| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109947058
Identifier: 109947058
GI number: 109947058
Start: 403688
End: 404200
Strand: Reverse
Name: 109947058
Synonym: Hac_0456
Alternate gene names: NA
Gene position: 404200-403688 (Counterclockwise)
Preceding gene: 109947059
Following gene: 109947057
Centisome position: 26.01
GC content: 33.72
Gene sequence:
>513_bases ATGAGATTTAAGAGTGTTGTTGCTTTTATCTCTTTAGCTGCCGCTCTTGGCGTTTTAGCCTATTTGTTTTTGAGCGTTAA AAAAGAAATCCCCACCGTCTCTTTTATAAACAAAAACCCATCTCAAACAGAAAAAAGCCATGACATTAACCTAGAAGAAA CCCCTAATAACCCTAATGAAAGTGCTAATAACCCCCATAACGAAGAAACCCATAACAACACCCTTTCTCAAAACCTTGAT GCACAAGATTCCATCAATTACCCTGTCATAGAACATCATTTTGAAGTCCCTTTTGAAGAGGGAAAAAGGGAATATTCAAA GCTTATCATTAAGGATTTAAAGGATTATCAATTCTTGTGCTTGAAAGAAATCCTCAAAAAAGAACAAATTGATTACGCTT ATGATAACACCAACAACCAATCTAATCTCATCGTCTATTTAGATGAAAATAAAAAAGAACGCTTTTTAGCTGATTTAGAC TACTATAAAATACGCTATCATGCTGTTTTTTAA
Upstream 100 bases:
>100_bases GAAGAATTGCAAGCCTTTAACACGAACAATGATAAAATGACTTTAGGGGATATTCTTAAAGAAAAACTCTAGAGACTTGA TTTAAAAACATGGGAATGGC
Downstream 100 bases:
>100_bases ATTCAAAGGATAAAAATGTATCAAGTAGCCATTTGCGACCCCATCCATGCCAAAGGCATTCAAATTTTAGAAGCTCAAAA AGATATTGTTTTGCATGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MRFKSVVAFISLAAALGVLAYLFLSVKKEIPTVSFINKNPSQTEKSHDINLEETPNNPNESANNPHNEETHNNTLSQNLD AQDSINYPVIEHHFEVPFEEGKREYSKLIIKDLKDYQFLCLKEILKKEQIDYAYDNTNNQSNLIVYLDENKKERFLADLD YYKIRYHAVF
Sequences:
>Translated_170_residues MRFKSVVAFISLAAALGVLAYLFLSVKKEIPTVSFINKNPSQTEKSHDINLEETPNNPNESANNPHNEETHNNTLSQNLD AQDSINYPVIEHHFEVPFEEGKREYSKLIIKDLKDYQFLCLKEILKKEQIDYAYDNTNNQSNLIVYLDENKKERFLADLD YYKIRYHAVF >Mature_170_residues MRFKSVVAFISLAAALGVLAYLFLSVKKEIPTVSFINKNPSQTEKSHDINLEETPNNPNESANNPHNEETHNNTLSQNLD AQDSINYPVIEHHFEVPFEEGKREYSKLIIKDLKDYQFLCLKEILKKEQIDYAYDNTNNQSNLIVYLDENKKERFLADLD YYKIRYHAVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19861; Mature: 19861
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFKSVVAFISLAAALGVLAYLFLSVKKEIPTVSFINKNPSQTEKSHDINLEETPNNPNE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC SANNPHNEETHNNTLSQNLDAQDSINYPVIEHHFEVPFEEGKREYSKLIIKDLKDYQFLC CCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH LKEILKKEQIDYAYDNTNNQSNLIVYLDENKKERFLADLDYYKIRYHAVF HHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHCCCEEEEEEEEEC >Mature Secondary Structure MRFKSVVAFISLAAALGVLAYLFLSVKKEIPTVSFINKNPSQTEKSHDINLEETPNNPNE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC SANNPHNEETHNNTLSQNLDAQDSINYPVIEHHFEVPFEEGKREYSKLIIKDLKDYQFLC CCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH LKEILKKEQIDYAYDNTNNQSNLIVYLDENKKERFLADLDYYKIRYHAVF HHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA