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The map label for this gene is yigC [C]

Identifier: 109947056

GI number: 109947056

Start: 400245

End: 402095

Strand: Reverse

Name: yigC [C]

Synonym: Hac_0454

Alternate gene names: 109947056

Gene position: 402095-400245 (Counterclockwise)

Preceding gene: 109947057

Following gene: 109947055

Centisome position: 25.88

GC content: 38.68

Gene sequence:

>1851_bases
ATGCGAGATTTTGTAAAGCTTTTAAAAGAGCATAATGAATTAGAAATCATTGACGCTCCCCTTGAAGTGGATTTAGAAAT
CGCTCATTTGGCTTATATAGAAGCGAAAAAACCTAATGGAGGCAAAGCTCTCTTATTCACGCACCCCATAAGAAAAGAGC
GTAATCAAATCAAAACCTTTGACATGCCTATTTTAATGAACGCTTTTGGCTCATTCAAACGCTTAGAGCTTTTATTAAAA
ACCCCCATAGAGGATTTGCAACAACGCATGCAAGCTTTCTTGCACTTTAGTGCTCCTAAAAATTTCGCTGAAAGTTTGAA
AGTCTTAAAGGATTTATGGGCTTTAAGACACATTTTCCCTAAAAAAACCGCTCGCCCTAAAAACCTCATCACCAAACAAA
ACGAAGAGGTTAATCTATGGGATCTACCTGTTTTAAAAACTTGGGAAAAAGATGGTGGGGCTTTCATCACTATGGGGCAA
GTCTATACCCAAAGCCTAGATAATAAAAAAAAGAATTTAGGCATGTATCGTTTGCAAGTTTATGATAAAAACCATTTAGG
CTTGCATTGGCAAATCCATAAAGACTCCCAACTCTTTTTCCACGAATACGCTAAAGCTAAAGTCAAAATGCCTGTAAGCA
TTGCGATTGGTGGGGATTTGCTCTATACATGGTGTGCTACTGCCCCCCTACCTTATGGTATTTATGAGCTCATGCTCTAT
GGGTTTATTAGAGAGAAAAAAGCACAAGTGATGCCATGTTTGAGTAATCCTTTAAGCGTGCCAAAAGATTGCGACATTGT
GATAGAGGGGTTTGTGGATTGCGAAAAGCTAGAGCTTGAAGGGCCTTTTGGGGATCACACTGGCTATTATACCCCCATTG
AGCCTTACCCTATTTTAGAAGTCAAAACCATTAGTTGCAAAAAAGATTCCATTTATTTAGCCACCGTAGTGGGTAAGCCC
CCTTTAGAAGACAAATACATGGGGTATTTGACTGAACGCTTATTCTTGCCTTTGCTAAAAACCAACGCCCCCAATCTTAT
AGACTATTACATGCCAGAAAATGGGGTGTTTCATAATTTGATTTTAGCTCAAATACACACGCACTACAACGCCCATGCCA
AACAAGTCATGCATGCTTTTTGGGGGGTGGGGCAAATGAGTTTTGTCAAACATGCGATTTTTGTCAATGAAGACGCTCCC
AATTTAAGAGACACCAACGCTATCATTGAGTATGTATTAGAAAATTTTTCTAAAGAAAACGCGCTCATCTCTCAAGGCGT
GTGTGATGCATTAGATCATGCAAGCCCTGAATACGCTATGGGGGGGAAACTTGGTATTGATGCGACCTCTAAAAGCAATA
CCCCCTACCCCACGCTTTTAGATGACAATGCCCTATTGGCACTTTTACAAGATAAAATGCCAAATATCATTCTTTTGAAA
CAATACTATCCGCACACTCGTAACCCTATTTGTGTGATTAGCGTGGAAAAGAAAGATAAAAGCATCATTGAATTGGCTAA
AAACTTGTTAGGTTTTGAAGAATATTTACGCATTGTGGTGTTTGTAGAGCATACAAGCAACGATTTGAATAACCCCTACA
TGTTATTGTGGCGCGTTGTTAATAATATTGACGCGCAGCACGATATTCTCACCTCTAAACATTGCTTTTTTATAGACGCT
ACCAATAAGGGCATTATGGACAAACATTTTAGAGAATGGCCCACAGAAACGAATTGCTCTATGGAAGTCATAGAGAATCT
AAAAAAGAAAGGGTTTTTAAAGGATTTTGAAAAGTTGAATCAAAAATTCCATCTCACGCATTCTTTTAGCACCCATAAAG
AAGAACTATAA

Upstream 100 bases:

>100_bases
TAGCGCTCATTATTGTAGATGAAGAGGTTTCTTTGGAAGTTTTAGAAGAGCTTAAAAACATTCCTGCGTGTTTAAGCGTT
CATTATGTGGTTATTTAAGC

Downstream 100 bases:

>100_bases
AGAAGATCTATGATAGATTATCGCCAAAAAATTGATTTTCTCATTGCAAAAATAGAAAAAGCACGCATCGCCTATTCAAG
ACACCATATTGTAAAAATCG

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 616; Mature: 616

Protein sequence:

>616_residues
MRDFVKLLKEHNELEIIDAPLEVDLEIAHLAYIEAKKPNGGKALLFTHPIRKERNQIKTFDMPILMNAFGSFKRLELLLK
TPIEDLQQRMQAFLHFSAPKNFAESLKVLKDLWALRHIFPKKTARPKNLITKQNEEVNLWDLPVLKTWEKDGGAFITMGQ
VYTQSLDNKKKNLGMYRLQVYDKNHLGLHWQIHKDSQLFFHEYAKAKVKMPVSIAIGGDLLYTWCATAPLPYGIYELMLY
GFIREKKAQVMPCLSNPLSVPKDCDIVIEGFVDCEKLELEGPFGDHTGYYTPIEPYPILEVKTISCKKDSIYLATVVGKP
PLEDKYMGYLTERLFLPLLKTNAPNLIDYYMPENGVFHNLILAQIHTHYNAHAKQVMHAFWGVGQMSFVKHAIFVNEDAP
NLRDTNAIIEYVLENFSKENALISQGVCDALDHASPEYAMGGKLGIDATSKSNTPYPTLLDDNALLALLQDKMPNIILLK
QYYPHTRNPICVISVEKKDKSIIELAKNLLGFEEYLRIVVFVEHTSNDLNNPYMLLWRVVNNIDAQHDILTSKHCFFIDA
TNKGIMDKHFREWPTETNCSMEVIENLKKKGFLKDFEKLNQKFHLTHSFSTHKEEL

Sequences:

>Translated_616_residues
MRDFVKLLKEHNELEIIDAPLEVDLEIAHLAYIEAKKPNGGKALLFTHPIRKERNQIKTFDMPILMNAFGSFKRLELLLK
TPIEDLQQRMQAFLHFSAPKNFAESLKVLKDLWALRHIFPKKTARPKNLITKQNEEVNLWDLPVLKTWEKDGGAFITMGQ
VYTQSLDNKKKNLGMYRLQVYDKNHLGLHWQIHKDSQLFFHEYAKAKVKMPVSIAIGGDLLYTWCATAPLPYGIYELMLY
GFIREKKAQVMPCLSNPLSVPKDCDIVIEGFVDCEKLELEGPFGDHTGYYTPIEPYPILEVKTISCKKDSIYLATVVGKP
PLEDKYMGYLTERLFLPLLKTNAPNLIDYYMPENGVFHNLILAQIHTHYNAHAKQVMHAFWGVGQMSFVKHAIFVNEDAP
NLRDTNAIIEYVLENFSKENALISQGVCDALDHASPEYAMGGKLGIDATSKSNTPYPTLLDDNALLALLQDKMPNIILLK
QYYPHTRNPICVISVEKKDKSIIELAKNLLGFEEYLRIVVFVEHTSNDLNNPYMLLWRVVNNIDAQHDILTSKHCFFIDA
TNKGIMDKHFREWPTETNCSMEVIENLKKKGFLKDFEKLNQKFHLTHSFSTHKEEL
>Mature_616_residues
MRDFVKLLKEHNELEIIDAPLEVDLEIAHLAYIEAKKPNGGKALLFTHPIRKERNQIKTFDMPILMNAFGSFKRLELLLK
TPIEDLQQRMQAFLHFSAPKNFAESLKVLKDLWALRHIFPKKTARPKNLITKQNEEVNLWDLPVLKTWEKDGGAFITMGQ
VYTQSLDNKKKNLGMYRLQVYDKNHLGLHWQIHKDSQLFFHEYAKAKVKMPVSIAIGGDLLYTWCATAPLPYGIYELMLY
GFIREKKAQVMPCLSNPLSVPKDCDIVIEGFVDCEKLELEGPFGDHTGYYTPIEPYPILEVKTISCKKDSIYLATVVGKP
PLEDKYMGYLTERLFLPLLKTNAPNLIDYYMPENGVFHNLILAQIHTHYNAHAKQVMHAFWGVGQMSFVKHAIFVNEDAP
NLRDTNAIIEYVLENFSKENALISQGVCDALDHASPEYAMGGKLGIDATSKSNTPYPTLLDDNALLALLQDKMPNIILLK
QYYPHTRNPICVISVEKKDKSIIELAKNLLGFEEYLRIVVFVEHTSNDLNNPYMLLWRVVNNIDAQHDILTSKHCFFIDA
TNKGIMDKHFREWPTETNCSMEVIENLKKKGFLKDFEKLNQKFHLTHSFSTHKEEL

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=466, Percent_Identity=32.1888412017167, Blast_Score=258, Evalue=1e-69,
Organism=Saccharomyces cerevisiae, GI6320748, Length=324, Percent_Identity=24.3827160493827, Blast_Score=68, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR022390
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: NA

Molecular weight: Translated: 70928; Mature: 70928

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: PS00014 ER_TARGET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDFVKLLKEHNELEIIDAPLEVDLEIAHLAYIEAKKPNGGKALLFTHPIRKERNQIKTF
CHHHHHHHHCCCCEEEEECCCCCCEEEEEEEEEEEECCCCCEEEEEECCHHHHHHHCCCC
DMPILMNAFGSFKRLELLLKTPIEDLQQRMQAFLHFSAPKNFAESLKVLKDLWALRHIFP
CCHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHECCCCHHHHHHHHHHHHHHHHHHHCC
KKTARPKNLITKQNEEVNLWDLPVLKTWEKDGGAFITMGQVYTQSLDNKKKNLGMYRLQV
CCCCCCHHHHCCCCCCCEEEECCCEEEECCCCCEEEEEHHHHHHHHCCHHHCCCEEEEEE
YDKNHLGLHWQIHKDSQLFFHEYAKAKVKMPVSIAIGGDLLYTWCATAPLPYGIYELMLY
ECCCCCEEEEEEECCCHHHHHHHHHHEEECCEEEEECCHHHHHHHHCCCCCHHHHHHHHH
GFIREKKAQVMPCLSNPLSVPKDCDIVIEGFVDCEKLELEGPFGDHTGYYTPIEPYPILE
HHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEE
VKTISCKKDSIYLATVVGKPPLEDKYMGYLTERLFLPLLKTNAPNLIDYYMPENGVFHNL
EEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHH
ILAQIHTHYNAHAKQVMHAFWGVGQMSFVKHAIFVNEDAPNLRDTNAIIEYVLENFSKEN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCCC
ALISQGVCDALDHASPEYAMGGKLGIDATSKSNTPYPTLLDDNALLALLQDKMPNIILLK
HHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCEEECCCHHHHHHHHCCCCEEEEE
QYYPHTRNPICVISVEKKDKSIIELAKNLLGFEEYLRIVVFVEHTSNDLNNPYMLLWRVV
ECCCCCCCCEEEEEECCCCHHHHHHHHHHHCHHHHEEEEEEEEECCCCCCCHHHHHHHHH
NNIDAQHDILTSKHCFFIDATNKGIMDKHFREWPTETNCSMEVIENLKKKGFLKDFEKLN
HCCCCHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHC
QKFHLTHSFSTHKEEL
CEEEEEECCCCCCCCC
>Mature Secondary Structure
MRDFVKLLKEHNELEIIDAPLEVDLEIAHLAYIEAKKPNGGKALLFTHPIRKERNQIKTF
CHHHHHHHHCCCCEEEEECCCCCCEEEEEEEEEEEECCCCCEEEEEECCHHHHHHHCCCC
DMPILMNAFGSFKRLELLLKTPIEDLQQRMQAFLHFSAPKNFAESLKVLKDLWALRHIFP
CCHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHECCCCHHHHHHHHHHHHHHHHHHHCC
KKTARPKNLITKQNEEVNLWDLPVLKTWEKDGGAFITMGQVYTQSLDNKKKNLGMYRLQV
CCCCCCHHHHCCCCCCCEEEECCCEEEECCCCCEEEEEHHHHHHHHCCHHHCCCEEEEEE
YDKNHLGLHWQIHKDSQLFFHEYAKAKVKMPVSIAIGGDLLYTWCATAPLPYGIYELMLY
ECCCCCEEEEEEECCCHHHHHHHHHHEEECCEEEEECCHHHHHHHHCCCCCHHHHHHHHH
GFIREKKAQVMPCLSNPLSVPKDCDIVIEGFVDCEKLELEGPFGDHTGYYTPIEPYPILE
HHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEE
VKTISCKKDSIYLATVVGKPPLEDKYMGYLTERLFLPLLKTNAPNLIDYYMPENGVFHNL
EEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHH
ILAQIHTHYNAHAKQVMHAFWGVGQMSFVKHAIFVNEDAPNLRDTNAIIEYVLENFSKEN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCCC
ALISQGVCDALDHASPEYAMGGKLGIDATSKSNTPYPTLLDDNALLALLQDKMPNIILLK
HHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCEEECCCHHHHHHHHCCCCEEEEE
QYYPHTRNPICVISVEKKDKSIIELAKNLLGFEEYLRIVVFVEHTSNDLNNPYMLLWRVV
ECCCCCCCCEEEEEECCCCHHHHHHHHHHHCHHHHEEEEEEEEECCCCCCCHHHHHHHHH
NNIDAQHDILTSKHCFFIDATNKGIMDKHFREWPTETNCSMEVIENLKKKGFLKDFEKLN
HCCCCHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHC
QKFHLTHSFSTHKEEL
CEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]