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The map label for this gene is omp8

Identifier: 109947381

GI number: 109947381

Start: 716271

End: 717008

Strand: Reverse

Name: omp8

Synonym: Hac_0826

Alternate gene names: NA

Gene position: 717008-716271 (Counterclockwise)

Preceding gene: 109947386

Following gene: 109947371

Centisome position: 46.14

GC content: 42.28

Gene sequence:

>738_bases
ATGAATCTCAAAATTTCATGCCAAACGGCCCTTTTTTTAAGCTCTTTGGGTGCTGAATCAAGCGGGTTTTTTCTCAATGG
CGCTTATGAAATAGGGCAAGCTTATTACAATAACGAACTTGCCACAAACAAAAAAACAGAATTCAAAAGCCATAACGAAC
AAAGCACTCAAGGCTTTGGCGTGGGGTTAGGCTATAACCAGCTTTTTGGCAAAAAAGGCTGGGCGGGCTTGCGCTATTAT
GGGTTTTATGATTGGGCGGAGGTGAAATTTGGCACGCAATATTTTGCACCAGGGAGTTATTTGCAAGCTAAAGGTGGGCT
CAATTCTAATATGAATATCAACACTTATGGCGCGGGGGTTGATTTATTATTGAATTTTGTCAATTTGGAAAGATTTAGCA
TGGGGTTTTATGGTGGCATGGCTGTGGGGGGGACGACATGGAGCCCGCAAGCTAGAAATAGGACTATAACATGGAATACC
ACTTTAAACGGACAACAGGCAGAGCGGCTGCTAGCTGGGGATTATGGTGTGAGTATTGTGTTTAAAAGCACCGTGTTCCA
GTGGTCCTTTAATTTTGGCGTGCGTTCAGTGATTGCCAAGCATACCGGCTTAGAGCTAGGCTTTAGAATCCCTATGGTTG
CAACCCCCTACCTTACAATGATCAATGGCGATAGCAACTATAAAGAAACCTTTAAACGCCTTTATTCTTTTAATGTGTCG
TATTATTTGATATTTTGA

Upstream 100 bases:

>100_bases
CTTTTTAAAATATCCGTCCCCCCTTTGAAAAATTGGATATACTAATACTTTATTAAATATTGAGTAGCAAAAATTTATAT
CAATGCTTTTAAGGATAAAG

Downstream 100 bases:

>100_bases
GTTTTATAAAGGGGCTTTTTTAATCAATTTGCATCATTAGTTAATTTTCAAGTATTTTTTCTAAAATCTTTAACACATCA
TTGTGGTGTGCTTGACTTAA

Product: outer membrane protein 8

Products: NA

Alternate protein names: Outer Membrane Protein HopQ; Outer Membrane Protein HopZ; Outer Membrane Protein(Omp4) HopW Protein SabB; Outer Membrane Protein/Porin; Outer Membrane Protein HopW Protein (; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HorJ; Outer Membrane Protein HorA; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein HopD; Outer Membrane Function; Outer Membrane Protein HorK; Adhesin; Outer Membrane Protein HorF; Outer Membrane Protein HopE; Outer Membrane Protein HorL; Outer Membrane Protein HopL; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HorB; Outer Membrane Protein HopF; Outer Membrane Protein HopG

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MNLKISCQTALFLSSLGAESSGFFLNGAYEIGQAYYNNELATNKKTEFKSHNEQSTQGFGVGLGYNQLFGKKGWAGLRYY
GFYDWAEVKFGTQYFAPGSYLQAKGGLNSNMNINTYGAGVDLLLNFVNLERFSMGFYGGMAVGGTTWSPQARNRTITWNT
TLNGQQAERLLAGDYGVSIVFKSTVFQWSFNFGVRSVIAKHTGLELGFRIPMVATPYLTMINGDSNYKETFKRLYSFNVS
YYLIF

Sequences:

>Translated_245_residues
MNLKISCQTALFLSSLGAESSGFFLNGAYEIGQAYYNNELATNKKTEFKSHNEQSTQGFGVGLGYNQLFGKKGWAGLRYY
GFYDWAEVKFGTQYFAPGSYLQAKGGLNSNMNINTYGAGVDLLLNFVNLERFSMGFYGGMAVGGTTWSPQARNRTITWNT
TLNGQQAERLLAGDYGVSIVFKSTVFQWSFNFGVRSVIAKHTGLELGFRIPMVATPYLTMINGDSNYKETFKRLYSFNVS
YYLIF
>Mature_245_residues
MNLKISCQTALFLSSLGAESSGFFLNGAYEIGQAYYNNELATNKKTEFKSHNEQSTQGFGVGLGYNQLFGKKGWAGLRYY
GFYDWAEVKFGTQYFAPGSYLQAKGGLNSNMNINTYGAGVDLLLNFVNLERFSMGFYGGMAVGGTTWSPQARNRTITWNT
TLNGQQAERLLAGDYGVSIVFKSTVFQWSFNFGVRSVIAKHTGLELGFRIPMVATPYLTMINGDSNYKETFKRLYSFNVS
YYLIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27396; Mature: 27396

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKISCQTALFLSSLGAESSGFFLNGAYEIGQAYYNNELATNKKTEFKSHNEQSTQGFG
CCEEEEHHHHHHHHHCCCCCCCEEEECHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCEE
VGLGYNQLFGKKGWAGLRYYGFYDWAEVKFGTQYFAPGSYLQAKGGLNSNMNINTYGAGV
EECCHHHHHCCCCCCCEEEEEEECEEEEEECCEEECCCCEEEECCCCCCCCEEEEECCCH
DLLLNFVNLERFSMGFYGGMAVGGTTWSPQARNRTITWNTTLNGQQAERLLAGDYGVSIV
HHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEE
FKSTVFQWSFNFGVRSVIAKHTGLELGFRIPMVATPYLTMINGDSNYKETFKRLYSFNVS
EEEEEEEEEECCCHHHHHHHHCCCEEEEECCEEECCEEEEEECCCCHHHHHHHHHHCCCE
YYLIF
EEEEC
>Mature Secondary Structure
MNLKISCQTALFLSSLGAESSGFFLNGAYEIGQAYYNNELATNKKTEFKSHNEQSTQGFG
CCEEEEHHHHHHHHHCCCCCCCEEEECHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCEE
VGLGYNQLFGKKGWAGLRYYGFYDWAEVKFGTQYFAPGSYLQAKGGLNSNMNINTYGAGV
EECCHHHHHCCCCCCCEEEEEEECEEEEEECCEEECCCCEEEECCCCCCCCEEEEECCCH
DLLLNFVNLERFSMGFYGGMAVGGTTWSPQARNRTITWNTTLNGQQAERLLAGDYGVSIV
HHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEE
FKSTVFQWSFNFGVRSVIAKHTGLELGFRIPMVATPYLTMINGDSNYKETFKRLYSFNVS
EEEEEEEEEECCCHHHHHHHHCCCEEEEECCEEECCEEEEEECCCCHHHHHHHHHHCCCE
YYLIF
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA