Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 109896664

GI number:

Start: 389502

End: 391949

Strand: Direct

Name: Not Available

Synonym: Patl_0334

Alternate gene names: NA

Gene position: NA

Preceding gene: 109896661

Following gene: 109896665

Centisome position: NA

GC content: NA

Gene sequence:

>2448_bases
ATGAAAATGACACCTATTGCCTGTGCAGTTTCGATACTTTTTGCCACCCCATTAATGGCCCAAGAAGCAAATACGGAAAC
CCCTGACAATGATGAGTATGAAAATATTATTGTTACCGGTTCTAGTGTTGCACGTACTGAAGCAGACACCCCAGCCAAAA
CGACCTTGATTGGTAAAGACCAAATCGCCAACACAGGGTTTTCGAGTCAAGCTGACATACTCATGAGTGTTCCCGGTATT
AAAGTAGAGGGGGGCGGGGGTGAAGTCGCAACCAACGCATTCGTTCGTGGTTTACCTTCTGGTGGTCAATTTCAGTTTAC
TCCCCTTAATTACGACGGCATGCCGGCATTCCAATCTGGCATGACATCGTCAGCACAAGATGTTTACTACCGTCCTGACA
TCGGCATAGAAAGAGTCGAGTACGTGGGTGGTGGTGTGTCTAACTTGTTTGGCCCAGGTTCAGTGGCCGGCATTATCAAC
TATATTTCGCGTACGGGCAGTGACGATCCAGAAACCACAGTGCAGGTCGAAATCGCCGAAGAAGGCCGAGTTAGAACAGA
CTTCTATAATAGCGGCGCGTTATCCAGTGATGAAAACTTGTATTACGCGATCTCTGGTTTCTATCGTTACGATGAAGGCC
CGTTAGAAACAGGCTTAGAAACCAAGGGTTACCAGCTTAGAGGTAACATTCGTAAAGAATTCGACGATGGCCATATTACC
TTCCACGGTCAAATGATTGATGACCAAGTGCAGTTTTTCCTTCCTTTACCCCTTGAAGGTGACAGCCGCGAGCGTTTAAC
CGGTAATGATGGCGAAACCGTCTATGTGGCACAAACCGTTGCCGCAGCCGATTTACGTTACGACACAGCCGATGGCACCT
ATGAATCACCTATTCGAAATGGTGTGCTCACAGAGGGTGGTTCATTCGGTGTTGATTTTGAGAAAGAGTTAACTGACAAC
TGGCGCTTAGCGGGTAAGGCAAAAGTCGCCAGCTATGACCACCAGTTCAACCTATTCTTGGATGGCGACGGCATTGCCAA
CACGCCAGAGACGCAAGAAGGTTACGCGAATAACCTAGGTCGCACCGCAAACGGTGACGTTTTAAGCTCACTAGGCAGCG
CTAACTATACATGGTCTGAAACCGGCAATGCGTTACCAGAAGATTACTTGTTATTCGGTAACCGCTTATTAGATCGCCAG
CGCGACGGTGATTTCTTCAGTACTGAATTCAACTTAACAGGTGACATAGAGGCAGGCGGATTCGACCATACCGTGAATAT
CGGTACCTTCTTCATCAACTCATCGCAGATGGATTACAACATTATCTCCAGCTATTTAGCCGATTTTAGCAATGGCGACA
GCGCGCGCTTGGTTGACTTGTCTTTCACCAATGAAGCGGGTGATACAGTGCAATATTCGAAAAACGGTATTGTCGGGCCA
GGCACAAGTTACACCAATAAAGATTTAACCAGTAAGCGTATGGCGTTTTACGTAACGGACCAGATGGAAAATGACCAATG
GGCACTCGACGTCGGTATGCGTGTTGAACGTGCTGAAGGGACAACTAAATCTGAAGGCAGTGAAGTGGTTGTGGTAAATG
ACGACCCATCATTAGCACCGAACTTACAAGTTAACACCACAGGTAACGGGCGTTTTACTTACGGTGAAGTGGCTACAACC
GAAGCGGCATTCTCGGCGGCTGTGTTGTACAAAATGGATGATCAAGACCTGAACCTATACGCGAATGCGTCAACCGGTTA
TTTCTTCCCGCAAATCAGAAGTATCACGTTTAACGAAAACGGTGAGCCACAAAGCTACGAGGGCGAAGATATTACCCTGG
GCGCGATTGGTTTTAAGTATTTCCCAGAAGATTTATACATAGATGCGTCATTGTTCATAGCGAACTTGGATAATCGCCGT
TCAGTGGACTTCGAAAATGATGGCTCAGGCGGATTACTAGAAGTGGTGAAGCAGCAATCAACGGAAACCACAGGCGCTGA
AGTGATTACTCGCTGGAATATGACAGACGAAGTGATCCTTGAAGGTAACGTGACCTATCAAGACGCTGAATTTAGCGAAG
GCGGTAACGTAGGTAAGCAACCAAGAAGACAGCCTGAGTTCTCGGGTAATCTTGCGGTTTCTTATAACAATGGCTTTGTT
GATGCGCGCTTAGGTTTGAGTTACTTCGGTGATGCTTACGCGAACGACGATAACTCAGTCGAACTGGATAGCCACACTAT
TGCGACCTTAAGTGCCGGTTATTCTTGGGAGCTAAATAACGATCAGCAAATTCGTGTCGGCGTCAGTGTGTGGAACTTGT
TCGACACTGACGGCATTACCGAAGGCTCACCTCGTCAAGGTAACAGCCAAGTGTCGGGTGGCGAGTTCTTCGTGGGCCGC
CCAGTGCTACCACGCAGAGTGAGCTTAACAGCACGATATGATTTCTAA

Upstream 100 bases:

>100_bases
AAATTAATAACATTAAATGAACGTTCGCCACATTAATAACGAATAAGTGACGAATACACACCATTGACATTGACCATCTT
AAAAAGAGTTGGAGAACACC

Downstream 100 bases:

>100_bases
AGTAAGTTTGTGTGTACTGGCGCTTCCTTGCGCCATTTAGGTTGAATAGCTTGCTCACTGAAAGGTATCTCAGTGAGCAA
CTATTCACCGTTCTTTCAAT

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>815_residues
MKMTPIACAVSILFATPLMAQEANTETPDNDEYENIIVTGSSVARTEADTPAKTTLIGKDQIANTGFSSQADILMSVPGI
KVEGGGGEVATNAFVRGLPSGGQFQFTPLNYDGMPAFQSGMTSSAQDVYYRPDIGIERVEYVGGGVSNLFGPGSVAGIIN
YISRTGSDDPETTVQVEIAEEGRVRTDFYNSGALSSDENLYYAISGFYRYDEGPLETGLETKGYQLRGNIRKEFDDGHIT
FHGQMIDDQVQFFLPLPLEGDSRERLTGNDGETVYVAQTVAAADLRYDTADGTYESPIRNGVLTEGGSFGVDFEKELTDN
WRLAGKAKVASYDHQFNLFLDGDGIANTPETQEGYANNLGRTANGDVLSSLGSANYTWSETGNALPEDYLLFGNRLLDRQ
RDGDFFSTEFNLTGDIEAGGFDHTVNIGTFFINSSQMDYNIISSYLADFSNGDSARLVDLSFTNEAGDTVQYSKNGIVGP
GTSYTNKDLTSKRMAFYVTDQMENDQWALDVGMRVERAEGTTKSEGSEVVVVNDDPSLAPNLQVNTTGNGRFTYGEVATT
EAAFSAAVLYKMDDQDLNLYANASTGYFFPQIRSITFNENGEPQSYEGEDITLGAIGFKYFPEDLYIDASLFIANLDNRR
SVDFENDGSGGLLEVVKQQSTETTGAEVITRWNMTDEVILEGNVTYQDAEFSEGGNVGKQPRRQPEFSGNLAVSYNNGFV
DARLGLSYFGDAYANDDNSVELDSHTIATLSAGYSWELNNDQQIRVGVSVWNLFDTDGITEGSPRQGNSQVSGGEFFVGR
PVLPRRVSLTARYDF

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA