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The map label for this gene is ctpA [H]

Identifier: 109946895

GI number: 109946895

Start: 230225

End: 231586

Strand: Reverse

Name: ctpA [H]

Synonym: Hac_0279

Alternate gene names: 109946895

Gene position: 231586-230225 (Counterclockwise)

Preceding gene: 109946897

Following gene: 109946894

Centisome position: 14.9

GC content: 40.9

Gene sequence:

>1362_bases
ATGACAAAACGACTTTTTAAAGGGTTGTTAGCGATTTCTCTTGCTGTGAGTTTGCATGGTGGCGAAATTAAGGAAAAAAA
GCCGGCTAAACCAATCAAGGAAAATCCGCAAGAATTAGCGGCTAAAAGGGTGGAAGCGTTCAATCGTTTCACGAATGTGG
TTTCAGAAATTGAAAAAAAATATGTGGATAAAATCACTATTTCTGAAATCATGACTAAAGCGATTGAGGGCTTGCTCTTC
AATTTGGATGCGCATTCAGCGTATTTGAATGAAAAGAAATTCAAGGATTTTCAAGCCCAAACCGAGGGCGAATTTGGAGG
GCTTGGGATCACAGTGGGCATGCGCGATGGCGTTTTGACCGTTGTTGCTCCATTAGAGGGCACTCCAGCTTACAAGGTTG
GGGTTAAATCAGGCGATAAGATTTTAAAAATCAATAACGAAAGCACGCTGAACATGAGCATTGATGATGCGATCAATCTC
ATGCGTGGCAAGCCAAAAACCCCAATCCAAATCACTGTTGTGAGGAAAAAAGAGTCAAAACCTTTAGTGTTTAATATCAT
CAGAGACATCATTAAAATCCCCTCTGTCTCTGTGAAAAAGATTAAGGACACTCCTTATTTATATATAAGGGTGGCTGGTT
TTGACAGGAATGTGACCAAATCGGTTTTAGACGGCTTGAAAGCTAACCCTAACATTAAAGGCATTGTGCTAGATTTAAGG
GGCAATCCTGGAGGCTTACTCAATCAAGCGGTGGGCTTGTCTAACCTCTTCATTAAAGATGGGATTTTAGTCTCTCAAAA
AGGCAAAAATAAAGAAGAAAATTTAGAATACAAAGCCAATGGCAGAGCCCCTTATACGAATTTACCCATGGCGGTGTTAG
TCAATGGCGGTTCAGCGAGCGCGAGTGAGATCGTAGCAGGGGCGTTGCAAGATCACAAACGAGCCGTAATTATCGGTGAA
AAAACCTTTGGTAAAGGAAGCGTGCAAGTGTTACTCCCTGTCAATAAAGATGAAGCGATTAAAATCACGACCGCGCGCTA
TTATTTACCGAGTGGGCGCACCATTCAAGCTAAAGGCATCACGCCTGATATTGTGATTTATCCGGGTAAAGTGCCAGAAA
ATGACAACACATTGAGCCTGAAAGAAGCGGATTTAAAACACCATTTAGAGCAAGAACTTAAAAAGCTTGATGATAAAAAC
CCTAATTCTAAAGAGGCAGATAAAAACAAGAAAGATGAAGAAAAAGAGATCACGCTAGAGATGATCAATAACGACATTCA
GCTAAAAACCGCTATTGACAGCTTGAAAACTTGGTCTATCATTGATAGCCACACAGATGAGAAAACGCCCAAGAAAAAGT
AA

Upstream 100 bases:

>100_bases
TGGGCATGTTATCTAAATTTTAGATAGAATAAACGCAAAAATTGAATAAAACCTTAAGGGTGATTTTTCTAATCTCAAAA
ATGGGTGGTACTATTTAACA

Downstream 100 bases:

>100_bases
AACGCATGGGGTTTTATTTGAAAAATGATAAAACCAAGTTTTAGTTTTAATGTGCATTTTATGAAAACCCTTGCAATCAT
TGGCTTGATTTTAAGCTTTC

Product: carboxy-terminal processing protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 453; Mature: 452

Protein sequence:

>453_residues
MTKRLFKGLLAISLAVSLHGGEIKEKKPAKPIKENPQELAAKRVEAFNRFTNVVSEIEKKYVDKITISEIMTKAIEGLLF
NLDAHSAYLNEKKFKDFQAQTEGEFGGLGITVGMRDGVLTVVAPLEGTPAYKVGVKSGDKILKINNESTLNMSIDDAINL
MRGKPKTPIQITVVRKKESKPLVFNIIRDIIKIPSVSVKKIKDTPYLYIRVAGFDRNVTKSVLDGLKANPNIKGIVLDLR
GNPGGLLNQAVGLSNLFIKDGILVSQKGKNKEENLEYKANGRAPYTNLPMAVLVNGGSASASEIVAGALQDHKRAVIIGE
KTFGKGSVQVLLPVNKDEAIKITTARYYLPSGRTIQAKGITPDIVIYPGKVPENDNTLSLKEADLKHHLEQELKKLDDKN
PNSKEADKNKKDEEKEITLEMINNDIQLKTAIDSLKTWSIIDSHTDEKTPKKK

Sequences:

>Translated_453_residues
MTKRLFKGLLAISLAVSLHGGEIKEKKPAKPIKENPQELAAKRVEAFNRFTNVVSEIEKKYVDKITISEIMTKAIEGLLF
NLDAHSAYLNEKKFKDFQAQTEGEFGGLGITVGMRDGVLTVVAPLEGTPAYKVGVKSGDKILKINNESTLNMSIDDAINL
MRGKPKTPIQITVVRKKESKPLVFNIIRDIIKIPSVSVKKIKDTPYLYIRVAGFDRNVTKSVLDGLKANPNIKGIVLDLR
GNPGGLLNQAVGLSNLFIKDGILVSQKGKNKEENLEYKANGRAPYTNLPMAVLVNGGSASASEIVAGALQDHKRAVIIGE
KTFGKGSVQVLLPVNKDEAIKITTARYYLPSGRTIQAKGITPDIVIYPGKVPENDNTLSLKEADLKHHLEQELKKLDDKN
PNSKEADKNKKDEEKEITLEMINNDIQLKTAIDSLKTWSIIDSHTDEKTPKKK
>Mature_452_residues
TKRLFKGLLAISLAVSLHGGEIKEKKPAKPIKENPQELAAKRVEAFNRFTNVVSEIEKKYVDKITISEIMTKAIEGLLFN
LDAHSAYLNEKKFKDFQAQTEGEFGGLGITVGMRDGVLTVVAPLEGTPAYKVGVKSGDKILKINNESTLNMSIDDAINLM
RGKPKTPIQITVVRKKESKPLVFNIIRDIIKIPSVSVKKIKDTPYLYIRVAGFDRNVTKSVLDGLKANPNIKGIVLDLRG
NPGGLLNQAVGLSNLFIKDGILVSQKGKNKEENLEYKANGRAPYTNLPMAVLVNGGSASASEIVAGALQDHKRAVIIGEK
TFGKGSVQVLLPVNKDEAIKITTARYYLPSGRTIQAKGITPDIVIYPGKVPENDNTLSLKEADLKHHLEQELKKLDDKNP
NSKEADKNKKDEEKEITLEMINNDIQLKTAIDSLKTWSIIDSHTDEKTPKKK

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=326, Percent_Identity=28.5276073619632, Blast_Score=133, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 49910; Mature: 49778

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRLFKGLLAISLAVSLHGGEIKEKKPAKPIKENPQELAAKRVEAFNRFTNVVSEIEKK
CCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YVDKITISEIMTKAIEGLLFNLDAHSAYLNEKKFKDFQAQTEGEFGGLGITVGMRDGVLT
HHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEE
VVAPLEGTPAYKVGVKSGDKILKINNESTLNMSIDDAINLMRGKPKTPIQITVVRKKESK
EEECCCCCCCEEEECCCCCEEEEECCCCEEEEEHHHHHHHHCCCCCCCEEEEEEEECCCC
PLVFNIIRDIIKIPSVSVKKIKDTPYLYIRVAGFDRNVTKSVLDGLKANPNIKGIVLDLR
CHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCCHHHHHHCCCCCCCCCEEEEEEEC
GNPGGLLNQAVGLSNLFIKDGILVSQKGKNKEENLEYKANGRAPYTNLPMAVLVNGGSAS
CCCCCHHHHHHCCCCEEEECCEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCC
ASEIVAGALQDHKRAVIIGEKTFGKGSVQVLLPVNKDEAIKITTARYYLPSGRTIQAKGI
HHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCEEEECCC
TPDIVIYPGKVPENDNTLSLKEADLKHHLEQELKKLDDKNPNSKEADKNKKDEEKEITLE
CCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHEEEE
MINNDIQLKTAIDSLKTWSIIDSHTDEKTPKKK
ECCCCEEEEEHHHHHHEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
TKRLFKGLLAISLAVSLHGGEIKEKKPAKPIKENPQELAAKRVEAFNRFTNVVSEIEKK
CHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YVDKITISEIMTKAIEGLLFNLDAHSAYLNEKKFKDFQAQTEGEFGGLGITVGMRDGVLT
HHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEE
VVAPLEGTPAYKVGVKSGDKILKINNESTLNMSIDDAINLMRGKPKTPIQITVVRKKESK
EEECCCCCCCEEEECCCCCEEEEECCCCEEEEEHHHHHHHHCCCCCCCEEEEEEEECCCC
PLVFNIIRDIIKIPSVSVKKIKDTPYLYIRVAGFDRNVTKSVLDGLKANPNIKGIVLDLR
CHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCCHHHHHHCCCCCCCCCEEEEEEEC
GNPGGLLNQAVGLSNLFIKDGILVSQKGKNKEENLEYKANGRAPYTNLPMAVLVNGGSAS
CCCCCHHHHHHCCCCEEEECCEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCC
ASEIVAGALQDHKRAVIIGEKTFGKGSVQVLLPVNKDEAIKITTARYYLPSGRTIQAKGI
HHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCEEEECCC
TPDIVIYPGKVPENDNTLSLKEADLKHHLEQELKKLDDKNPNSKEADKNKKDEEKEITLE
CCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHEEEE
MINNDIQLKTAIDSLKTWSIIDSHTDEKTPKKK
ECCCCEEEEEHHHHHHEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]