| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is gltS [H]
Identifier: 109946710
GI number: 109946710
Start: 76679
End: 77905
Strand: Direct
Name: gltS [H]
Synonym: Hac_0078
Alternate gene names: 109946710
Gene position: 76679-77905 (Clockwise)
Preceding gene: 109946708
Following gene: 109946711
Centisome position: 4.93
GC content: 42.05
Gene sequence:
>1227_bases TTGCAAGAAATTAAATTAGACATTTATGCCACTTTGGTGTGCATGGTTTTAGTGTTGCTTTTGGGGCGTTATGTGATTTC TAAAGTCAAGTTTTTACGAGATTATGATATTCCAGAACCTGTTGTGGGTGGGGTTTTGATCGCTTTTTTTATCATGCTAG CCCACCATTTTTATAATTTTGATTTGCGTTTTGATTCTTCTTTAAAAGATCCTTTGATGCTGACTTTCTTTATCACTATT GGTTTGAGTGCGGATTTCAAATCTTTACAAAAAGGCGGGAAAATGCTCGCGGTTTTTTTGTTGGTTGTGTCTGGGTTTGT GGTGTGTCAAAATGTGGTAGGGGTTTCTGTCGCCGGTCTTTTAGGGGTCAATCCTTTAATGGGGCTTTTAGGCGGATCTA TCGCTTTAGTGGGAGGGCATGGCACTAGTGCGGCATGGGCTAATTTTTTCACCCAACCGCCTTATGATTTTAATTCTAGC CTAGAAGTGGGCATGGTGTGTGCGACTTTTGGCTTGGTGAGTGGGGGGATTATTGGGGGGCCTGTCGCTAAATATTTGAT TTCAAGATACAAACTAGAGCCTAAAGACACTAAAGAAAAAGACGCTTTAGAGGGTATTGTGGCTAAAGGTTTTGAAACCC CTAAAGAGCAACGCTTAATCACCGCATCTAGTTTTGTAGAAACTTTAGCTCTAATTGCGATCGCTTTATTGGTGGGGACT TTTTTATCGCATTTGATGCCTAAAAGTTTCACCTTGCCCACTTTTGTGTGGTGCTTGTTTATAGGGGTTCTTTTAAGGAA TGCCTTGTCGTTTTTTAAAATCCATAGCGTGTTTGATAGGGAAGTTTCAGTCATTGGGAATGTGAGCTTGAGCTTGTTTT TGGCTTACGCTTTAATGAGCGTGAATTTGTTAGAATTATTAAAACTCGCTGTGCCATTGGCGATTATTTTGAGCGTTCAA GTGGTGTTTATGATCCTTTATGCGGTGTTTGTGACCTTTAGGATTTGTGGGAAGGATTATGATGCGGCGGTGTTGTGTGC GGGGCATTGCGGTTTTGGGCTTGGAGCGACACCAACAGCTATGGTGAATATGCAAACCATCACCAACCACTATGGGGCGT CGCATGTGGCGTTTATCGTGGTGCCTTTAGTGGGAGCGTTTTTCATTGACATCATCAACGCTTTGGCGATCAAAGGCTTT TTGTCCTTACCCTTTTTCCCATCATGA
Upstream 100 bases:
>100_bases AATACTGTATGCAAGGAACACCTACTTTCTAGCTAATCTCGTTCTTTTAAGTGTCTATTATATTATAATAAGATGAATTG ATTAACCAAAGGAGACAAGC
Downstream 100 bases:
>100_bases GACTTTATGAGAGTTTATTAGAAATTTGTTTGAATAAGGCGTGGGAATACCAGACCCTAGCCTTAGAAAACCCAAGTGTG GCTTGCATGGTGTTAGATAA
Product: sodium/glutamate symport carrier protein
Products: Na (I) [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate permease [H]
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MQEIKLDIYATLVCMVLVLLLGRYVISKVKFLRDYDIPEPVVGGVLIAFFIMLAHHFYNFDLRFDSSLKDPLMLTFFITI GLSADFKSLQKGGKMLAVFLLVVSGFVVCQNVVGVSVAGLLGVNPLMGLLGGSIALVGGHGTSAAWANFFTQPPYDFNSS LEVGMVCATFGLVSGGIIGGPVAKYLISRYKLEPKDTKEKDALEGIVAKGFETPKEQRLITASSFVETLALIAIALLVGT FLSHLMPKSFTLPTFVWCLFIGVLLRNALSFFKIHSVFDREVSVIGNVSLSLFLAYALMSVNLLELLKLAVPLAIILSVQ VVFMILYAVFVTFRICGKDYDAAVLCAGHCGFGLGATPTAMVNMQTITNHYGASHVAFIVVPLVGAFFIDIINALAIKGF LSLPFFPS
Sequences:
>Translated_408_residues MQEIKLDIYATLVCMVLVLLLGRYVISKVKFLRDYDIPEPVVGGVLIAFFIMLAHHFYNFDLRFDSSLKDPLMLTFFITI GLSADFKSLQKGGKMLAVFLLVVSGFVVCQNVVGVSVAGLLGVNPLMGLLGGSIALVGGHGTSAAWANFFTQPPYDFNSS LEVGMVCATFGLVSGGIIGGPVAKYLISRYKLEPKDTKEKDALEGIVAKGFETPKEQRLITASSFVETLALIAIALLVGT FLSHLMPKSFTLPTFVWCLFIGVLLRNALSFFKIHSVFDREVSVIGNVSLSLFLAYALMSVNLLELLKLAVPLAIILSVQ VVFMILYAVFVTFRICGKDYDAAVLCAGHCGFGLGATPTAMVNMQTITNHYGASHVAFIVVPLVGAFFIDIINALAIKGF LSLPFFPS >Mature_408_residues MQEIKLDIYATLVCMVLVLLLGRYVISKVKFLRDYDIPEPVVGGVLIAFFIMLAHHFYNFDLRFDSSLKDPLMLTFFITI GLSADFKSLQKGGKMLAVFLLVVSGFVVCQNVVGVSVAGLLGVNPLMGLLGGSIALVGGHGTSAAWANFFTQPPYDFNSS LEVGMVCATFGLVSGGIIGGPVAKYLISRYKLEPKDTKEKDALEGIVAKGFETPKEQRLITASSFVETLALIAIALLVGT FLSHLMPKSFTLPTFVWCLFIGVLLRNALSFFKIHSVFDREVSVIGNVSLSLFLAYALMSVNLLELLKLAVPLAIILSVQ VVFMILYAVFVTFRICGKDYDAAVLCAGHCGFGLGATPTAMVNMQTITNHYGASHVAFIVVPLVGAFFIDIINALAIKGF LSLPFFPS
Specific function: Catalyzes the sodium-dependent uptake of extracellular glutamate [H]
COG id: COG0786
COG function: function code E; Na+/glutamate symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gltS symporter family [H]
Homologues:
Organism=Escherichia coli, GI1790085, Length=386, Percent_Identity=54.9222797927461, Blast_Score=380, Evalue=1e-106,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004445 [H]
Pfam domain/function: PF03616 Glt_symporter [H]
EC number: NA
Molecular weight: Translated: 44156; Mature: 44156
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEIKLDIYATLVCMVLVLLLGRYVISKVKFLRDYDIPEPVVGGVLIAFFIMLAHHFYNF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC DLRFDSSLKDPLMLTFFITIGLSADFKSLQKGGKMLAVFLLVVSGFVVCQNVVGVSVAGL EEEECCCCCCHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGVNPLMGLLGGSIALVGGHGTSAAWANFFTQPPYDFNSSLEVGMVCATFGLVSGGIIGG HHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH PVAKYLISRYKLEPKDTKEKDALEGIVAKGFETPKEQRLITASSFVETLALIAIALLVGT HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FLSHLMPKSFTLPTFVWCLFIGVLLRNALSFFKIHSVFDREVSVIGNVSLSLFLAYALMS HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNLLELLKLAVPLAIILSVQVVFMILYAVFVTFRICGKDYDAAVLCAGHCGFGLGATPTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHH MVNMQTITNHYGASHVAFIVVPLVGAFFIDIINALAIKGFLSLPFFPS HEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQEIKLDIYATLVCMVLVLLLGRYVISKVKFLRDYDIPEPVVGGVLIAFFIMLAHHFYNF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC DLRFDSSLKDPLMLTFFITIGLSADFKSLQKGGKMLAVFLLVVSGFVVCQNVVGVSVAGL EEEECCCCCCHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGVNPLMGLLGGSIALVGGHGTSAAWANFFTQPPYDFNSSLEVGMVCATFGLVSGGIIGG HHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH PVAKYLISRYKLEPKDTKEKDALEGIVAKGFETPKEQRLITASSFVETLALIAIALLVGT HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FLSHLMPKSFTLPTFVWCLFIGVLLRNALSFFKIHSVFDREVSVIGNVSLSLFLAYALMS HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNLLELLKLAVPLAIILSVQVVFMILYAVFVTFRICGKDYDAAVLCAGHCGFGLGATPTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHH MVNMQTITNHYGASHVAFIVVPLVGAFFIDIINALAIKGFLSLPFFPS HEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Na (I) [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Na (I) [Periplasm] + L-glutamate [Periplasm] = Na (I) [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2254324; 2017136; 7686882; 9278503; 1544582 [H]