIFANRYYAGGYSPQPINARSQGVELELYYAPIRGLQFHVAYTYIDARITSNADDITYYFTGIVNKPFDIKGKRLPYV SPNQFIFDMMYTYKYTTFGISSYFYSRAYSSMLNQAKSQTVCLPLNPKYTGGLEYGCNSVGLLPWYFVLNVQVSSVLWQS GRHKITGSLQINNLFNMKYYFRGIGTSPTGREPAPGRSVTAYLNYEF
Specific function: FecA is the outer membrane receptor protein in the Fe(3+) dicitrate transport system [H]
COG id: COG4772
COG function: function code P; Outer membrane receptor for Fe3+-dicitrate
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1790743, Length=719, Percent_Identity=22.9485396383866, Blast_Score=136, Evalue=5e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR011662 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 87632; Mature: 87632
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRILVSLAVLSHGVHAVETHNLERVEASGRANNEEAPLSWRSKEVRNYMGSRTVISNKQ CHHHHHHHHHHHCCCEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCH LTEGANQSIEEALQNVPGVHIRNATGIGAVPSFSVRGFGGGSSGHSNTGMILVNGIPVYV HCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCEEE APYVDIGMPIFPVTFQSVDRISVTKGGESVRYGPNVFGGVINVITKGIPTKWDSQASERA ECEECCCCCEEEEECCCCCEEEEECCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCC TFWGKSENGGFFNQNSKNLDKSLANNMLFDTYLKTGGMMNKHFGIQAQANWIKGQGFRYN EECCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCCCCCEEECCEECCCCEECC SPTNIQNYILDSLYQINDSNKITAFFQYYNYFMADPGSLGIAAYNQNRFQNNRPNNNKSG CCCCHHHHHHHHHHEECCCCCEEEEEEEHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCC RAKRWGAVYQNFFGDTDKIGGDFTFSYYGHDMSRDFQFDSNFLNVNTNPKLGPVYTDQNY CHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEECCCEEEECCCCCCCCEEECCCC PGFFIFDHLRRYIMNAFEPNLNLVVNTNKVKQTFNVGMRFMTMDMYFRLDQSTCEKANII CCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHCCEEEEEEEEEEEECHHHCCHHHHH DGVCHMPPFVLSKTPTNNQEMFNNYTAVWLSDKIELFNSKLVLTPGLRYTFLNYNNREPE CCHHCCCCEEEECCCCCCHHHHCCEEEEEEECEEEHHCCEEEECCCCEEEEEECCCCCCC KDDFSVWKTTKQRQNEWSPAFSIGYKPVENWIWYANYRRSFIPPQHKMVGIFRTNYNQIF CCCHHHHHHHHHHCCCCCCEEECCCEECCCEEEEECCCCCCCCCCCEEEEEEECCHHHHH NEIEVGQRYSYKNLLSFNTNYFVIFANRYYAGGYSPQPINARSQGVELELYYAPIRGLQF HHHHHCCCCCCHHHEEECCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCEEE HVAYTYIDARITSNADDITYYFTGIVNKPFDIKGKRLPYVSPNQFIFDMMYTYKYTTFGI EEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEECH SSYFYSRAYSSMLNQAKSQTVCLPLNPKYTGGLEYGCNSVGLLPWYFVLNVQVSSVLWQS HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHC GRHKITGSLQINNLFNMKYYFRGIGTSPTGREPAPGRSVTAYLNYEF CCEEEEEEEEECCEECEEEEEEECCCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MKRILVSLAVLSHGVHAVETHNLERVEASGRANNEEAPLSWRSKEVRNYMGSRTVISNKQ CHHHHHHHHHHHCCCEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCH LTEGANQSIEEALQNVPGVHIRNATGIGAVPSFSVRGFGGGSSGHSNTGMILVNGIPVYV HCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCEEE APYVDIGMPIFPVTFQSVDRISVTKGGESVRYGPNVFGGVINVITKGIPTKWDSQASERA ECEECCCCCEEEEECCCCCEEEEECCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCC TFWGKSENGGFFNQNSKNLDKSLANNMLFDTYLKTGGMMNKHFGIQAQANWIKGQGFRYN EECCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCCCCCEEECCEECCCCEECC SPTNIQNYILDSLYQINDSNKITAFFQYYNYFMADPGSLGIAAYNQNRFQNNRPNNNKSG CCCCHHHHHHHHHHEECCCCCEEEEEEEHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCC RAKRWGAVYQNFFGDTDKIGGDFTFSYYGHDMSRDFQFDSNFLNVNTNPKLGPVYTDQNY CHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEECCCEEEECCCCCCCCEEECCCC PGFFIFDHLRRYIMNAFEPNLNLVVNTNKVKQTFNVGMRFMTMDMYFRLDQSTCEKANII CCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHCCEEEEEEEEEEEECHHHCCHHHHH DGVCHMPPFVLSKTPTNNQEMFNNYTAVWLSDKIELFNSKLVLTPGLRYTFLNYNNREPE CCHHCCCCEEEECCCCCCHHHHCCEEEEEEECEEEHHCCEEEECCCCEEEEEECCCCCCC KDDFSVWKTTKQRQNEWSPAFSIGYKPVENWIWYANYRRSFIPPQHKMVGIFRTNYNQIF CCCHHHHHHHHHHCCCCCCEEECCCEECCCEEEEECCCCCCCCCCCEEEEEEECCHHHHH NEIEVGQRYSYKNLLSFNTNYFVIFANRYYAGGYSPQPINARSQGVELELYYAPIRGLQF HHHHHCCCCCCHHHEEECCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCEEE HVAYTYIDARITSNADDITYYFTGIVNKPFDIKGKRLPYVSPNQFIFDMMYTYKYTTFGI EEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEECH SSYFYSRAYSSMLNQAKSQTVCLPLNPKYTGGLEYGCNSVGLLPWYFVLNVQVSSVLWQS HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHC GRHKITGSLQINNLFNMKYYFRGIGTSPTGREPAPGRSVTAYLNYEF CCEEEEEEEEECCEECEEEEEEECCCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2836368; 7610040; 9278503; 2254251; 2651410 [H]