Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

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The map label for this gene is 109947019

Identifier: 109947019

GI number: 109947019

Start: 359442

End: 360512

Strand: Direct

Name: 109947019

Synonym: Hac_0413

Alternate gene names: NA

Gene position: 359442-360512 (Clockwise)

Preceding gene: 109947018

Following gene: 109947020

Centisome position: 23.13

GC content: 35.39

Gene sequence:

>1071_bases
ATGGGGTGCAATAAAAAGTGGAAAAAGATTAAAATGGTTAAACGCTACCTTTTTATGGCGGTTTCGCAAGTCTTTTTTTC
TTTCTTTTTAGTACTGTTTTTTATCTCTTCTATCGTGCTATTAATTAGTATCGCAAGCGTAACACTTGTGATTAAAGTGA
GCTTTTTGGATCTAGTGCAACTTTTTTTGTATTCCTTGCCTGGAACTATCTTTTTTATTTTGCCGATCACTTTTTTTGCG
GCTTGTGCTTTGGGACTTTCAAGGCTTAGTTATGACCATGAACTATTAGTCTTTTTTTCTTTAGGGGTTTCGCCTAAAAA
AATGACTAAAGCGTTTGTGCCATTAAGTATTTTAGTGAGTGCGATTTTATTGGTGTTTTCGCTTGTTTTAATCCCCACTT
CCAAGAGCGCTTATTATGGGTTTTTGCATCAAAAAAAGGACAAGATTGACATTAATATAAGAGTGGGCGAGTTTGGGCAA
AAATTAGGCGATTGGCTCGTGTATGTGGATAAGGCTGAAAACAATTCCTATGATAATTTGGTGCTTTTTTCTAATAAAAG
TCTCTCTCAAGAAAGCTTTATTTTGGCTCAAAAAGGCAATATTAACAACCAAAATGGCGTGTTTGAATTGAATTTATACA
AAGGGCATGCGTATTTCACTCAAGGCGATAAAATGCGTAAAATTGATTTTGAGGAATTGCATTTACGCAACAAGCTCAAG
TCGTTTAACGCTAACGATGCGTCTTATTTGCAAGGCACGGATTATTTAGGTTATTGGAAAAGAGCTTTTGGTAAAAGCGC
TAATAAAAGTCAAAAACGCCGTTTTTCTCAAGCGATTTTGGTTTCATTATTCCCTTTAGCGAGCGTGTTTTTAATCCCTT
TATTTGGTATCGCCAACCCACGATTCAAAACGAATTGGAGTTATTTCTATGTCCTTGGGGCGGTTGGGATTTATTTTTTA
ATGGTGCATGTGATTTCTACCGATTTGTTTTTGATGACCTTTATCTTCCCCTTTATTTGGGCGTTTGCCTCTTATTTGTT
GTTTAGAAAATTCATTTTAAAGCGTTATTAA

Upstream 100 bases:

>100_bases
CAAGAAAATAACGAGCAAGTGATCAAACGATTCGTGAAGCAAAATAACACCTTGTGCGTCCAAAAAGTGCTAGAAAAATG
CTCATTTGTGCCTGTTGTAG

Downstream 100 bases:

>100_bases
AATGCGTTGTTTTAAGGCTACTATCGCTTATGATGGGGCGTATTTTTTAGGCTATGCCAAACAGCCTGACAAACTTGGCG
TGCAAGATAAAATTGAAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MGCNKKWKKIKMVKRYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILPITFFA
ACALGLSRLSYDHELLVFFSLGVSPKKMTKAFVPLSILVSAILLVFSLVLIPTSKSAYYGFLHQKKDKIDINIRVGEFGQ
KLGDWLVYVDKAENNSYDNLVLFSNKSLSQESFILAQKGNINNQNGVFELNLYKGHAYFTQGDKMRKIDFEELHLRNKLK
SFNANDASYLQGTDYLGYWKRAFGKSANKSQKRRFSQAILVSLFPLASVFLIPLFGIANPRFKTNWSYFYVLGAVGIYFL
MVHVISTDLFLMTFIFPFIWAFASYLLFRKFILKRY

Sequences:

>Translated_356_residues
MGCNKKWKKIKMVKRYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILPITFFA
ACALGLSRLSYDHELLVFFSLGVSPKKMTKAFVPLSILVSAILLVFSLVLIPTSKSAYYGFLHQKKDKIDINIRVGEFGQ
KLGDWLVYVDKAENNSYDNLVLFSNKSLSQESFILAQKGNINNQNGVFELNLYKGHAYFTQGDKMRKIDFEELHLRNKLK
SFNANDASYLQGTDYLGYWKRAFGKSANKSQKRRFSQAILVSLFPLASVFLIPLFGIANPRFKTNWSYFYVLGAVGIYFL
MVHVISTDLFLMTFIFPFIWAFASYLLFRKFILKRY
>Mature_355_residues
GCNKKWKKIKMVKRYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILPITFFAA
CALGLSRLSYDHELLVFFSLGVSPKKMTKAFVPLSILVSAILLVFSLVLIPTSKSAYYGFLHQKKDKIDINIRVGEFGQK
LGDWLVYVDKAENNSYDNLVLFSNKSLSQESFILAQKGNINNQNGVFELNLYKGHAYFTQGDKMRKIDFEELHLRNKLKS
FNANDASYLQGTDYLGYWKRAFGKSANKSQKRRFSQAILVSLFPLASVFLIPLFGIANPRFKTNWSYFYVLGAVGIYFLM
VHVISTDLFLMTFIFPFIWAFASYLLFRKFILKRY

Specific function: Unknown

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40987; Mature: 40856

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCNKKWKKIKMVKRYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFLYSLPGTIFFILPITFFAACALGLSRLSYDHELLVFFSLGVSPKKMTKAFVPLSILVS
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCHHHHHH
AILLVFSLVLIPTSKSAYYGFLHQKKDKIDINIRVGEFGQKLGDWLVYVDKAENNSYDNL
HHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEEECHHHHHHCCCEEEEECCCCCCCCCE
VLFSNKSLSQESFILAQKGNINNQNGVFELNLYKGHAYFTQGDKMRKIDFEELHLRNKLK
EEEECCCCCCCCEEEEECCCCCCCCCEEEEEEEECEEEEECCCCEECCCHHHHHHHHHHH
SFNANDASYLQGTDYLGYWKRAFGKSANKSQKRRFSQAILVSLFPLASVFLIPLFGIANP
CCCCCCCHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RFKTNWSYFYVLGAVGIYFLMVHVISTDLFLMTFIFPFIWAFASYLLFRKFILKRY
CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GCNKKWKKIKMVKRYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFLYSLPGTIFFILPITFFAACALGLSRLSYDHELLVFFSLGVSPKKMTKAFVPLSILVS
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCHHHHHH
AILLVFSLVLIPTSKSAYYGFLHQKKDKIDINIRVGEFGQKLGDWLVYVDKAENNSYDNL
HHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEEECHHHHHHCCCEEEEECCCCCCCCCE
VLFSNKSLSQESFILAQKGNINNQNGVFELNLYKGHAYFTQGDKMRKIDFEELHLRNKLK
EEEECCCCCCCCEEEEECCCCCCCCCEEEEEEEECEEEEECCCCEECCCHHHHHHHHHHH
SFNANDASYLQGTDYLGYWKRAFGKSANKSQKRRFSQAILVSLFPLASVFLIPLFGIANP
CCCCCCCHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RFKTNWSYFYVLGAVGIYFLMVHVISTDLFLMTFIFPFIWAFASYLLFRKFILKRY
CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA