Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

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The map label for this gene is fragment 1

Identifier: 109947199

GI number: 109947199

Start: 542287

End: 542610

Strand: Reverse

Name: fragment 1

Synonym: Hac_0618

Alternate gene names: NA

Gene position: 542610-542287 (Counterclockwise)

Preceding gene: 109947210

Following gene: 109947198

Centisome position: 34.92

GC content: 40.43

Gene sequence:

>324_bases
ATGGCTCAATTAGAAGATTTGAAAGTGCATGAAAAATACAATTTGTTGTTATGCATGGTTTCAGGTGCATACAAAGGGAC
AATTCCAGGAAATAAGAATTTTAAAGAGTGGTGTGATGAATGCACTTTGACCGGTTTTCGCCCAAGAAGGGGAGAAGTGG
CTCAATATGAGCATTTTGAACTCATGCGTAAGGCAGATTATGTTATTGGCATTGTGAATGAGGATTCAACCACTAGAGGG
GCTGAAGTCCAACGGAGCGTTTTTGCCCTAAAAATTGACCATGACACTATTGGAACTGATGAAGAAAGGGGCGTTAATGG
TTGA

Upstream 100 bases:

>100_bases
CACTCTCTTTTTAACCAACACAATCTTTTTAGAAAATTTAATTCAATAAGCCCCATTTTTATCAGTGGGACTTACAGAGT
TAAATCACAAGGAGAAAACG

Downstream 100 bases:

>100_bases
GGGCGTTTGCGCTCAAAAAGGGAGTCAAGAATACGAAGAATTAGTCAATAAAAGCACATGGCATTTTACGCACAGCACCA
GACTTGGAAAACCAAAATCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MAQLEDLKVHEKYNLLLCMVSGAYKGTIPGNKNFKEWCDECTLTGFRPRRGEVAQYEHFELMRKADYVIGIVNEDSTTRG
AEVQRSVFALKIDHDTIGTDEERGVNG

Sequences:

>Translated_107_residues
MAQLEDLKVHEKYNLLLCMVSGAYKGTIPGNKNFKEWCDECTLTGFRPRRGEVAQYEHFELMRKADYVIGIVNEDSTTRG
AEVQRSVFALKIDHDTIGTDEERGVNG
>Mature_106_residues
AQLEDLKVHEKYNLLLCMVSGAYKGTIPGNKNFKEWCDECTLTGFRPRRGEVAQYEHFELMRKADYVIGIVNEDSTTRGA
EVQRSVFALKIDHDTIGTDEERGVNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12156; Mature: 12025

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQLEDLKVHEKYNLLLCMVSGAYKGTIPGNKNFKEWCDECTLTGFRPRRGEVAQYEHFE
CCCCCCCEECCCCEEEEEEECCCEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHH
LMRKADYVIGIVNEDSTTRGAEVQRSVFALKIDHDTIGTDEERGVNG
HHHHCCEEEEEECCCCCCCCCCEECEEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
AQLEDLKVHEKYNLLLCMVSGAYKGTIPGNKNFKEWCDECTLTGFRPRRGEVAQYEHFE
CCCCCCEECCCCEEEEEEECCCEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHH
LMRKADYVIGIVNEDSTTRGAEVQRSVFALKIDHDTIGTDEERGVNG
HHHHCCEEEEEECCCCCCCCCCEECEEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA