| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109946791
Identifier: 109946791
GI number: 109946791
Start: 144135
End: 144947
Strand: Reverse
Name: 109946791
Synonym: Hac_0168
Alternate gene names: NA
Gene position: 144947-144135 (Counterclockwise)
Preceding gene: 109946792
Following gene: 109946790
Centisome position: 9.33
GC content: 37.88
Gene sequence:
>813_bases ATGCAAAATTTTATTGAAATCAAAGCCAAAACATTAGAAGAAGCCCTTATCCAAGCTTCTATCACCCTAAATTGCCCCAT CATCAATTTGCAATACGAGGTCATTCAAACGCCCTCTAAAGGCTTTTTAAGCATCGGTAAAAAAGAAGCCATCATTTTAG CGAGCGTTAAAGAAAGTAAAGAAACTAGCCCTAAAGAAATTACAGAGAATAGCCCTCAAAAAACCAACCTTCAAGAAGTC GACACTCAAAAAACCAATCAAAACACCGAAGAACAAAAATCAATTTCAGAACCAAAAGCGCCCAAAACACCCTCAAAACC TCCTAAAAACCCCCCTAAAAAAGAACTTAGCGACGAAGAAAAACTCAATGAAATCACCAAAGAATTAAAAGATCTCTTCT CCCACTTGCCTTATAAAATCCATAAAGTGGAGGTGAGTTTTTATGAACCGGGGGTGTTATTGATTGATATTGATGGCGAA GATTCCGCTCTTTTAATTGGCGAAAAAGGCTATCGTTACAAAGCCCTTTCTTACTTGCTTTTTAATTGGATCCACCCCAC TTATGGCTATAATATCCGCTTAGAAATCTCTACTTTTTTACAAAACCAAGAAAAGGTTATGGAAGTGCAACTCCAAAGCG TGATCATGACCGTGCATGAAGTGGGTAAGGGGCAAATGAAAGCCCCTGATGGCGTTTTAACCTATATCGCTTTAAAAAAA TTAAGGAAAGCGTTCCCCAACAAATATGTCTCCATCAAAACCAACTTAAACGATGAAAAATGCATCGTCATTAACGACTT CCACCATGAATGA
Upstream 100 bases:
>100_bases ACGAATAATGTTCTTTCAGTGTTGCAACAACTCATTATCAATAAAGTATTAGAAAACAAAAAACACATGCACGAACAAAC CAAAAAATAAAGGAAAATTG
Downstream 100 bases:
>100_bases CACCATTGCCGCTGTCGCTACCCCATTGGGTAAAGGAGCGATTAGTATTGTTAAAATCAGCGGCAATAACGCTTTAAACA TTCTCAAACAACTCACCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MQNFIEIKAKTLEEALIQASITLNCPIINLQYEVIQTPSKGFLSIGKKEAIILASVKESKETSPKEITENSPQKTNLQEV DTQKTNQNTEEQKSISEPKAPKTPSKPPKNPPKKELSDEEKLNEITKELKDLFSHLPYKIHKVEVSFYEPGVLLIDIDGE DSALLIGEKGYRYKALSYLLFNWIHPTYGYNIRLEISTFLQNQEKVMEVQLQSVIMTVHEVGKGQMKAPDGVLTYIALKK LRKAFPNKYVSIKTNLNDEKCIVINDFHHE
Sequences:
>Translated_270_residues MQNFIEIKAKTLEEALIQASITLNCPIINLQYEVIQTPSKGFLSIGKKEAIILASVKESKETSPKEITENSPQKTNLQEV DTQKTNQNTEEQKSISEPKAPKTPSKPPKNPPKKELSDEEKLNEITKELKDLFSHLPYKIHKVEVSFYEPGVLLIDIDGE DSALLIGEKGYRYKALSYLLFNWIHPTYGYNIRLEISTFLQNQEKVMEVQLQSVIMTVHEVGKGQMKAPDGVLTYIALKK LRKAFPNKYVSIKTNLNDEKCIVINDFHHE >Mature_270_residues MQNFIEIKAKTLEEALIQASITLNCPIINLQYEVIQTPSKGFLSIGKKEAIILASVKESKETSPKEITENSPQKTNLQEV DTQKTNQNTEEQKSISEPKAPKTPSKPPKNPPKKELSDEEKLNEITKELKDLFSHLPYKIHKVEVSFYEPGVLLIDIDGE DSALLIGEKGYRYKALSYLLFNWIHPTYGYNIRLEISTFLQNQEKVMEVQLQSVIMTVHEVGKGQMKAPDGVLTYIALKK LRKAFPNKYVSIKTNLNDEKCIVINDFHHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30787; Mature: 30787
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNFIEIKAKTLEEALIQASITLNCPIINLQYEVIQTPSKGFLSIGKKEAIILASVKESK CCCHHHHHHHHHHHHHHHHEEEEECEEEEEEEEEEECCCCHHHHCCCCCEEEEEECCCCC ETSPKEITENSPQKTNLQEVDTQKTNQNTEEQKSISEPKAPKTPSKPPKNPPKKELSDEE CCCCHHHHCCCCCCCCHHHHHCHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHH KLNEITKELKDLFSHLPYKIHKVEVSFYEPGVLLIDIDGEDSALLIGEKGYRYKALSYLL HHHHHHHHHHHHHHHCCEEEEEEEEEEECCCEEEEEECCCCCEEEECCCCCHHHHHHHHH FNWIHPTYGYNIRLEISTFLQNQEKVMEVQLQSVIMTVHEVGKGQMKAPDGVLTYIALKK HHHCCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LRKAFPNKYVSIKTNLNDEKCIVINDFHHE HHHHCCCCEEEEEECCCCCEEEEEECCCCC >Mature Secondary Structure MQNFIEIKAKTLEEALIQASITLNCPIINLQYEVIQTPSKGFLSIGKKEAIILASVKESK CCCHHHHHHHHHHHHHHHHEEEEECEEEEEEEEEEECCCCHHHHCCCCCEEEEEECCCCC ETSPKEITENSPQKTNLQEVDTQKTNQNTEEQKSISEPKAPKTPSKPPKNPPKKELSDEE CCCCHHHHCCCCCCCCHHHHHCHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHH KLNEITKELKDLFSHLPYKIHKVEVSFYEPGVLLIDIDGEDSALLIGEKGYRYKALSYLL HHHHHHHHHHHHHHHCCEEEEEEEEEEECCCEEEEEECCCCCEEEECCCCCHHHHHHHHH FNWIHPTYGYNIRLEISTFLQNQEKVMEVQLQSVIMTVHEVGKGQMKAPDGVLTYIALKK HHHCCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LRKAFPNKYVSIKTNLNDEKCIVINDFHHE HHHHCCCCEEEEEECCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA