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The map label for this gene is comL

Identifier: 109946693

GI number: 109946693

Start: 59382

End: 60035

Strand: Reverse

Name: comL

Synonym: Hac_0060

Alternate gene names: NA

Gene position: 60035-59382 (Counterclockwise)

Preceding gene: 109946702

Following gene: 109946692

Centisome position: 3.86

GC content: 37.16

Gene sequence:

>654_bases
TTGAAACATTTTAAAACATTTCTTTTTATCATAATGGCAGTTATTGTGGTAAGCACAGGTTGTACGAATAAAAAGAAAAA
AGATGAATACAACAAACCGGCGATCTTTTGGTATCAAGGGATTTTAAGAGAAATCCTTTTTGGCAATTTAGAAACAGCAG
ACAATTATTATTCTTCCTTACAAAGCGAACACATCAACTCCCCCCTTGTCCCAGAGGCCATGTTGGCTTTAGGGCAAGCA
CACATGAAAAAGAAAGAATATGTTTTGGCGTCTTTTTATTTTGATGAATATATCAAGCGCTTTGGGACGGAAGACAATGT
GGATTATTTGACTTTTTTGAAACTGCAATCGCATTATTACGCTTTTAAAAACCACTCCAAAGACCAGGAATTTATCTCTA
ACTCCATTGTCAATTTGGGTGAATTTATAGAAAAATACCCTAACAGCCGCTACCGCCCTTATGTGGAATACATGCAAGTG
AAATTTATTTTGGGGCAAAATGAGCTCAATCGTGCGATCGCAAATGTTTATAGGAAACGCCACAAACCTGAGGGCGTGAA
ACGCTATTTAGAAAGAGTGGATGAGACTTTAGAGAAAGAGACTAAACCCAAACCATCACACATGCCTTGGTATGTGTTGA
TTTTTGATTGGTAG

Upstream 100 bases:

>100_bases
TTATAAAATCAATTTTTGCTAGTTTTGGGTATAATTTGAAAAAGATAGGTTTAGCCTTTTAAACAATTCAAAAAACTTAT
ACAAGATAGGTGGCATGCAT

Downstream 100 bases:

>100_bases
GATATTTCAAACCATACAAACCATAACAGAGAGATGAAAAATGACTGAATATTTTCCTAGAATTCTGCCCGTGTTGGTAG
AAGAAGACACTTTTTTATAC

Product: competence lipoprotein

Products: NA

Alternate protein names: Lipoprotein; TPR Repeat-Containing Protein; DNA Uptake Lipoprotein-Like; Competence Lipoprotein ComL; Outer Membrane Assembly Lipoprotein Yfio; TRNA-Methyltransferase; DNA Uptake Lipoprotein; Outer Membrane Assembly Lipoprotein YfiO

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKHFKTFLFIIMAVIVVSTGCTNKKKKDEYNKPAIFWYQGILREILFGNLETADNYYSSLQSEHINSPLVPEAMLALGQA
HMKKKEYVLASFYFDEYIKRFGTEDNVDYLTFLKLQSHYYAFKNHSKDQEFISNSIVNLGEFIEKYPNSRYRPYVEYMQV
KFILGQNELNRAIANVYRKRHKPEGVKRYLERVDETLEKETKPKPSHMPWYVLIFDW

Sequences:

>Translated_217_residues
MKHFKTFLFIIMAVIVVSTGCTNKKKKDEYNKPAIFWYQGILREILFGNLETADNYYSSLQSEHINSPLVPEAMLALGQA
HMKKKEYVLASFYFDEYIKRFGTEDNVDYLTFLKLQSHYYAFKNHSKDQEFISNSIVNLGEFIEKYPNSRYRPYVEYMQV
KFILGQNELNRAIANVYRKRHKPEGVKRYLERVDETLEKETKPKPSHMPWYVLIFDW
>Mature_217_residues
MKHFKTFLFIIMAVIVVSTGCTNKKKKDEYNKPAIFWYQGILREILFGNLETADNYYSSLQSEHINSPLVPEAMLALGQA
HMKKKEYVLASFYFDEYIKRFGTEDNVDYLTFLKLQSHYYAFKNHSKDQEFISNSIVNLGEFIEKYPNSRYRPYVEYMQV
KFILGQNELNRAIANVYRKRHKPEGVKRYLERVDETLEKETKPKPSHMPWYVLIFDW

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25917; Mature: 25917

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00055 RIBOSOMAL_S12

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHFKTFLFIIMAVIVVSTGCTNKKKKDEYNKPAIFWYQGILREILFGNLETADNYYSSL
CCHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
QSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTEDNVDYLTFLKLQSHYY
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
AFKNHSKDQEFISNSIVNLGEFIEKYPNSRYRPYVEYMQVKFILGQNELNRAIANVYRKR
HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHH
HKPEGVKRYLERVDETLEKETKPKPSHMPWYVLIFDW
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MKHFKTFLFIIMAVIVVSTGCTNKKKKDEYNKPAIFWYQGILREILFGNLETADNYYSSL
CCHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
QSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTEDNVDYLTFLKLQSHYY
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
AFKNHSKDQEFISNSIVNLGEFIEKYPNSRYRPYVEYMQVKFILGQNELNRAIANVYRKR
HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHH
HKPEGVKRYLERVDETLEKETKPKPSHMPWYVLIFDW
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA