Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

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The map label for this gene is 109946683

Identifier: 109946683

GI number: 109946683

Start: 46945

End: 47940

Strand: Direct

Name: 109946683

Synonym: Hac_0049

Alternate gene names: NA

Gene position: 46945-47940 (Clockwise)

Preceding gene: 109946682

Following gene: 109946684

Centisome position: 3.02

GC content: 37.45

Gene sequence:

>996_bases
ATGCTTTGCAAAGCCCTTATTGTTCTATTGTTTTTTGTGAATGGCTTAGGGGCTTATGATTTCAAGCATTGTCAGGCATT
TTTTCAAAAAGCCAGTCTTCAAAAAGGGGGTGTGGCTTTAAAAGAGTTGCCTAAAGGCGTGTATTTATATTATTCTAAAA
CCTACCCTAAACATGCCAAAGTCATCAAATCCGATCCTTTTATAGGGTTGTATTTGTTGCAAAGTGCACCAAGTGCTTAC
GCTTATACTTTAAGGGATTTAGATAAAAACGCTCTCACAAGACCTATGGCTAGCGTGGGGGCAAACCAAGTCACAGAAGT
GCAATTACTCTCTAAGCAAAAAGGCTATAACCATTACGCTCGCATTTCGCAAGCGATTCAAAAAAATGGTGTCATTAGCA
ATATTTGCTATCAAATGTTAGGGCTAGGGGTAGGGGGGAATGGTTTTATAGAAACAAAATTTATCAAGCGTTTTTTAAGC
CAAAAAGAGCCTTATTATGGGGATATTGGGGTGCGTTTAGAAGAATATCATAAGCGTTTAGTGGTAGTGCAATTTGATCC
CTTTTTCCCCAAAAACCCTTTTTTAAAAAACGATGAAATCATAGCGATCAATGATCAAAAAATCCATTCGTTAGCGGAGT
TTGAATGGGTAGTGAGCAATCTCAAATACCAAAGCCTTGTTAGAGTGAAAATCAAGCGGAACCGCCAAATCAAAGAAGTA
ACGCTTAAAGTCAATAAGCGTTATGGGGGGTTTTTACTCAAAGACACTTTTTTAGAACGCTATAATATCGCTTTAGATGA
GCGTTTTGTAATCACTAAAATAGGCAGTCATTTACCCAAAGGCTTGGATTTTTTAAAGCTTGGGGATAGGATTTTATGGG
TGAATCGTAAAGATGTAGCCTTCAATCAAAAAGCTTTAAGAGAAGCATTGAGTGCACCTAAAATTGAATTGTTGGTGTTG
CGTAAAGGCTTTGAATTTTACATTAAAGCGCGTTGA

Upstream 100 bases:

>100_bases
AAATCTATTTGATGAGCGCTTTGAATGATGGGTATAAATCCGTAGAAGAAAACAGAAAAAATTTAGCTTTTAGTATGTTG
GGGAATTTTGCCAAATTGTG

Downstream 100 bases:

>100_bases
AACATTGATGAAAAATGACGCTTATGAAATTATTCTTTCTTGGTTTATCACACCGCTCACGGCGATTTTAGGGCGTTTTG
CTGAATTTTTTCTCTACACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MLCKALIVLLFFVNGLGAYDFKHCQAFFQKASLQKGGVALKELPKGVYLYYSKTYPKHAKVIKSDPFIGLYLLQSAPSAY
AYTLRDLDKNALTRPMASVGANQVTEVQLLSKQKGYNHYARISQAIQKNGVISNICYQMLGLGVGGNGFIETKFIKRFLS
QKEPYYGDIGVRLEEYHKRLVVVQFDPFFPKNPFLKNDEIIAINDQKIHSLAEFEWVVSNLKYQSLVRVKIKRNRQIKEV
TLKVNKRYGGFLLKDTFLERYNIALDERFVITKIGSHLPKGLDFLKLGDRILWVNRKDVAFNQKALREALSAPKIELLVL
RKGFEFYIKAR

Sequences:

>Translated_331_residues
MLCKALIVLLFFVNGLGAYDFKHCQAFFQKASLQKGGVALKELPKGVYLYYSKTYPKHAKVIKSDPFIGLYLLQSAPSAY
AYTLRDLDKNALTRPMASVGANQVTEVQLLSKQKGYNHYARISQAIQKNGVISNICYQMLGLGVGGNGFIETKFIKRFLS
QKEPYYGDIGVRLEEYHKRLVVVQFDPFFPKNPFLKNDEIIAINDQKIHSLAEFEWVVSNLKYQSLVRVKIKRNRQIKEV
TLKVNKRYGGFLLKDTFLERYNIALDERFVITKIGSHLPKGLDFLKLGDRILWVNRKDVAFNQKALREALSAPKIELLVL
RKGFEFYIKAR
>Mature_331_residues
MLCKALIVLLFFVNGLGAYDFKHCQAFFQKASLQKGGVALKELPKGVYLYYSKTYPKHAKVIKSDPFIGLYLLQSAPSAY
AYTLRDLDKNALTRPMASVGANQVTEVQLLSKQKGYNHYARISQAIQKNGVISNICYQMLGLGVGGNGFIETKFIKRFLS
QKEPYYGDIGVRLEEYHKRLVVVQFDPFFPKNPFLKNDEIIAINDQKIHSLAEFEWVVSNLKYQSLVRVKIKRNRQIKEV
TLKVNKRYGGFLLKDTFLERYNIALDERFVITKIGSHLPKGLDFLKLGDRILWVNRKDVAFNQKALREALSAPKIELLVL
RKGFEFYIKAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38033; Mature: 38033

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCKALIVLLFFVNGLGAYDFKHCQAFFQKASLQKGGVALKELPKGVYLYYSKTYPKHAK
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEEECCCCCHHH
VIKSDPFIGLYLLQSAPSAYAYTLRDLDKNALTRPMASVGANQVTEVQLLSKQKGYNHYA
EECCCCCEEEEEECCCCCHHHHHHHHCCHHHHHCCHHHCCCCHHHHHHHHHHHCCCHHHH
RISQAIQKNGVISNICYQMLGLGVGGNGFIETKFIKRFLSQKEPYYGDIGVRLEEYHKRL
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCHHHHCCEE
VVVQFDPFFPKNPFLKNDEIIAINDQKIHSLAEFEWVVSNLKYQSLVRVKIKRNRQIKEV
EEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHEEEEECCCCCEEEE
TLKVNKRYGGFLLKDTFLERYNIALDERFVITKIGSHLPKGLDFLKLGDRILWVNRKDVA
EEEEECCCCCEEHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCHHHHHCCEEEEEECCCCC
FNQKALREALSAPKIELLVLRKGFEFYIKAR
CCHHHHHHHHCCCCEEEEEEECCCEEEEEEC
>Mature Secondary Structure
MLCKALIVLLFFVNGLGAYDFKHCQAFFQKASLQKGGVALKELPKGVYLYYSKTYPKHAK
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEEECCCCCHHH
VIKSDPFIGLYLLQSAPSAYAYTLRDLDKNALTRPMASVGANQVTEVQLLSKQKGYNHYA
EECCCCCEEEEEECCCCCHHHHHHHHCCHHHHHCCHHHCCCCHHHHHHHHHHHCCCHHHH
RISQAIQKNGVISNICYQMLGLGVGGNGFIETKFIKRFLSQKEPYYGDIGVRLEEYHKRL
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCHHHHCCEE
VVVQFDPFFPKNPFLKNDEIIAINDQKIHSLAEFEWVVSNLKYQSLVRVKIKRNRQIKEV
EEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHEEEEECCCCCEEEE
TLKVNKRYGGFLLKDTFLERYNIALDERFVITKIGSHLPKGLDFLKLGDRILWVNRKDVA
EEEEECCCCCEEHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCHHHHHCCEEEEEECCCCC
FNQKALREALSAPKIELLVLRKGFEFYIKAR
CCHHHHHHHHCCCCEEEEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA