| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is frpB [H]
Identifier: 109946704
GI number: 109946704
Start: 69844
End: 72435
Strand: Reverse
Name: frpB [H]
Synonym: Hac_0072
Alternate gene names: 109946704
Gene position: 72435-69844 (Counterclockwise)
Preceding gene: 109946705
Following gene: 109946703
Centisome position: 4.66
GC content: 43.83
Gene sequence:
>2592_bases ATGCTCAGAAATAGATTTCGTATTGTATTTGTCTCCTGTATTGTCGCTAGCAGTTTGCAAGCTCAAGAAGAAACCCACAC TTTGGGTAAGGTAACCACGCTAGGCGAAAGGACCTTTGAGTATAACAATAAAATGTATATTGAAAGAAAAGAGCTCCAAC AACGCCAAAGTAACCAAGTCCGTGATATTTTTAGGACTAGAGCCGATGTGAATGTGGCTAGTGGGGGCTTAATGGCACAA AAGATTTATGTTAGGGGGATTGAAAGCCGTCTCTTAAGGGTAACGATCGATGGCGTCGCTCAAAATGGTAATATTTTCCA CCATGACGCTAACACCGTAATCGATCCTAACATGATCAAAGAAGTGGAAGTCATCAAAGGTGCAGCGAACGCTTCAGCGG GTCCGGGTGCGGTGGCAGGTAAATTGTCTTTCACCACGATTGACGCTAACGACTTTTTAAGGAAAAATCAAACTTATGGT GCCAAAATGGAAGCGGGCTTTTACACTAACTTTGGATACCGCATGAACGCCACTGCAGCTTACCGTGGGAAAAATTGGGA TATTCTTGCGTATTACAACCATCAAGATATTTTTTATTACAGAGATGGGAACAACGCTTTTAGGAGTCTCTTCCACCCCA ATTTTGACTTGCAAGATCCAAGCAATAGTGATATTGGCGTAGGGACTCCTAGTGAAGTCAATAGTGTTTTAGGCAAAGTC AATGGCTATATCAACGACACGGACACCATCAGCTTAAGCTATAACATGACAAGGGAAAATTCCACTAGGCTCTTACGCCC CAACACCACATCAGCTCTTTCTAAAGCCAACGATCCAGGAAGCCAACCAGCACCTTTTGTGATTGACTTTGGGAAAGAGT TAGCCCATACGATCAACTTCAACCACAATTTGAGCTTGAAATACAAGCATGACGGTGGTACTAGATTTGGTCAGCCTCGC ATTGAATCCACCGCCTTTTTAGGGGTAAGGGGAGGCGATTATAACCCTGTGGTGAATCCTTTCGCTTATAATTCCAACGA GCCAGCCAACCCAGATTACATTCCTGAAGTTAAGGATTGGTGTAACAACCCCGATAATATCAGCCAGTGCACGCAAGGGG CTATCAGACCCTCTGATGGAGGCTATCAAATAGGCTATGGGAAGCCGGGTGCAATCGATTGGCAAAACACTTCTATGATT TCTACAGGCTCTAATATTTACCATGGGCTTGTTCCTAAAAACCCTGATTACGACATGACCCCTCCAAACGCTGAAAACAC CGCTTCTAACGATTGGACTTTAGGGAATGCGGACGCTGAGGGGACTTTAGCGAGAAGGATTTTCTTAATCAACTCGGGTG TTAATTTCAAAGTCACCCACCCCATTAGCGAAGACTATGGGAATGTGTTTGAATACGGCATGATTTATCAAAATTTGAGC GTTTTCTCTGGATTGGATAAAGGTAAAAACGGCTACTATAAAAACAACATTAACCCTAACGACCCTAACGGCTTGGGCTT GCCTTACCGCCACTATTACACCGATCAAAGCTCCCAATACCCTCAAAATTTGAACACGCCTAATCCGCTCTATCGTAACA TGCCCCAAAATTCGCATGCGATTGGCAATATCATCGGTGGGTTTATGCAGGCCAACTACAATCTTTTGGAAAATCTCATC GTGGGTGCGGGAACTCGTTATGATATTTACACCTTGCTAGATAAAAACGGTCGTACGCATGTGACTTCTGGCTTTTCACC TTCTGCAACCGTGCTTTATAACCCTATTGAAAGCATTGGCTTGAAAGTGAGCTACGCGTATGTGACTAAGGGAGCTTTAC CGGGAGATGGCGTTTTGATGCGCGATCCCACAGTGATTTATCAAAGGAATTTGCGCCCTGCAATCGGTCAAAATGTGGAA TTCAATGTGGATTACAACAGCAAGTATTTCAATGTGCGTGGGGCAGCGTTCTATCAAGTGATCAACAACTTCATCAACAG CTATGGGCAAGACACCTCTAAAAATGGTGGGGGTAATGCAACGGCAAAAAACATGTCAGGGAATTTACCTGAAACCATCA ATATCTATGGTTATGAAGTTTCAGGGAATGTGCAATATAAAAATTTCGTAGGGACTTTCTCAGTGGCACGCTCTTGGCCG ACAGCTAGGGGGCATTTATTAGCCGATACTTACGCACTAGCTGCAACCACAGGGAATGTATTTATCCTAAAAGCCGATTA CAATATCCATAAATGGGGGCTTACCTTGACTTGGCTCTCACGCTTTGTAACCAACATGTTTTATGAAGGCTATTCTATTT ACTATCCGCAATACGGCTTGATGAAAATCCATAAACCTGGGTATGGCGTACATAATGTCTTTGTCAACTGGACTCCCACT TCTAAAAAATGGCAGGGCTTAAGGATTTCAGCCGTGTTTAACAATATCTTAAACAAGCAATATATCAGTCAGGCTTCAGT ATGGCAAGCGAGTGCAGACGCTCCAGCGAGCGATATGATCCCTAAAGACAAACGCATGGCACTTCCGGCTCCTGGATTTA ATGCGCGTTTTGAGGTGTCCTATCAGTTCTAA
Upstream 100 bases:
>100_bases AACAAAATTTAAGGTATTATTAAATAGAATAGTGTAATAATAATCTAGGTTCAAGAAGATTAACTCCTAGAGAAAAAGTA AAGAAAAAGGCTAAAAAGAA
Downstream 100 bases:
>100_bases ATTGAAAGAAATCTTAGGATTTCTTTTTGAATTTTGAACATGAAAAAACCTTACAAAAATTACCAAACCTTATGGAAAAA GTTCCGCTCGCTCAACAGAC
Product: iron-regulated outer membrane protein
Products: NA
Alternate protein names: Brucella heme uptake protein A [H]
Number of amino acids: Translated: 863; Mature: 863
Protein sequence:
>863_residues MLRNRFRIVFVSCIVASSLQAQEETHTLGKVTTLGERTFEYNNKMYIERKELQQRQSNQVRDIFRTRADVNVASGGLMAQ KIYVRGIESRLLRVTIDGVAQNGNIFHHDANTVIDPNMIKEVEVIKGAANASAGPGAVAGKLSFTTIDANDFLRKNQTYG AKMEAGFYTNFGYRMNATAAYRGKNWDILAYYNHQDIFYYRDGNNAFRSLFHPNFDLQDPSNSDIGVGTPSEVNSVLGKV NGYINDTDTISLSYNMTRENSTRLLRPNTTSALSKANDPGSQPAPFVIDFGKELAHTINFNHNLSLKYKHDGGTRFGQPR IESTAFLGVRGGDYNPVVNPFAYNSNEPANPDYIPEVKDWCNNPDNISQCTQGAIRPSDGGYQIGYGKPGAIDWQNTSMI STGSNIYHGLVPKNPDYDMTPPNAENTASNDWTLGNADAEGTLARRIFLINSGVNFKVTHPISEDYGNVFEYGMIYQNLS VFSGLDKGKNGYYKNNINPNDPNGLGLPYRHYYTDQSSQYPQNLNTPNPLYRNMPQNSHAIGNIIGGFMQANYNLLENLI VGAGTRYDIYTLLDKNGRTHVTSGFSPSATVLYNPIESIGLKVSYAYVTKGALPGDGVLMRDPTVIYQRNLRPAIGQNVE FNVDYNSKYFNVRGAAFYQVINNFINSYGQDTSKNGGGNATAKNMSGNLPETINIYGYEVSGNVQYKNFVGTFSVARSWP TARGHLLADTYALAATTGNVFILKADYNIHKWGLTLTWLSRFVTNMFYEGYSIYYPQYGLMKIHKPGYGVHNVFVNWTPT SKKWQGLRISAVFNNILNKQYISQASVWQASADAPASDMIPKDKRMALPAPGFNARFEVSYQF
Sequences:
>Translated_863_residues MLRNRFRIVFVSCIVASSLQAQEETHTLGKVTTLGERTFEYNNKMYIERKELQQRQSNQVRDIFRTRADVNVASGGLMAQ KIYVRGIESRLLRVTIDGVAQNGNIFHHDANTVIDPNMIKEVEVIKGAANASAGPGAVAGKLSFTTIDANDFLRKNQTYG AKMEAGFYTNFGYRMNATAAYRGKNWDILAYYNHQDIFYYRDGNNAFRSLFHPNFDLQDPSNSDIGVGTPSEVNSVLGKV NGYINDTDTISLSYNMTRENSTRLLRPNTTSALSKANDPGSQPAPFVIDFGKELAHTINFNHNLSLKYKHDGGTRFGQPR IESTAFLGVRGGDYNPVVNPFAYNSNEPANPDYIPEVKDWCNNPDNISQCTQGAIRPSDGGYQIGYGKPGAIDWQNTSMI STGSNIYHGLVPKNPDYDMTPPNAENTASNDWTLGNADAEGTLARRIFLINSGVNFKVTHPISEDYGNVFEYGMIYQNLS VFSGLDKGKNGYYKNNINPNDPNGLGLPYRHYYTDQSSQYPQNLNTPNPLYRNMPQNSHAIGNIIGGFMQANYNLLENLI VGAGTRYDIYTLLDKNGRTHVTSGFSPSATVLYNPIESIGLKVSYAYVTKGALPGDGVLMRDPTVIYQRNLRPAIGQNVE FNVDYNSKYFNVRGAAFYQVINNFINSYGQDTSKNGGGNATAKNMSGNLPETINIYGYEVSGNVQYKNFVGTFSVARSWP TARGHLLADTYALAATTGNVFILKADYNIHKWGLTLTWLSRFVTNMFYEGYSIYYPQYGLMKIHKPGYGVHNVFVNWTPT SKKWQGLRISAVFNNILNKQYISQASVWQASADAPASDMIPKDKRMALPAPGFNARFEVSYQF >Mature_863_residues MLRNRFRIVFVSCIVASSLQAQEETHTLGKVTTLGERTFEYNNKMYIERKELQQRQSNQVRDIFRTRADVNVASGGLMAQ KIYVRGIESRLLRVTIDGVAQNGNIFHHDANTVIDPNMIKEVEVIKGAANASAGPGAVAGKLSFTTIDANDFLRKNQTYG AKMEAGFYTNFGYRMNATAAYRGKNWDILAYYNHQDIFYYRDGNNAFRSLFHPNFDLQDPSNSDIGVGTPSEVNSVLGKV NGYINDTDTISLSYNMTRENSTRLLRPNTTSALSKANDPGSQPAPFVIDFGKELAHTINFNHNLSLKYKHDGGTRFGQPR IESTAFLGVRGGDYNPVVNPFAYNSNEPANPDYIPEVKDWCNNPDNISQCTQGAIRPSDGGYQIGYGKPGAIDWQNTSMI STGSNIYHGLVPKNPDYDMTPPNAENTASNDWTLGNADAEGTLARRIFLINSGVNFKVTHPISEDYGNVFEYGMIYQNLS VFSGLDKGKNGYYKNNINPNDPNGLGLPYRHYYTDQSSQYPQNLNTPNPLYRNMPQNSHAIGNIIGGFMQANYNLLENLI VGAGTRYDIYTLLDKNGRTHVTSGFSPSATVLYNPIESIGLKVSYAYVTKGALPGDGVLMRDPTVIYQRNLRPAIGQNVE FNVDYNSKYFNVRGAAFYQVINNFINSYGQDTSKNGGGNATAKNMSGNLPETINIYGYEVSGNVQYKNFVGTFSVARSWP TARGHLLADTYALAATTGNVFILKADYNIHKWGLTLTWLSRFVTNMFYEGYSIYYPQYGLMKIHKPGYGVHNVFVNWTPT SKKWQGLRISAVFNNILNKQYISQASVWQASADAPASDMIPKDKRMALPAPGFNARFEVSYQF
Specific function: Heme transporter playing an important role in stationary-phase iron acquisition and required for maintenance of chronic infection in mice [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 96192; Mature: 96192
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRNRFRIVFVSCIVASSLQAQEETHTLGKVTTLGERTFEYNNKMYIERKELQQRQSNQV CCCCCEEEEEEEHHHHHHHHHHHHHHHHHHEEECCCCEEECCCEEEEEHHHHHHHHHHHH RDIFRTRADVNVASGGLMAQKIYVRGIESRLLRVTIDGVAQNGNIFHHDANTVIDPNMIK HHHHHHHCCCEECCCCCEEHHHHHCCCCCEEEEEEEEEEECCCCEEEECCCCEECCHHHH EVEVIKGAANASAGPGAVAGKLSFTTIDANDFLRKNQTYGAKMEAGFYTNFGYRMNATAA HHHHHHCCCCCCCCCCCEEEEEEEEEECHHHHHHCCCCCCCEEECCEEECCCEEECCEEE YRGKNWDILAYYNHQDIFYYRDGNNAFRSLFHPNFDLQDPSNSDIGVGTPSEVNSVLGKV ECCCCCEEEEEECCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH NGYINDTDTISLSYNMTRENSTRLLRPNTTSALSKANDPGSQPAPFVIDFGKELAHTINF CCEECCCEEEEEEEEECCCCCCEEECCCCHHHHHCCCCCCCCCCCEEEECCHHHHHHCCC NHNLSLKYKHDGGTRFGQPRIESTAFLGVRGGDYNPVVNPFAYNSNEPANPDYIPEVKDW CCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCHHHH CNNPDNISQCTQGAIRPSDGGYQIGYGKPGAIDWQNTSMISTGSNIYHGLVPKNPDYDMT CCCCCCHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCEEEECCCCEEECCCCCCCCCCCC PPNAENTASNDWTLGNADAEGTLARRIFLINSGVNFKVTHPISEDYGNVFEYGMIYQNLS CCCCCCCCCCCCEECCCCCCCEEEEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHH VFSGLDKGKNGYYKNNINPNDPNGLGLPYRHYYTDQSSQYPQNLNTPNPLYRNMPQNSHA HHHCCCCCCCCCEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHCCCCCCCH IGNIIGGFMQANYNLLENLIVGAGTRYDIYTLLDKNGRTHVTSGFSPSATVLYNPIESIG HHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEEECCCCEEEECCCCCCCEEEECCHHHCC LKVSYAYVTKGALPGDGVLMRDPTVIYQRNLRPAIGQNVEFNVDYNSKYFNVRGAAFYQV EEEEEEEEECCCCCCCCEEEECCEEEEECCCCHHHCCCEEEEEECCCEEEEECHHHHHHH INNFINSYGQDTSKNGGGNATAKNMSGNLPETINIYGYEVSGNVQYKNFVGTFSVARSWP HHHHHHHHCCCCCCCCCCCCEECCCCCCCCCEEEEEEEEEECCEEEEEEEEEHHHHHCCC TARGHLLADTYALAATTGNVFILKADYNIHKWGLTLTWLSRFVTNMFYEGYSIYYPQYGL CCCCCEEEEEEEEEEECCCEEEEEECCCEEECCHHHHHHHHHHHHHHHCCEEEEECCCCE MKIHKPGYGVHNVFVNWTPTSKKWQGLRISAVFNNILNKQYISQASVWQASADAPASDMI EEEECCCCCEEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHEECCCCCCHHHCC PKDKRMALPAPGFNARFEVSYQF CCCCCEECCCCCCCCEEEEEECC >Mature Secondary Structure MLRNRFRIVFVSCIVASSLQAQEETHTLGKVTTLGERTFEYNNKMYIERKELQQRQSNQV CCCCCEEEEEEEHHHHHHHHHHHHHHHHHHEEECCCCEEECCCEEEEEHHHHHHHHHHHH RDIFRTRADVNVASGGLMAQKIYVRGIESRLLRVTIDGVAQNGNIFHHDANTVIDPNMIK HHHHHHHCCCEECCCCCEEHHHHHCCCCCEEEEEEEEEEECCCCEEEECCCCEECCHHHH EVEVIKGAANASAGPGAVAGKLSFTTIDANDFLRKNQTYGAKMEAGFYTNFGYRMNATAA HHHHHHCCCCCCCCCCCEEEEEEEEEECHHHHHHCCCCCCCEEECCEEECCCEEECCEEE YRGKNWDILAYYNHQDIFYYRDGNNAFRSLFHPNFDLQDPSNSDIGVGTPSEVNSVLGKV ECCCCCEEEEEECCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH NGYINDTDTISLSYNMTRENSTRLLRPNTTSALSKANDPGSQPAPFVIDFGKELAHTINF CCEECCCEEEEEEEEECCCCCCEEECCCCHHHHHCCCCCCCCCCCEEEECCHHHHHHCCC NHNLSLKYKHDGGTRFGQPRIESTAFLGVRGGDYNPVVNPFAYNSNEPANPDYIPEVKDW CCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCHHHH CNNPDNISQCTQGAIRPSDGGYQIGYGKPGAIDWQNTSMISTGSNIYHGLVPKNPDYDMT CCCCCCHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCEEEECCCCEEECCCCCCCCCCCC PPNAENTASNDWTLGNADAEGTLARRIFLINSGVNFKVTHPISEDYGNVFEYGMIYQNLS CCCCCCCCCCCCEECCCCCCCEEEEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHH VFSGLDKGKNGYYKNNINPNDPNGLGLPYRHYYTDQSSQYPQNLNTPNPLYRNMPQNSHA HHHCCCCCCCCCEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHCCCCCCCH IGNIIGGFMQANYNLLENLIVGAGTRYDIYTLLDKNGRTHVTSGFSPSATVLYNPIESIG HHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEEECCCCEEEECCCCCCCEEEECCHHHCC LKVSYAYVTKGALPGDGVLMRDPTVIYQRNLRPAIGQNVEFNVDYNSKYFNVRGAAFYQV EEEEEEEEECCCCCCCCEEEECCEEEEECCCCHHHCCCEEEEEECCCEEEEECHHHHHHH INNFINSYGQDTSKNGGGNATAKNMSGNLPETINIYGYEVSGNVQYKNFVGTFSVARSWP HHHHHHHHCCCCCCCCCCCCEECCCCCCCCCEEEEEEEEEECCEEEEEEEEEHHHHHCCC TARGHLLADTYALAATTGNVFILKADYNIHKWGLTLTWLSRFVTNMFYEGYSIYYPQYGL CCCCCEEEEEEEEEEECCCEEEEEECCCEEECCHHHHHHHHHHHHHHHCCEEEEECCCCE MKIHKPGYGVHNVFVNWTPTSKKWQGLRISAVFNNILNKQYISQASVWQASADAPASDMI EEEECCCCCEEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHEECCCCCCHHHCC PKDKRMALPAPGFNARFEVSYQF CCCCCEECCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA