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The map label for this gene is fixN [H]

Identifier: 109946937

GI number: 109946937

Start: 277745

End: 279232

Strand: Direct

Name: fixN [H]

Synonym: Hac_0325

Alternate gene names: 109946937

Gene position: 277745-279232 (Clockwise)

Preceding gene: 109946933

Following gene: 109946938

Centisome position: 17.87

GC content: 41.13

Gene sequence:

>1488_bases
ATGCAAAAAAGTGTGCCTTTAAGTTACGATTATTCCATTAGCAAGCTATTTCTTTATGCAATGATTGCATTTGGGGTAGT
GGGCATGTTAATAGGGATAGTGTTGGCCTTTGAGTTGTCTTTCCCTAGTTTGAATTATATTGCAGGGGAGTATGGGATTT
TTGGCCGCTTGCGCCCTTTACACACCAATGCAGTGATTTATGGATTCACTCTTGGAGGGATTTGGGCGAGTTGGTATTAT
ATTGGTCAAAGGGTGCTTAAAATCACCTATTACCAACACCCTTTTTTAAGGTTCGTGGGGCTGTTGCACTTTTGGCTGTG
GATACTTCTTTTAGTGCTAGCGGTCATTAGCCTGTTTGCTGGGTTGAATCAATCCAAAGAATACGCTGAATTGATGTGGC
CTTTAGACATTATTGTAGTTATCGTGTGGGTGCTATGGGGGATTAGCATGTTTGGGAGCATGAGCGTTAGGAGAGAAAAT
ACTATTTATGTATCTTTATGGTATTATATTGCTACTTATGTGGGCATAGCGGTGATGTATATCTTCAATAACCTTTCTAT
CCCCACTTATTTTATCGCTGATATGGGGAGCATTTGGCATTCTATTTCTCTGTATTCAGGCAGTAATGATGCACTCATTC
AATGGTGGTGGGGTCATAATGCGGTCGCTTTTGTTTTTACGAGCGGTTTGATTGGCACGATTTATTATTTCTTGCCTAAA
GAGAGCGGTCAGCCTATCTTTTCTTACAAGCTTACTTTGTTTTCTTTCTGGAGTTTAATGTTTGTTTATATCTGGGCAGG
TGGGCACCATTTGATTTATTCCACCGTGCCTGATTGGGTGCAAACTCTCTCTAGCGTGTTTTCAGTGGTGTTGATTTTGC
CTTCTTGGGGGACAGCTATTAACATGCTTTTAACGATGAGAGGTCAATGGCACCAACTCAAAGAAAGCCCTTTAATTAAA
TTCTTGGTTTTGGGCTCTACTTTCTACATGCTTTCTACTTTAGAGGGGGCAATTCAAGCGATTAAAAGCGTGAACGCATT
AGCGCACTTTACTGATTGGATTGTAGGGCATGTGCATGATGGCGTGCTTGGTTGGGTAGGATTTACTTTGATTGCAAGCA
TGTATCACATGACGCCTAGGCTTTTCAAAAGAGAGATCTATTCAGGGCGTCTTGTGGATTTCCAATTCTGGATCATGACT
TTAGGGATTGTGCTTTACTTTTCGTCCATGTGGATTGCAGGGATCACGCAAGGGATGATGTGGAGGGATGTGGATCAATA
TGGGAATCTCACTTATCAGTTCATTGATACGGTTAAGGTGTTGATCCCTTATTACAATATTAGGGGCGTTGGGGGTCTTA
TGTATTTTATTGGATTTATTATCTTTGCCTACAATATTTTTATGACAATCTCTGCAGGCAAAAAGTTAGAGCGCGAGCCC
AATTACGCTACGCCTATGTCTCGATCAAGGGAGGTTGAAAATGTTTAA

Upstream 100 bases:

>100_bases
TTACAGAAAAATCCTAAAATTTAAGCTTTTTGAAAAAGATAAAATCTTATAATTATATTATGTTTTGCCTTGTTAAATTG
ACTACAAATAGGAGTATTGC

Downstream 100 bases:

>100_bases
CTTTTTGGAAAAAAATCCGTTCTTTTTCACTCTTGCGTTCATTTTTGTGTTTGCGATTGCAGGCTTGGTGGAGATTTTGC
CCAACTTCTTTAAATCCGCT

Product: cbb3-type cytochrome c oxidase subunit I

Products: NA

Alternate protein names: Cytochrome CBB3 subunit 1; Cytochrome c oxidase polypeptide I homolog; Heme B/copper cytochrome c oxidase subunit [H]

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MQKSVPLSYDYSISKLFLYAMIAFGVVGMLIGIVLAFELSFPSLNYIAGEYGIFGRLRPLHTNAVIYGFTLGGIWASWYY
IGQRVLKITYYQHPFLRFVGLLHFWLWILLLVLAVISLFAGLNQSKEYAELMWPLDIIVVIVWVLWGISMFGSMSVRREN
TIYVSLWYYIATYVGIAVMYIFNNLSIPTYFIADMGSIWHSISLYSGSNDALIQWWWGHNAVAFVFTSGLIGTIYYFLPK
ESGQPIFSYKLTLFSFWSLMFVYIWAGGHHLIYSTVPDWVQTLSSVFSVVLILPSWGTAINMLLTMRGQWHQLKESPLIK
FLVLGSTFYMLSTLEGAIQAIKSVNALAHFTDWIVGHVHDGVLGWVGFTLIASMYHMTPRLFKREIYSGRLVDFQFWIMT
LGIVLYFSSMWIAGITQGMMWRDVDQYGNLTYQFIDTVKVLIPYYNIRGVGGLMYFIGFIIFAYNIFMTISAGKKLEREP
NYATPMSRSREVENV

Sequences:

>Translated_495_residues
MQKSVPLSYDYSISKLFLYAMIAFGVVGMLIGIVLAFELSFPSLNYIAGEYGIFGRLRPLHTNAVIYGFTLGGIWASWYY
IGQRVLKITYYQHPFLRFVGLLHFWLWILLLVLAVISLFAGLNQSKEYAELMWPLDIIVVIVWVLWGISMFGSMSVRREN
TIYVSLWYYIATYVGIAVMYIFNNLSIPTYFIADMGSIWHSISLYSGSNDALIQWWWGHNAVAFVFTSGLIGTIYYFLPK
ESGQPIFSYKLTLFSFWSLMFVYIWAGGHHLIYSTVPDWVQTLSSVFSVVLILPSWGTAINMLLTMRGQWHQLKESPLIK
FLVLGSTFYMLSTLEGAIQAIKSVNALAHFTDWIVGHVHDGVLGWVGFTLIASMYHMTPRLFKREIYSGRLVDFQFWIMT
LGIVLYFSSMWIAGITQGMMWRDVDQYGNLTYQFIDTVKVLIPYYNIRGVGGLMYFIGFIIFAYNIFMTISAGKKLEREP
NYATPMSRSREVENV
>Mature_495_residues
MQKSVPLSYDYSISKLFLYAMIAFGVVGMLIGIVLAFELSFPSLNYIAGEYGIFGRLRPLHTNAVIYGFTLGGIWASWYY
IGQRVLKITYYQHPFLRFVGLLHFWLWILLLVLAVISLFAGLNQSKEYAELMWPLDIIVVIVWVLWGISMFGSMSVRREN
TIYVSLWYYIATYVGIAVMYIFNNLSIPTYFIADMGSIWHSISLYSGSNDALIQWWWGHNAVAFVFTSGLIGTIYYFLPK
ESGQPIFSYKLTLFSFWSLMFVYIWAGGHHLIYSTVPDWVQTLSSVFSVVLILPSWGTAINMLLTMRGQWHQLKESPLIK
FLVLGSTFYMLSTLEGAIQAIKSVNALAHFTDWIVGHVHDGVLGWVGFTLIASMYHMTPRLFKREIYSGRLVDFQFWIMT
LGIVLYFSSMWIAGITQGMMWRDVDQYGNLTYQFIDTVKVLIPYYNIRGVGGLMYFIGFIIFAYNIFMTISAGKKLEREP
NYATPMSRSREVENV

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG3278

COG function: function code O; Cbb3-type cytochrome oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004677
- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 56942; Mature: 56942

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKSVPLSYDYSISKLFLYAMIAFGVVGMLIGIVLAFELSFPSLNYIAGEYGIFGRLRPL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCEE
HTNAVIYGFTLGGIWASWYYIGQRVLKITYYQHPFLRFVGLLHFWLWILLLVLAVISLFA
ECCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLNQSKEYAELMWPLDIIVVIVWVLWGISMFGSMSVRRENTIYVSLWYYIATYVGIAVMY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEHHHHHHHHHHHHHHH
IFNNLSIPTYFIADMGSIWHSISLYSGSNDALIQWWWGHNAVAFVFTSGLIGTIYYFLPK
HHHCCCCCHHHHHHHHHHHHEEEEECCCCCCEEEEEECCCEEEHHHHHHHHHHHHHEEEC
ESGQPIFSYKLTLFSFWSLMFVYIWAGGHHLIYSTVPDWVQTLSSVFSVVLILPSWGTAI
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCHHHH
NMLLTMRGQWHQLKESPLIKFLVLGSTFYMLSTLEGAIQAIKSVNALAHFTDWIVGHVHD
HHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GVLGWVGFTLIASMYHMTPRLFKREIYSGRLVDFQFWIMTLGIVLYFSSMWIAGITQGMM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCHH
WRDVDQYGNLTYQFIDTVKVLIPYYNIRGVGGLMYFIGFIIFAYNIFMTISAGKKLEREP
HHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC
NYATPMSRSREVENV
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MQKSVPLSYDYSISKLFLYAMIAFGVVGMLIGIVLAFELSFPSLNYIAGEYGIFGRLRPL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCEE
HTNAVIYGFTLGGIWASWYYIGQRVLKITYYQHPFLRFVGLLHFWLWILLLVLAVISLFA
ECCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLNQSKEYAELMWPLDIIVVIVWVLWGISMFGSMSVRRENTIYVSLWYYIATYVGIAVMY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEHHHHHHHHHHHHHHH
IFNNLSIPTYFIADMGSIWHSISLYSGSNDALIQWWWGHNAVAFVFTSGLIGTIYYFLPK
HHHCCCCCHHHHHHHHHHHHEEEEECCCCCCEEEEEECCCEEEHHHHHHHHHHHHHEEEC
ESGQPIFSYKLTLFSFWSLMFVYIWAGGHHLIYSTVPDWVQTLSSVFSVVLILPSWGTAI
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCHHHH
NMLLTMRGQWHQLKESPLIKFLVLGSTFYMLSTLEGAIQAIKSVNALAHFTDWIVGHVHD
HHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GVLGWVGFTLIASMYHMTPRLFKREIYSGRLVDFQFWIMTLGIVLYFSSMWIAGITQGMM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCHH
WRDVDQYGNLTYQFIDTVKVLIPYYNIRGVGGLMYFIGFIIFAYNIFMTISAGKKLEREP
HHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC
NYATPMSRSREVENV
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]