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The map label for this gene is omp1 fragment 3

Identifier: 109946671

GI number: 109946671

Start: 37807

End: 38277

Strand: Reverse

Name: omp1 fragment 3

Synonym: Hac_0036

Alternate gene names: NA

Gene position: 38277-37807 (Counterclockwise)

Preceding gene: 109946672

Following gene: 109946670

Centisome position: 2.46

GC content: 42.89

Gene sequence:

>471_bases
ATGATCGCTAACGCCAATAAAGTCGTGAACCAAACTAAAGCCCTTAATAGCACACAAGAAAGTCAAATCCAAAACCTAGG
CCAATTCAACCCTTTCAACACTAACGAGACAGCATTCGCTGACAAAATGCTCCAAAAACGCTTGATATCCCAATCAGCGC
TCCTCAATCTCGCCACTCAAGTGGCGAATAATTTCAAAAGCATCAATTCCTTGCAACAACACTACATGCAAACATGCCTA
GGAGGCGTTGGTGGGGTTGGTCATAACGCTAGGTATTCAAGCTGCGCAAAGCTTGCATCCACTTTAGGCACTTTAGAAAA
CACCGTGGCTTATTATGGCGATCAGATCAATTGGGCTGAAACCATCGCTAACACGCTACTCAATTTCTCTAACAGCGTTG
ATCCTTTGCAAAACACCTATAATTTCAACCAAAACGCTTACAATCAAATGCAAGTGCTGCACAACAATTAG

Upstream 100 bases:

>100_bases
CATGGCTAGAAACAAGCGATGGCGGTAAAGCATTTGGATAAACTAGCACGAGTGGGGCAGTGTGTAGTATCTTTAAAAAC
ACTTCAGATAGCATCACAAC

Downstream 100 bases:

>100_bases
CCAACAACCCTTTTAGAAGCGTAGTAAGGATTAGCTCTCAAAACAACAACGGTGCGATGAATGGGATCGGTTTTCAAGTG
GGCTATAAGCAATTTTTTGG

Product: outer membrane protein 1 fragment 3

Products: NA

Alternate protein names: Outer Membrane Protein HopZ

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MIANANKVVNQTKALNSTQESQIQNLGQFNPFNTNETAFADKMLQKRLISQSALLNLATQVANNFKSINSLQQHYMQTCL
GGVGGVGHNARYSSCAKLASTLGTLENTVAYYGDQINWAETIANTLLNFSNSVDPLQNTYNFNQNAYNQMQVLHNN

Sequences:

>Translated_156_residues
MIANANKVVNQTKALNSTQESQIQNLGQFNPFNTNETAFADKMLQKRLISQSALLNLATQVANNFKSINSLQQHYMQTCL
GGVGGVGHNARYSSCAKLASTLGTLENTVAYYGDQINWAETIANTLLNFSNSVDPLQNTYNFNQNAYNQMQVLHNN
>Mature_156_residues
MIANANKVVNQTKALNSTQESQIQNLGQFNPFNTNETAFADKMLQKRLISQSALLNLATQVANNFKSINSLQQHYMQTCL
GGVGGVGHNARYSSCAKLASTLGTLENTVAYYGDQINWAETIANTLLNFSNSVDPLQNTYNFNQNAYNQMQVLHNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17225; Mature: 17225

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIANANKVVNQTKALNSTQESQIQNLGQFNPFNTNETAFADKMLQKRLISQSALLNLATQ
CCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VANNFKSINSLQQHYMQTCLGGVGGVGHNARYSSCAKLASTLGTLENTVAYYGDQINWAE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
TIANTLLNFSNSVDPLQNTYNFNQNAYNQMQVLHNN
HHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MIANANKVVNQTKALNSTQESQIQNLGQFNPFNTNETAFADKMLQKRLISQSALLNLATQ
CCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VANNFKSINSLQQHYMQTCLGGVGGVGHNARYSSCAKLASTLGTLENTVAYYGDQINWAE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
TIANTLLNFSNSVDPLQNTYNFNQNAYNQMQVLHNN
HHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA