| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is psaI
Identifier: 109150028
GI number: 109150028
Start: 2309433
End: 2309573
Strand: Direct
Name: psaI
Synonym: Ava_1851a
Alternate gene names: 109150028
Gene position: 2309433-2309573 (Clockwise)
Preceding gene: 75908072
Following gene: 75908079
Centisome position: 36.28
GC content: 41.84
Gene sequence:
>141_bases ATGGCAACTGCATTTTTGCCTTCTATCTTGGCTGACGCTTCTTTCTTGTCCTCTATCTTCGTTCCCGTAATCGGTTGGGT TGTACCAATTGCCACCTTCTCGTTTCTATTTTTATATATTGAAGGCGAAGACGTTGCTTAA
Upstream 100 bases:
>100_bases GCATGGGGCTGTGTTAAAAATCTTGAGAATTTAAAAAAATTGACTGAATTTGCAGTAAGCTCGTCTTGAATTGTAGTGTG ATTTAAGAGGAAAACTTACT
Downstream 100 bases:
>100_bases TCCAGGCATATGTAACGGGTAATATGTAATTTGATACTAACTTAAGTTGTTAGTAATCAATTCAGGAACTGGTAATGGGT AATGGGTAATGGGTAGTGAG
Product: photosystem I reaction center subunit VIII
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 46; Mature: 45
Protein sequence:
>46_residues MATAFLPSILADASFLSSIFVPVIGWVVPIATFSFLFLYIEGEDVA
Sequences:
>Translated_46_residues MATAFLPSILADASFLSSIFVPVIGWVVPIATFSFLFLYIEGEDVA >Mature_45_residues ATAFLPSILADASFLSSIFVPVIGWVVPIATFSFLFLYIEGEDVA
Specific function: May help in the organization of the psaL subunit
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cellular thylakoid membrane; Single-pass membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the psaI family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PSAI_ANAVT (P23079)
Other databases:
- EMBL: X66864 - EMBL: CP000117 - PIR: S28008 - RefSeq: YP_654170.1 - ProteinModelPortal: P23079 - SMR: P23079 - STRING: P23079 - GeneID: 4126831 - GenomeReviews: CP000117_GR - eggNOG: NOG134278 - HOGENOM: HBG139849 - ProtClustDB: CLSK480819 - GO: GO:0015979 - HAMAP: MF_00431 - InterPro: IPR001302 - TIGRFAMs: TIGR03052
Pfam domain/function: PF00796 PSI_8; SSF81540 PSI_su8
EC number: NA
Molecular weight: Translated: 4967; Mature: 4836
Theoretical pI: Translated: 3.30; Mature: 3.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xc7c71f4)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATAFLPSILADASFLSSIFVPVIGWVVPIATFSFLFLYIEGEDVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCH >Mature Secondary Structure ATAFLPSILADASFLSSIFVPVIGWVVPIATFSFLFLYIEGEDVA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1463834; 1908790