Click here to switch to the map view.

The map label for this gene is ybaB [C]

Identifier: 109946682

GI number: 109946682

Start: 46652

End: 46945

Strand: Direct

Name: ybaB [C]

Synonym: Hac_0048

Alternate gene names: 109946682

Gene position: 46652-46945 (Clockwise)

Preceding gene: 109946681

Following gene: 109946683

Centisome position: 3.0

GC content: 36.73

Gene sequence:

>294_bases
ATGGATTTTAGTCAATTGAGTGGGTTATTAGACGGCGTGAAAAAAGAATTTTCTCAATTAGAAGAAAAGAATAAAGATAC
GATTTACACTTCCAAAAGCGGTGGGGGAATGGTGAGCGTGAGTTTTAATGGGGTGGGGGAGTTAGTGGATTTGCAAATTG
ATGACAGCCTGTTAGAAGATAAAGAAGCGATGCAAATCTATTTGATGAGCGCTTTGAATGATGGGTATAAATCCGTAGAA
GAAAACAGAAAAAATTTAGCTTTTAGTATGTTGGGGAATTTTGCCAAATTGTGA

Upstream 100 bases:

>100_bases
GCTTATGCGAGCATGAATGAAGATGAAATGAATGTGCACAAGCCGTGCATTGTGTTAGTCAATGAAAAAAATGAAATTTT
AGAAAAATAAAAGGTTAGAT

Downstream 100 bases:

>100_bases
TGCTTTGCAAAGCCCTTATTGTTCTATTGTTTTTTGTGAATGGCTTAGGGGCTTATGATTTCAAGCATTGTCAGGCATTT
TTTCAAAAAGCCAGTCTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MDFSQLSGLLDGVKKEFSQLEEKNKDTIYTSKSGGGMVSVSFNGVGELVDLQIDDSLLEDKEAMQIYLMSALNDGYKSVE
ENRKNLAFSMLGNFAKL

Sequences:

>Translated_97_residues
MDFSQLSGLLDGVKKEFSQLEEKNKDTIYTSKSGGGMVSVSFNGVGELVDLQIDDSLLEDKEAMQIYLMSALNDGYKSVE
ENRKNLAFSMLGNFAKL
>Mature_97_residues
MDFSQLSGLLDGVKKEFSQLEEKNKDTIYTSKSGGGMVSVSFNGVGELVDLQIDDSLLEDKEAMQIYLMSALNDGYKSVE
ENRKNLAFSMLGNFAKL

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004401 [H]

Pfam domain/function: PF02575 DUF149 [H]

EC number: NA

Molecular weight: Translated: 10723; Mature: 10723

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSQLSGLLDGVKKEFSQLEEKNKDTIYTSKSGGGMVSVSFNGVGELVDLQIDDSLLED
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCEEEEEECHHHHHH
KEAMQIYLMSALNDGYKSVEENRKNLAFSMLGNFAKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDFSQLSGLLDGVKKEFSQLEEKNKDTIYTSKSGGGMVSVSFNGVGELVDLQIDDSLLED
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCEEEEEECHHHHHH
KEAMQIYLMSALNDGYKSVEENRKNLAFSMLGNFAKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]