Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

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The map label for this gene is 109946791

Identifier: 109946791

GI number: 109946791

Start: 144135

End: 144947

Strand: Reverse

Name: 109946791

Synonym: Hac_0168

Alternate gene names: NA

Gene position: 144947-144135 (Counterclockwise)

Preceding gene: 109946792

Following gene: 109946790

Centisome position: 9.33

GC content: 37.88

Gene sequence:

>813_bases
ATGCAAAATTTTATTGAAATCAAAGCCAAAACATTAGAAGAAGCCCTTATCCAAGCTTCTATCACCCTAAATTGCCCCAT
CATCAATTTGCAATACGAGGTCATTCAAACGCCCTCTAAAGGCTTTTTAAGCATCGGTAAAAAAGAAGCCATCATTTTAG
CGAGCGTTAAAGAAAGTAAAGAAACTAGCCCTAAAGAAATTACAGAGAATAGCCCTCAAAAAACCAACCTTCAAGAAGTC
GACACTCAAAAAACCAATCAAAACACCGAAGAACAAAAATCAATTTCAGAACCAAAAGCGCCCAAAACACCCTCAAAACC
TCCTAAAAACCCCCCTAAAAAAGAACTTAGCGACGAAGAAAAACTCAATGAAATCACCAAAGAATTAAAAGATCTCTTCT
CCCACTTGCCTTATAAAATCCATAAAGTGGAGGTGAGTTTTTATGAACCGGGGGTGTTATTGATTGATATTGATGGCGAA
GATTCCGCTCTTTTAATTGGCGAAAAAGGCTATCGTTACAAAGCCCTTTCTTACTTGCTTTTTAATTGGATCCACCCCAC
TTATGGCTATAATATCCGCTTAGAAATCTCTACTTTTTTACAAAACCAAGAAAAGGTTATGGAAGTGCAACTCCAAAGCG
TGATCATGACCGTGCATGAAGTGGGTAAGGGGCAAATGAAAGCCCCTGATGGCGTTTTAACCTATATCGCTTTAAAAAAA
TTAAGGAAAGCGTTCCCCAACAAATATGTCTCCATCAAAACCAACTTAAACGATGAAAAATGCATCGTCATTAACGACTT
CCACCATGAATGA

Upstream 100 bases:

>100_bases
ACGAATAATGTTCTTTCAGTGTTGCAACAACTCATTATCAATAAAGTATTAGAAAACAAAAAACACATGCACGAACAAAC
CAAAAAATAAAGGAAAATTG

Downstream 100 bases:

>100_bases
CACCATTGCCGCTGTCGCTACCCCATTGGGTAAAGGAGCGATTAGTATTGTTAAAATCAGCGGCAATAACGCTTTAAACA
TTCTCAAACAACTCACCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MQNFIEIKAKTLEEALIQASITLNCPIINLQYEVIQTPSKGFLSIGKKEAIILASVKESKETSPKEITENSPQKTNLQEV
DTQKTNQNTEEQKSISEPKAPKTPSKPPKNPPKKELSDEEKLNEITKELKDLFSHLPYKIHKVEVSFYEPGVLLIDIDGE
DSALLIGEKGYRYKALSYLLFNWIHPTYGYNIRLEISTFLQNQEKVMEVQLQSVIMTVHEVGKGQMKAPDGVLTYIALKK
LRKAFPNKYVSIKTNLNDEKCIVINDFHHE

Sequences:

>Translated_270_residues
MQNFIEIKAKTLEEALIQASITLNCPIINLQYEVIQTPSKGFLSIGKKEAIILASVKESKETSPKEITENSPQKTNLQEV
DTQKTNQNTEEQKSISEPKAPKTPSKPPKNPPKKELSDEEKLNEITKELKDLFSHLPYKIHKVEVSFYEPGVLLIDIDGE
DSALLIGEKGYRYKALSYLLFNWIHPTYGYNIRLEISTFLQNQEKVMEVQLQSVIMTVHEVGKGQMKAPDGVLTYIALKK
LRKAFPNKYVSIKTNLNDEKCIVINDFHHE
>Mature_270_residues
MQNFIEIKAKTLEEALIQASITLNCPIINLQYEVIQTPSKGFLSIGKKEAIILASVKESKETSPKEITENSPQKTNLQEV
DTQKTNQNTEEQKSISEPKAPKTPSKPPKNPPKKELSDEEKLNEITKELKDLFSHLPYKIHKVEVSFYEPGVLLIDIDGE
DSALLIGEKGYRYKALSYLLFNWIHPTYGYNIRLEISTFLQNQEKVMEVQLQSVIMTVHEVGKGQMKAPDGVLTYIALKK
LRKAFPNKYVSIKTNLNDEKCIVINDFHHE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30787; Mature: 30787

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNFIEIKAKTLEEALIQASITLNCPIINLQYEVIQTPSKGFLSIGKKEAIILASVKESK
CCCHHHHHHHHHHHHHHHHEEEEECEEEEEEEEEEECCCCHHHHCCCCCEEEEEECCCCC
ETSPKEITENSPQKTNLQEVDTQKTNQNTEEQKSISEPKAPKTPSKPPKNPPKKELSDEE
CCCCHHHHCCCCCCCCHHHHHCHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHH
KLNEITKELKDLFSHLPYKIHKVEVSFYEPGVLLIDIDGEDSALLIGEKGYRYKALSYLL
HHHHHHHHHHHHHHHCCEEEEEEEEEEECCCEEEEEECCCCCEEEECCCCCHHHHHHHHH
FNWIHPTYGYNIRLEISTFLQNQEKVMEVQLQSVIMTVHEVGKGQMKAPDGVLTYIALKK
HHHCCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
LRKAFPNKYVSIKTNLNDEKCIVINDFHHE
HHHHCCCCEEEEEECCCCCEEEEEECCCCC
>Mature Secondary Structure
MQNFIEIKAKTLEEALIQASITLNCPIINLQYEVIQTPSKGFLSIGKKEAIILASVKESK
CCCHHHHHHHHHHHHHHHHEEEEECEEEEEEEEEEECCCCHHHHCCCCCEEEEEECCCCC
ETSPKEITENSPQKTNLQEVDTQKTNQNTEEQKSISEPKAPKTPSKPPKNPPKKELSDEE
CCCCHHHHCCCCCCCCHHHHHCHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHH
KLNEITKELKDLFSHLPYKIHKVEVSFYEPGVLLIDIDGEDSALLIGEKGYRYKALSYLL
HHHHHHHHHHHHHHHCCEEEEEEEEEEECCCEEEEEECCCCCEEEECCCCCHHHHHHHHH
FNWIHPTYGYNIRLEISTFLQNQEKVMEVQLQSVIMTVHEVGKGQMKAPDGVLTYIALKK
HHHCCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
LRKAFPNKYVSIKTNLNDEKCIVINDFHHE
HHHHCCCCEEEEEECCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA