| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is kgtP [H]
Identifier: 109947350
GI number: 109947350
Start: 683007
End: 684275
Strand: Reverse
Name: kgtP [H]
Synonym: Hac_0789
Alternate gene names: 109947350
Gene position: 684275-683007 (Counterclockwise)
Preceding gene: 109947351
Following gene: 109947349
Centisome position: 44.04
GC content: 38.38
Gene sequence:
>1269_bases ATGAATCCTCAACAAGCCACCAAAAAACCTTTAAAATCTCTTCTAGCCGCTAGTTCAGGTAATTTAGTAGAATGGTATGA TTTTTATGCTTATGCGTTCCTTGCTCCTTATTTTGCTAAGGACTTTACCCATACTAATGACCCTACTTTAGCGCTAATCT CGGCTTTTTTGGTTTTCATGCTAGGGTTTTTCATGCGCCCTTTGGGGAGTTTGTTTTTTGGTAAATTGGGGGATAAAAAG GGGCGTAAAACCTCTATGGTGTATTCTATTATCCTTATGGCACTAGGCTCTTTTATGTTGGCATTGCTCCCCACTAAAGA AGTCGTAGGGGAATGGGCGTTCTTATTTTTATTATTAGCTAGGCTTTTACAAGGCTTTAGCGTGGGAGGTGAATATGGCG TGGTCGCCACTTACCTCTCTGAATTAGGTAAGAATGGCAAAAAAGGTTTTTATGGCTCTTTTCAATATGTAACTCTAGTT GGAGGGCAACTCTTAGCTATTTTTTCACTTTTTATTGTTGAAAACATTTATACGCATGAGCAAATCAGTGCATTTGCTTG GCGTTATTTATTCGCTTTAGGGGGTATATTAGCCTTACTCTCGCTCTTTTTAAGAAACATCATGGAAGAGACTATGGGTA GTGAAACAACTCCCCAAAAAGAAACCCAAAGGGGCAGTTTAAAGGAATTACTCAACCATAAAAAAGCCTTAATGATAGTC TTTGGGATCACTATGGGAGGGAGTTTGTGTTTTTATACTTTTACGGTGTATTTAAAAATCTTTTTAACCAATAGCTCGTC ATTTAGCCCTAAAGAAAGCAGTTTTATCATGCTTTTAGCGCTCACTTATTTTATCTTTTTACAGCCTTTATGCGGAATGC TTGCAGATAGAATCAAACGCCAAAAAATGTTGATGATTTTTGCTATCACAGGGCTTATTGTAACTCCCCTTGTCTTTTAT GGTATCAAACACGCCACTAGCGTGTATGAAGCCCTATTTTATGAAATGCTTGCATTGAGTACGATGAGCTTTTATACTTG TATTGCTGGGGTTATTAAGGCGGAATTATTCCCTGAACATGTGCGAGCGCTTGGCGTGGGTCTAGCTTATGCGATTGCGA ATGCGCTTTTTGGGGGGAGTGCTAGTTATGTAGCGTTAGAATTCAAACAACATGGTTTTGAAGTAGGGTTTGTGGGCTAT GTCATGTTTAGTCTCATTATATACATGATTATGGTAATGCTATTCCCTAAAAAAACCTATTTGGAATAA
Upstream 100 bases:
>100_bases ATAAATACCATAATCCTTTTATCTATTCGTTAAATGTTGTTGGTAGTTTTGATAACATCCTAGTAAAATGGTCTAAAAAT TTCACATTCTAAGGATAACT
Downstream 100 bases:
>100_bases ATTGGTTCTTATTTAATTTTTGCTATAATTTTTCCTTTTAAAAGGATTATTGCATGCAAAATGGGTATTATGCGGCCGCA GGAGCTATGGCTACACAATT
Product: alpha-ketoglutarate permease
Products: Proton [Cytoplasm]; 2-oxoglutarate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MNPQQATKKPLKSLLAASSGNLVEWYDFYAYAFLAPYFAKDFTHTNDPTLALISAFLVFMLGFFMRPLGSLFFGKLGDKK GRKTSMVYSIILMALGSFMLALLPTKEVVGEWAFLFLLLARLLQGFSVGGEYGVVATYLSELGKNGKKGFYGSFQYVTLV GGQLLAIFSLFIVENIYTHEQISAFAWRYLFALGGILALLSLFLRNIMEETMGSETTPQKETQRGSLKELLNHKKALMIV FGITMGGSLCFYTFTVYLKIFLTNSSSFSPKESSFIMLLALTYFIFLQPLCGMLADRIKRQKMLMIFAITGLIVTPLVFY GIKHATSVYEALFYEMLALSTMSFYTCIAGVIKAELFPEHVRALGVGLAYAIANALFGGSASYVALEFKQHGFEVGFVGY VMFSLIIYMIMVMLFPKKTYLE
Sequences:
>Translated_422_residues MNPQQATKKPLKSLLAASSGNLVEWYDFYAYAFLAPYFAKDFTHTNDPTLALISAFLVFMLGFFMRPLGSLFFGKLGDKK GRKTSMVYSIILMALGSFMLALLPTKEVVGEWAFLFLLLARLLQGFSVGGEYGVVATYLSELGKNGKKGFYGSFQYVTLV GGQLLAIFSLFIVENIYTHEQISAFAWRYLFALGGILALLSLFLRNIMEETMGSETTPQKETQRGSLKELLNHKKALMIV FGITMGGSLCFYTFTVYLKIFLTNSSSFSPKESSFIMLLALTYFIFLQPLCGMLADRIKRQKMLMIFAITGLIVTPLVFY GIKHATSVYEALFYEMLALSTMSFYTCIAGVIKAELFPEHVRALGVGLAYAIANALFGGSASYVALEFKQHGFEVGFVGY VMFSLIIYMIMVMLFPKKTYLE >Mature_422_residues MNPQQATKKPLKSLLAASSGNLVEWYDFYAYAFLAPYFAKDFTHTNDPTLALISAFLVFMLGFFMRPLGSLFFGKLGDKK GRKTSMVYSIILMALGSFMLALLPTKEVVGEWAFLFLLLARLLQGFSVGGEYGVVATYLSELGKNGKKGFYGSFQYVTLV GGQLLAIFSLFIVENIYTHEQISAFAWRYLFALGGILALLSLFLRNIMEETMGSETTPQKETQRGSLKELLNHKKALMIV FGITMGGSLCFYTFTVYLKIFLTNSSSFSPKESSFIMLLALTYFIFLQPLCGMLADRIKRQKMLMIFAITGLIVTPLVFY GIKHATSVYEALFYEMLALSTMSFYTCIAGVIKAELFPEHVRALGVGLAYAIANALFGGSASYVALEFKQHGFEVGFVGY VMFSLIIYMIMVMLFPKKTYLE
Specific function: Uptake of alpha-ketoglutarate across the boundary membrane with the concomitant import of a cation (symport system) [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1788942, Length=412, Percent_Identity=46.1165048543689, Blast_Score=352, Evalue=3e-98, Organism=Escherichia coli, GI1790550, Length=376, Percent_Identity=28.7234042553192, Blast_Score=182, Evalue=5e-47, Organism=Escherichia coli, GI1788292, Length=396, Percent_Identity=28.5353535353535, Blast_Score=154, Evalue=7e-39, Organism=Escherichia coli, GI1789941, Length=402, Percent_Identity=30.8457711442786, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI87082404, Length=438, Percent_Identity=25.1141552511416, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI87082231, Length=234, Percent_Identity=26.0683760683761, Blast_Score=69, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 47174; Mature: 47174
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPQQATKKPLKSLLAASSGNLVEWYDFYAYAFLAPYFAKDFTHTNDPTLALISAFLVFM CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LGFFMRPLGSLFFGKLGDKKGRKTSMVYSIILMALGSFMLALLPTKEVVGEWAFLFLLLA HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH RLLQGFSVGGEYGVVATYLSELGKNGKKGFYGSFQYVTLVGGQLLAIFSLFIVENIYTHE HHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QISAFAWRYLFALGGILALLSLFLRNIMEETMGSETTPQKETQRGSLKELLNHKKALMIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHCCHHHHHHE FGITMGGSLCFYTFTVYLKIFLTNSSSFSPKESSFIMLLALTYFIFLQPLCGMLADRIKR EEHHCCCHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKMLMIFAITGLIVTPLVFYGIKHATSVYEALFYEMLALSTMSFYTCIAGVIKAELFPEH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRALGVGLAYAIANALFGGSASYVALEFKQHGFEVGFVGYVMFSLIIYMIMVMLFPKKTY HHHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHC LE CC >Mature Secondary Structure MNPQQATKKPLKSLLAASSGNLVEWYDFYAYAFLAPYFAKDFTHTNDPTLALISAFLVFM CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LGFFMRPLGSLFFGKLGDKKGRKTSMVYSIILMALGSFMLALLPTKEVVGEWAFLFLLLA HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH RLLQGFSVGGEYGVVATYLSELGKNGKKGFYGSFQYVTLVGGQLLAIFSLFIVENIYTHE HHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QISAFAWRYLFALGGILALLSLFLRNIMEETMGSETTPQKETQRGSLKELLNHKKALMIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHCCHHHHHHE FGITMGGSLCFYTFTVYLKIFLTNSSSFSPKESSFIMLLALTYFIFLQPLCGMLADRIKR EEHHCCCHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKMLMIFAITGLIVTPLVFYGIKHATSVYEALFYEMLALSTMSFYTCIAGVIKAELFPEH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRALGVGLAYAIANALFGGSASYVALEFKQHGFEVGFVGYVMFSLIIYMIMVMLFPKKTY HHHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHC LE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 2-oxoglutarate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 2-oxoglutarate [Periplasm] = Proton [Cytoplasm] + 2-oxoglutarate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2118499; 9205837; 9278503; 1709493; 2190187; 2053984; 8419306 [H]