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The map label for this gene is oppA fragment 3 [C]

Identifier: 109946855

GI number: 109946855

Start: 200430

End: 200654

Strand: Direct

Name: oppA fragment 3 [C]

Synonym: Hac_0235

Alternate gene names: 109946855

Gene position: 200430-200654 (Clockwise)

Preceding gene: 109946854

Following gene: 109946856

Centisome position: 12.9

GC content: 38.67

Gene sequence:

>225_bases
GTGGCATGCAAGGGTTTTTTTAACGCACGCCGTGGAATCTTTAAGGATAAAAGGGTGCATGAAACCTTATTCTATGCGTT
TGATTTTGAATGGGCGAATAAAAACTTATTCTTTTCGCAATACAAACGCACCACCAGTTTTTTTAGTAACTCTATTTATG
CATCCCCTCCACTTCCAAGCTCTGAAGAAAAGTTCTGTCAGCCCCTTATGAAAAAGTTTAGATGA

Upstream 100 bases:

>100_bases
TGCATTGAAAGCATGGCTAAAGTTTGGGCCAGGGGCTGCGTAGGGAAAGCCATAGAAAATAAAGAAATCACTAAATATTT
AATCGCCCACAAAATGCCAA

Downstream 100 bases:

>100_bases
AAGGGTTTTTAAAGAGCCTTATGTCGTGCCTAGAACTGATGGGTCTGATGTTTTGGGCTATAATTTAAGGGAAAATTTAA
AATACGCTCAAAAGCTTCTA

Product: peptide ABC transporter system,periplasmic component fragment 3

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: None

Number of amino acids: Translated: 74; Mature: 73

Protein sequence:

>74_residues
MACKGFFNARRGIFKDKRVHETLFYAFDFEWANKNLFFSQYKRTTSFFSNSIYASPPLPSSEEKFCQPLMKKFR

Sequences:

>Translated_74_residues
MACKGFFNARRGIFKDKRVHETLFYAFDFEWANKNLFFSQYKRTTSFFSNSIYASPPLPSSEEKFCQPLMKKFR
>Mature_73_residues
ACKGFFNARRGIFKDKRVHETLFYAFDFEWANKNLFFSQYKRTTSFFSNSIYASPPLPSSEEKFCQPLMKKFR

Specific function: Unknown

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082063, Length=66, Percent_Identity=45.4545454545455, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8880; Mature: 8749

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACKGFFNARRGIFKDKRVHETLFYAFDFEWANKNLFFSQYKRTTSFFSNSIYASPPLPS
CCCCCCHHHHCCCCCCHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHCCCCEECCCCCC
SEEKFCQPLMKKFR
CHHHHHHHHHHHCC
>Mature Secondary Structure 
ACKGFFNARRGIFKDKRVHETLFYAFDFEWANKNLFFSQYKRTTSFFSNSIYASPPLPS
CCCCCHHHHCCCCCCHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHCCCCEECCCCCC
SEEKFCQPLMKKFR
CHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA