| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
Click here to switch to the map view.
The map label for this gene is 109947295
Identifier: 109947295
GI number: 109947295
Start: 634466
End: 634927
Strand: Direct
Name: 109947295
Synonym: Hac_0724
Alternate gene names: NA
Gene position: 634466-634927 (Clockwise)
Preceding gene: 109947294
Following gene: 109947296
Centisome position: 40.83
GC content: 34.85
Gene sequence:
>462_bases ATGGAACAAAATATTTTCTCCTTACTCATTCAAAAAAAGTCTTATAAAAAGCTTGAAACTCTTTTGAAACTCAAAAAGCT TAAGGTTTTTATACCTTTAAGTTTACAAGAAAATTTGCTTTTTATCTTCATAAAAGATTCTAAATTGCTTTTTGCGTTTA AAGATCTTTGGGCGTGTAAGGAATTTAATCAACGAATCGCTAAAGAAATCAGCCATTTTTTAAGCGTGCAAGGGCATGTT TGTGGGCTTGAGGGATTAGATGCGTTAGAAATTGTGGCTTATGTGCCTAAAGATTCGCTAGAAAAGGCCAATTTTTATAC ACCCATTAAAAAGCAAGCCCAATTTTATCGCCCTAGTGCTTTAGGGTTGTTCCATAACCCTATCAAAGACGCTCGTTTGC ATGAATGTTTTGAAAAAGCGCGCTCTTTGATCCACTACCAACGCAGTTTTTTTGAGGAATGA
Upstream 100 bases:
>100_bases GAGTTTTTGGGGCGGGTTTTTCATTGAATGGGGGGGCTTTATAGCCACAAGCTTGAATCGTTAGCGCCACAAGCGTTAAA AAGCATGTTAAGATAAGTTT
Downstream 100 bases:
>100_bases ATGGCTGATTTATTGTCCAGTTTAAAAAACCTTTCTAATGGCAGTGGGGTGTATCAATACTTTGATAAAAACCGCCAATT ACTCTACATCGGTAAAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MEQNIFSLLIQKKSYKKLETLLKLKKLKVFIPLSLQENLLFIFIKDSKLLFAFKDLWACKEFNQRIAKEISHFLSVQGHV CGLEGLDALEIVAYVPKDSLEKANFYTPIKKQAQFYRPSALGLFHNPIKDARLHECFEKARSLIHYQRSFFEE
Sequences:
>Translated_153_residues MEQNIFSLLIQKKSYKKLETLLKLKKLKVFIPLSLQENLLFIFIKDSKLLFAFKDLWACKEFNQRIAKEISHFLSVQGHV CGLEGLDALEIVAYVPKDSLEKANFYTPIKKQAQFYRPSALGLFHNPIKDARLHECFEKARSLIHYQRSFFEE >Mature_153_residues MEQNIFSLLIQKKSYKKLETLLKLKKLKVFIPLSLQENLLFIFIKDSKLLFAFKDLWACKEFNQRIAKEISHFLSVQGHV CGLEGLDALEIVAYVPKDSLEKANFYTPIKKQAQFYRPSALGLFHNPIKDARLHECFEKARSLIHYQRSFFEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17984; Mature: 17984
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQNIFSLLIQKKSYKKLETLLKLKKLKVFIPLSLQENLLFIFIKDSKLLFAFKDLWACK CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEECCCHHHHHHHHHHHH EFNQRIAKEISHFLSVQGHVCGLEGLDALEIVAYVPKDSLEKANFYTPIKKQAQFYRPSA HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCHHCCCCCCCCHHHHHHHCCCCH LGLFHNPIKDARLHECFEKARSLIHYQRSFFEE HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEQNIFSLLIQKKSYKKLETLLKLKKLKVFIPLSLQENLLFIFIKDSKLLFAFKDLWACK CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEECCCHHHHHHHHHHHH EFNQRIAKEISHFLSVQGHVCGLEGLDALEIVAYVPKDSLEKANFYTPIKKQAQFYRPSA HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCHHCCCCCCCCHHHHHHHCCCCH LGLFHNPIKDARLHECFEKARSLIHYQRSFFEE HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA