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The map label for this gene is 108812668

Identifier: 108812668

GI number: 108812668

Start: 2815550

End: 2817898

Strand: Reverse

Name: 108812668

Synonym: YPN_2507

Alternate gene names: NA

Gene position: 2817898-2815550 (Counterclockwise)

Preceding gene: 108812669

Following gene: 108812667

Centisome position: 62.14

GC content: 56.49

Gene sequence:

>2349_bases
ATGAATACCTTTCTCCCGACTATTCGGTTTGACCATAGCCACCACAAACTGGTGGTCCGCGACAGCACCGCCGCCGTTGA
TGTGCTGGGCTTTGAAGGCCATGAAAGCCTGAGCCAGCCGTTCTGTTACGACATCCAATTCACCAGCGCCGACAAGGCGA
TTGGCCCGGCGACCATGCTGATGCACGACGCGTCACTGACATTGGCGGCCCCGATGGCCGAAGCTTTTGGCGTGACGGTT
CAGCAGACCCAGCGGGTGATCCAAGGGGTGGTCACCGGATTTAAACGCCTGTCGGCCTCGAAAGAGGAATGCCGCTACGA
ACTGAGCCTGCAACCGCGCCTGGCCTTGTTATCGCGCAGCCATCAGAACGGGATATATCAGGACATGTCGGTGCCGCAGA
TTGTGGAAAAAATTCTGCGTGAGCGCCATGACATGCGCGGTCAGGATTTTGTCTTCACGCTGGCCCGCGAGTACCCACGC
CGCGAGCAGGTAATGCAATACGGCGAGGATGACCTGACCTTTATCCGCCGCCTGCTGGCCGAGGTGGGGATCTGGTTTCG
TTTTACCGCCGATCCCAAACTCAATATTGATGTGGTGGAGTTTTACGACGACCAGCGCTTCTATCAGCAAGGACTGACGC
TACAGGCGGTGCCGCCTTCGGGGATGCACGACAGCGGGATGGAATCGGTCTGGGACCTGTCCAGCGCCCATCAGGTGGTG
GAAAAATCGGTCAGTACCGGCGATTACAACTACCGCACCGCCACTGCCGACCTGACCGCCGGGGCCGACATCACGCGCGG
CGATACCACCACCTACGGCGAAGCCTATCATTACGCCGATAACTATCTGACCGCAGGCAGCGAAGGGCGCGAGCCGGAAA
GTGAAAGTGGGGCCTTTTATGCCCGTCTGCGCCATGAACGTTACCTCAATAATCAGGCGCGCTTCGCCGGGGTGGCCAAT
GCGGCGGCACTGGCACCGGGTCAGGAACTGAACGTCACCGGCAACGACGTGCCAGCACAGTTTGGTAAAGGGGTGATAAT
CACCCGCATCACCAGCCATGCCCGCCGCGACCGCAGCTATGAAGTACATTTTGAAGCCATTCCTTACTCCGAGGATTATT
GCTTCCGTCCGGCGCTGATCCGCAAGCCGACCATGGCCGGGACCTTGCCGGCGCGGGTGACCAGTACCACTGCGAACGAC
ACTTATGGTCATATCGACAAAGACGGGCGCTACCGTGTCAACCTGATGTTCGACCGTGACAGTTGGGAGTCGGGTTACGA
AAGCTTGTGGGTCCGTCAGGCCCGCCCGTATGCGGGTGACAGCTACGGCCTGCACCTGCCGCTGCTGGCAGGCACCGAAG
TGGCGATCGCGTTTGAAGACGGCAACCCGGACCGGCCGTATATCGCCTATGTGCTACACGACTCGGCGCACGGCGACCAT
GTCACCATCAGCAACTACAAACGCAACGTACTGCGTACTCCGTCGAATAACAAACTGCGCCTGGAGGATGAACGGGGTAA
AGAGCACATCAAGCTCAGCACCGAATATGGCGGCAAAAGCCAACTGAATCTGGGGCATTTGGTTGATAACGAGAAACAGC
CTCGGGGTGAGGGTTTTGAGCTGCGCACCGACAGTTTTGGTGTATTACGGGCAGAAAAAGGCCTCTTTATCACTGCCGAC
GGACAGGCCAAAGCACAGGGGCAGGTGCTGGAGATGCAACCGGCTATCAGCCTGTTGAAAAGTGCGCAGGAACAGATGGA
GGCCATCTCCGCGGATGCACAAACCGCCACCGCCAGTCCGGCCGACCTACAGGTACAAATCAGTCTGTTGCAGCAAAATC
TCACTGAACTGAAACAAGCTGTCCTGTTACTGAGTGCGCCAAAGGGGATCGCGTTGAGTAGCGGGGAGCATCTGCAAATG
AGTGCCAGCGATAACCTGATTGCCACCGCCGGTAAAAATGCCGACGTCAGCGTCGCGAAAAATTTCTTTATCGGCGTAGG
CAATACCCTAAGTATCTTCGTCAGAAAGCTGGGGATGAAACTAATAGCCAATCAGGGGCCGATAACAGTCCAGGCGCAGA
ATGATCTAATGGAGTTATTGGCGCGTAAAGCGATCACCATTACCAGCACCGAGGATGAGATAAAAATCACCGCCAAGAAG
AGGATCACGCTGAATGCGGGAGGCAGTTATATCACGCTGGATGAGAATCGGATCGAGTCAGGAACGGCGGGGGAATATTT
GACCAAAGCAGGGTATTACGGGCGGTTAGATAAGGCCAAACTCCCAACTGAATTTCCAGCCTTAGCCGCTAAAACTGAAG
ACCCCATTAAACGTTGGCTATTCTCTTAA

Upstream 100 bases:

>100_bases
AGCTGTTAAGCCGCATGAGCGAGCAACAGCGCACCACCTCGCTGACGCTGGGCTGGCATGAAGAAGATGGCATCACGCTG
ACATTTGAGGGCGAATAAAA

Downstream 100 bases:

>100_bases
CAGGACGTTAAAAATATGATTATCAGCCCTTTATTTTTAAAAGATAAGTCCAACTCAGAAGACGATGCTTCCTGGGTCTC
CAGAATGATGCATGTAGATC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VGR-Related Protein; Rhs Element Vgr Family Protein; Vgr-Related Protein; VGR-Like Protein; Rhs-Family Protein; Rhs Family Protein; VgrG Protein; Rhs Element Vgr Related Protein; Vgr Related Protein; Replication/Virulence Associated Protein; Type VI Secretion System Rhs Element Vgr Protein; Rhs Element Vgr Family; VGR-Related Type VI Secretion System Protein; Rhs Accessory Genetic Element; Rhs Element Protein VgrE

Number of amino acids: Translated: 782; Mature: 782

Protein sequence:

>782_residues
MNTFLPTIRFDHSHHKLVVRDSTAAVDVLGFEGHESLSQPFCYDIQFTSADKAIGPATMLMHDASLTLAAPMAEAFGVTV
QQTQRVIQGVVTGFKRLSASKEECRYELSLQPRLALLSRSHQNGIYQDMSVPQIVEKILRERHDMRGQDFVFTLAREYPR
REQVMQYGEDDLTFIRRLLAEVGIWFRFTADPKLNIDVVEFYDDQRFYQQGLTLQAVPPSGMHDSGMESVWDLSSAHQVV
EKSVSTGDYNYRTATADLTAGADITRGDTTTYGEAYHYADNYLTAGSEGREPESESGAFYARLRHERYLNNQARFAGVAN
AAALAPGQELNVTGNDVPAQFGKGVIITRITSHARRDRSYEVHFEAIPYSEDYCFRPALIRKPTMAGTLPARVTSTTAND
TYGHIDKDGRYRVNLMFDRDSWESGYESLWVRQARPYAGDSYGLHLPLLAGTEVAIAFEDGNPDRPYIAYVLHDSAHGDH
VTISNYKRNVLRTPSNNKLRLEDERGKEHIKLSTEYGGKSQLNLGHLVDNEKQPRGEGFELRTDSFGVLRAEKGLFITAD
GQAKAQGQVLEMQPAISLLKSAQEQMEAISADAQTATASPADLQVQISLLQQNLTELKQAVLLLSAPKGIALSSGEHLQM
SASDNLIATAGKNADVSVAKNFFIGVGNTLSIFVRKLGMKLIANQGPITVQAQNDLMELLARKAITITSTEDEIKITAKK
RITLNAGGSYITLDENRIESGTAGEYLTKAGYYGRLDKAKLPTEFPALAAKTEDPIKRWLFS

Sequences:

>Translated_782_residues
MNTFLPTIRFDHSHHKLVVRDSTAAVDVLGFEGHESLSQPFCYDIQFTSADKAIGPATMLMHDASLTLAAPMAEAFGVTV
QQTQRVIQGVVTGFKRLSASKEECRYELSLQPRLALLSRSHQNGIYQDMSVPQIVEKILRERHDMRGQDFVFTLAREYPR
REQVMQYGEDDLTFIRRLLAEVGIWFRFTADPKLNIDVVEFYDDQRFYQQGLTLQAVPPSGMHDSGMESVWDLSSAHQVV
EKSVSTGDYNYRTATADLTAGADITRGDTTTYGEAYHYADNYLTAGSEGREPESESGAFYARLRHERYLNNQARFAGVAN
AAALAPGQELNVTGNDVPAQFGKGVIITRITSHARRDRSYEVHFEAIPYSEDYCFRPALIRKPTMAGTLPARVTSTTAND
TYGHIDKDGRYRVNLMFDRDSWESGYESLWVRQARPYAGDSYGLHLPLLAGTEVAIAFEDGNPDRPYIAYVLHDSAHGDH
VTISNYKRNVLRTPSNNKLRLEDERGKEHIKLSTEYGGKSQLNLGHLVDNEKQPRGEGFELRTDSFGVLRAEKGLFITAD
GQAKAQGQVLEMQPAISLLKSAQEQMEAISADAQTATASPADLQVQISLLQQNLTELKQAVLLLSAPKGIALSSGEHLQM
SASDNLIATAGKNADVSVAKNFFIGVGNTLSIFVRKLGMKLIANQGPITVQAQNDLMELLARKAITITSTEDEIKITAKK
RITLNAGGSYITLDENRIESGTAGEYLTKAGYYGRLDKAKLPTEFPALAAKTEDPIKRWLFS
>Mature_782_residues
MNTFLPTIRFDHSHHKLVVRDSTAAVDVLGFEGHESLSQPFCYDIQFTSADKAIGPATMLMHDASLTLAAPMAEAFGVTV
QQTQRVIQGVVTGFKRLSASKEECRYELSLQPRLALLSRSHQNGIYQDMSVPQIVEKILRERHDMRGQDFVFTLAREYPR
REQVMQYGEDDLTFIRRLLAEVGIWFRFTADPKLNIDVVEFYDDQRFYQQGLTLQAVPPSGMHDSGMESVWDLSSAHQVV
EKSVSTGDYNYRTATADLTAGADITRGDTTTYGEAYHYADNYLTAGSEGREPESESGAFYARLRHERYLNNQARFAGVAN
AAALAPGQELNVTGNDVPAQFGKGVIITRITSHARRDRSYEVHFEAIPYSEDYCFRPALIRKPTMAGTLPARVTSTTAND
TYGHIDKDGRYRVNLMFDRDSWESGYESLWVRQARPYAGDSYGLHLPLLAGTEVAIAFEDGNPDRPYIAYVLHDSAHGDH
VTISNYKRNVLRTPSNNKLRLEDERGKEHIKLSTEYGGKSQLNLGHLVDNEKQPRGEGFELRTDSFGVLRAEKGLFITAD
GQAKAQGQVLEMQPAISLLKSAQEQMEAISADAQTATASPADLQVQISLLQQNLTELKQAVLLLSAPKGIALSSGEHLQM
SASDNLIATAGKNADVSVAKNFFIGVGNTLSIFVRKLGMKLIANQGPITVQAQNDLMELLARKAITITSTEDEIKITAKK
RITLNAGGSYITLDENRIESGTAGEYLTKAGYYGRLDKAKLPTEFPALAAKTEDPIKRWLFS

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86750; Mature: 86750

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTFLPTIRFDHSHHKLVVRDSTAAVDVLGFEGHESLSQPFCYDIQFTSADKAIGPATML
CCCCCCEEEECCCCCEEEEECCCCEEEEEECCCCHHHCCCEEEEEEECCCCCCCCCCEEE
MHDASLTLAAPMAEAFGVTVQQTQRVIQGVVTGFKRLSASKEECRYELSLQPRLALLSRS
EECCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHCEEEECCCCHHHHHHCC
HQNGIYQDMSVPQIVEKILRERHDMRGQDFVFTLAREYPRREQVMQYGEDDLTFIRRLLA
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCHHHHHHCCCHHHHHHHHHHH
EVGIWFRFTADPKLNIDVVEFYDDQRFYQQGLTLQAVPPSGMHDSGMESVWDLSSAHQVV
HCCEEEEEECCCCCCEEEEEEECCHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHH
EKSVSTGDYNYRTATADLTAGADITRGDTTTYGEAYHYADNYLTAGSEGREPESESGAFY
HHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCH
ARLRHERYLNNQARFAGVANAAALAPGQELNVTGNDVPAQFGKGVIITRITSHARRDRSY
HHHHHHHHHCCCHHHHCCCCHHHCCCCCEEECCCCCCCHHHCCCEEEEEEHHHHHCCCCE
EVHFEAIPYSEDYCFRPALIRKPTMAGTLPARVTSTTANDTYGHIDKDGRYRVNLMFDRD
EEEEEEECCCCCCCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECC
SWESGYESLWVRQARPYAGDSYGLHLPLLAGTEVAIAFEDGNPDRPYIAYVLHDSAHGDH
CCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCEEEEEEECCCCCCE
VTISNYKRNVLRTPSNNKLRLEDERGKEHIKLSTEYGGKSQLNLGHLVDNEKQPRGEGFE
EEECCCCCCEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCEEHHHCCCCCCCCCCCEE
LRTDSFGVLRAEKGLFITADGQAKAQGQVLEMQPAISLLKSAQEQMEAISADAQTATASP
EECCCCEEEEECCCEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
ADLQVQISLLQQNLTELKQAVLLLSAPKGIALSSGEHLQMSASDNLIATAGKNADVSVAK
CCEEEEHHHHHHHHHHHHHHHEEEECCCCCEECCCCEEEEECCCCEEEECCCCCCCEEEC
NFFIGVGNTLSIFVRKLGMKLIANQGPITVQAQNDLMELLARKAITITSTEDEIKITAKK
EEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCEEEEECCCCCEEEEEEE
RITLNAGGSYITLDENRIESGTAGEYLTKAGYYGRLDKAKLPTEFPALAAKTEDPIKRWL
EEEEECCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHH
FS
CC
>Mature Secondary Structure
MNTFLPTIRFDHSHHKLVVRDSTAAVDVLGFEGHESLSQPFCYDIQFTSADKAIGPATML
CCCCCCEEEECCCCCEEEEECCCCEEEEEECCCCHHHCCCEEEEEEECCCCCCCCCCEEE
MHDASLTLAAPMAEAFGVTVQQTQRVIQGVVTGFKRLSASKEECRYELSLQPRLALLSRS
EECCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHCEEEECCCCHHHHHHCC
HQNGIYQDMSVPQIVEKILRERHDMRGQDFVFTLAREYPRREQVMQYGEDDLTFIRRLLA
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCHHHHHHCCCHHHHHHHHHHH
EVGIWFRFTADPKLNIDVVEFYDDQRFYQQGLTLQAVPPSGMHDSGMESVWDLSSAHQVV
HCCEEEEEECCCCCCEEEEEEECCHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHH
EKSVSTGDYNYRTATADLTAGADITRGDTTTYGEAYHYADNYLTAGSEGREPESESGAFY
HHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCH
ARLRHERYLNNQARFAGVANAAALAPGQELNVTGNDVPAQFGKGVIITRITSHARRDRSY
HHHHHHHHHCCCHHHHCCCCHHHCCCCCEEECCCCCCCHHHCCCEEEEEEHHHHHCCCCE
EVHFEAIPYSEDYCFRPALIRKPTMAGTLPARVTSTTANDTYGHIDKDGRYRVNLMFDRD
EEEEEEECCCCCCCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECC
SWESGYESLWVRQARPYAGDSYGLHLPLLAGTEVAIAFEDGNPDRPYIAYVLHDSAHGDH
CCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCEEEEEEECCCCCCE
VTISNYKRNVLRTPSNNKLRLEDERGKEHIKLSTEYGGKSQLNLGHLVDNEKQPRGEGFE
EEECCCCCCEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCEEHHHCCCCCCCCCCCEE
LRTDSFGVLRAEKGLFITADGQAKAQGQVLEMQPAISLLKSAQEQMEAISADAQTATASP
EECCCCEEEEECCCEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
ADLQVQISLLQQNLTELKQAVLLLSAPKGIALSSGEHLQMSASDNLIATAGKNADVSVAK
CCEEEEHHHHHHHHHHHHHHHEEEECCCCCEECCCCEEEEECCCCEEEECCCCCCCEEEC
NFFIGVGNTLSIFVRKLGMKLIANQGPITVQAQNDLMELLARKAITITSTEDEIKITAKK
EEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCEEEEECCCCCEEEEEEE
RITLNAGGSYITLDENRIESGTAGEYLTKAGYYGRLDKAKLPTEFPALAAKTEDPIKRWL
EEEEECCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHH
FS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA