Click here to switch to the map view.

The map label for this gene is yqhA [C]

Identifier: 109946982

GI number: 109946982

Start: 320132

End: 320401

Strand: Direct

Name: yqhA [C]

Synonym: Hac_0374

Alternate gene names: 109946982

Gene position: 320132-320401 (Clockwise)

Preceding gene: 109946981

Following gene: 109946987

Centisome position: 20.6

GC content: 37.78

Gene sequence:

>270_bases
GTGGATGCTAGTGGAATCACTTGGCTAAAGCATACGGATTTTAACGCCTTAAAATTAAAGGTTTCCCTTTCCATTGTGGC
TATTTCAGCGATTTTTTTACTCAAACGCTACATGAGTTTAGAATATGTTTTATCCGGCATCCCTAAAGATGCATTTCTAT
CGCATAACCCCATTTTTTGGCAAGTCGTGATCCATTTAGTATTTGTGTGTTCAGCGTTGTTGGCTACTGTTACGAATAAT
ATCGCTTTTTCGCAAAACAAAGGGCATTAA

Upstream 100 bases:

>100_bases
ACGGCCGTTTGAGGGATTCCATTGAATGGCTCATTAACGCCGGTGAGAGCTTGAAAAGCAAAATGCACGAATATGAAAGC
TTTTTTGAAAATTAGACAAG

Downstream 100 bases:

>100_bases
AAGGGTTTAGAGTTCTTTTTCAGGAAGGACTTTAGACCATTCTTTAATCAAGCGTAAAAAAAAGGAAGTGTCAGGCGAAT
TTTTTTCGTGGATTAAGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MDASGITWLKHTDFNALKLKVSLSIVAISAIFLLKRYMSLEYVLSGIPKDAFLSHNPIFWQVVIHLVFVCSALLATVTNN
IAFSQNKGH

Sequences:

>Translated_89_residues
MDASGITWLKHTDFNALKLKVSLSIVAISAIFLLKRYMSLEYVLSGIPKDAFLSHNPIFWQVVIHLVFVCSALLATVTNN
IAFSQNKGH
>Mature_89_residues
MDASGITWLKHTDFNALKLKVSLSIVAISAIFLLKRYMSLEYVLSGIPKDAFLSHNPIFWQVVIHLVFVCSALLATVTNN
IAFSQNKGH

Specific function: Unknown

COG id: COG2862

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0114 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005134
- InterPro:   IPR020761
- InterPro:   IPR020765 [H]

Pfam domain/function: PF03350 UPF0114 [H]

EC number: NA

Molecular weight: Translated: 9919; Mature: 9919

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDASGITWLKHTDFNALKLKVSLSIVAISAIFLLKRYMSLEYVLSGIPKDAFLSHNPIFW
CCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHH
QVVIHLVFVCSALLATVTNNIAFSQNKGH
HHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDASGITWLKHTDFNALKLKVSLSIVAISAIFLLKRYMSLEYVLSGIPKDAFLSHNPIFW
CCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHH
QVVIHLVFVCSALLATVTNNIAFSQNKGH
HHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA